
Microexon ID | Sl_2:23119693-23119703:- |
Species | Solanum Lycopersicum | Coordinates | 2:23119693..23119703 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGGAACTAAAG |
Microexon Amino Acid seq | GELK |
Microexon-tag DNA Seq | CGGGATGCTGAAGGCGATCCTCATTTGTTTTCATGCACTTTCTCAAAAGGGGAACTAAAGGTGACAGAGATCTACAATTTCAACCAAGATGATTTGATGACCGAAGAT |
Microexon-tag Amino Acid Seq | RDAEGDPHLFSCTFSKGELKVTEIYNFNQDDLMTED |
Microexon-tag spanning region | 23118761-23119908 |
Microexon-tag prediction score | 0.9635 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc02g021420.3.1x |
Reference Transcript ID | Solyc02g021420.3.1 |
Gene ID | Solyc02g021420.3 |
Gene Name | NA |
Transcript ID | Solyc02g021420.3.1 |
Protein ID | |
Gene ID | Solyc02g021420.3 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Solyc02g021420.3.1 MSVSMRDLDPAFQGAGQKAGIEIWRIEKLSPVPVPKSSHGKFYTGDSYIILKTSASKTGALRHDIHYWLGADTSQDEAGA SAIKTIELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPLKGGIASGFKHVEEEEYKNCLYICQGKHVVHVKEVPFARS SLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGNCDVAAIEDGKLMADAETGEFWGFFGGFAPLPRK TTRDEAKNIDTVPTRLYRVQKGQAEPVEIESLTRELLDTNGCYIVDCGIEVFVWMGRNTSLDERKTASGAADELLLGLDR PKCHVVRVIEGFETVMFRSKFDSWPQSTNVAVTEDGRGKVAALLKRQGLNVRGLMKAAPPKEEPQPYIDCTGNLQVWRVN GQQKTLLQASDQSKFYSGDCYIFQYSYPGEDKEEHLIGTWFGRQSVEEDRVSAISQAGKIVELLKFSATQARIYEGYEPL QFFVIFQSFIVFKGGLSEGYKKHLAEKELGDDTYKEDGIALFRVQGTGPDNMQSIQVEPVASSLNSSYCYILHSGSSVFT WTGNLTNSEDQELVERQLDLIKPDMQSKLQKEGAESEQFWEILGGKSEYPSEKIGRDAEGDPHLFSCTFSKGELKVTEIY NFNQDDLMTEDVFILDCHSDIYIWVGQKVENKNKMQALAIAEKFLEYDFLMEKLSHQAPIYIVMEGSEPLLFTRHFSWDS TKSAMHGDSFQRKLTLVKNGGAPPIDKPKRRTPVSYGGRSAAPEKSQRSRSVSFSPDRVRVRGRSPAFNALAATFENPNA RNLSTPPPMVRKLYPKSVTPDSAKLAPRSAAIAALTASFDKPLPAKEVIIPPSIKGSPEEPKLSTEAIISSPQGDSKENS VNNVTDEAPKPKPETIQEDVKEGETEDEEGLPIYPYDRLKTTATDPVTEIDVTKRETYLSSEEFREKFGMVKEAFYKLPK WKQNKVKMALQLF* |
CDS seq | >Solyc02g021420.3.1 ATGTCTGTTTCAATGAGAGATTTGGATCCAGCTTTTCAAGGAGCAGGCCAAAAGGCTGGAATAGAGATCTGGCGTATTGA AAAGCTAAGTCCAGTTCCTGTTCCAAAGTCATCACATGGTAAATTTTACACAGGAGACTCATATATTATTTTGAAGACCA GCGCTTCAAAAACTGGTGCCTTACGGCATGATATTCATTACTGGCTTGGTGCTGATACTAGTCAGGATGAAGCTGGTGCT TCTGCCATAAAAACTATTGAACTAGATGCAGCACTTGGTGGGCGTGCTGTTCAATATCGTGAAGTGCAAGGCCATGAAAC TGAGAAGTTCCTTTCCTATTTCAAACCATGTATAATCCCTCTAAAAGGTGGAATTGCATCTGGATTTAAGCATGTAGAGG AAGAAGAGTATAAGAACTGTTTGTACATATGCCAAGGGAAGCATGTTGTCCATGTGAAGGAGGTTCCTTTTGCTCGATCC TCACTTAATCATGATGACATCTTCATTCTTGATACCAAGTCTAAAATCTTTCAATTTAATGGTTCCAATTCCTCTATTCA AGAAAGGGCTAAAGCACTTGAAGTTGTTCAGTACATTAAAGATACGTACCACGATGGTAACTGCGATGTCGCTGCAATTG AGGATGGTAAACTGATGGCTGATGCCGAGACCGGAGAATTCTGGGGTTTTTTTGGTGGCTTTGCTCCTCTTCCAAGGAAG ACTACACGGGATGAGGCTAAAAACATTGATACTGTTCCTACTAGATTGTATAGAGTTCAAAAAGGGCAAGCAGAACCTGT TGAGATTGAGTCTTTGACAAGGGAGTTGCTAGATACGAATGGTTGCTATATAGTTGATTGTGGGATAGAAGTTTTTGTGT GGATGGGAAGAAACACTTCTCTTGATGAGAGGAAAACTGCAAGTGGGGCTGCAGATGAATTACTGCTTGGCCTTGATAGA CCAAAGTGCCATGTAGTGCGTGTAATTGAAGGGTTTGAGACTGTCATGTTCCGCTCAAAGTTTGATTCTTGGCCTCAATC AACTAATGTGGCAGTGACAGAGGATGGTAGAGGCAAGGTTGCTGCACTTCTAAAGCGTCAAGGGCTTAATGTGAGGGGCC TAATGAAAGCAGCTCCTCCAAAGGAAGAACCGCAACCATATATAGACTGCACTGGCAATTTACAGGTGTGGCGTGTGAAT GGACAGCAGAAGACTCTTCTTCAAGCATCCGATCAATCAAAGTTTTATAGTGGAGACTGTTACATATTCCAATACTCATA TCCTGGAGAAGATAAAGAGGAGCATCTCATTGGCACCTGGTTTGGGAGGCAAAGTGTTGAGGAAGACAGAGTTTCAGCAA TTTCTCAAGCAGGCAAGATAGTTGAGTTACTGAAGTTCTCAGCTACTCAGGCTCGCATTTATGAAGGTTATGAACCACTT CAATTCTTTGTCATCTTTCAGAGCTTTATCGTATTTAAGGGTGGTCTCAGTGAAGGATACAAGAAACACCTAGCAGAGAA GGAGCTTGGAGATGATACATATAAAGAGGATGGAATTGCATTGTTCCGAGTTCAGGGTACTGGACCTGATAATATGCAAT CAATTCAAGTAGAACCTGTGGCTTCATCATTGAATTCCTCATATTGCTACATATTACACAGTGGCTCCTCTGTTTTCACA TGGACTGGAAATCTTACCAACTCTGAGGATCAGGAACTTGTTGAGAGGCAACTGGATCTTATCAAGCCTGATATGCAGTC AAAATTGCAAAAAGAAGGGGCAGAATCTGAGCAATTCTGGGAAATATTGGGTGGAAAATCTGAATATCCTAGTGAGAAGA TTGGACGGGATGCTGAAGGCGATCCTCATTTGTTTTCATGCACTTTCTCAAAAGGGGAACTAAAGGTGACAGAGATCTAC AATTTCAACCAAGATGATTTGATGACCGAAGATGTGTTTATCCTTGATTGCCATTCAGATATTTATATTTGGGTTGGCCA GAAGGTGGAGAACAAGAATAAAATGCAGGCTTTAGCCATTGCCGAGAAATTCCTGGAATATGATTTTCTTATGGAGAAGC TATCCCACCAAGCTCCAATATACATTGTTATGGAAGGGAGTGAACCACTTCTCTTCACTCGTCATTTCAGTTGGGACTCC ACCAAGTCTGCTATGCATGGAGACTCATTCCAAAGAAAACTCACACTAGTGAAGAATGGAGGCGCTCCACCAATAGATAA ACCTAAAAGGAGAACACCTGTGTCATATGGTGGAAGATCTGCTGCTCCCGAGAAGTCACAGCGATCAAGGAGCGTGTCTT TCAGCCCTGACCGAGTTCGTGTTAGGGGCAGGTCTCCAGCTTTTAATGCACTAGCAGCTACTTTTGAGAATCCAAATGCA AGAAATCTGTCTACGCCTCCGCCAATGGTGAGAAAGCTTTATCCAAAATCTGTTACTCCAGATTCAGCAAAATTGGCACC CAGATCAGCAGCTATTGCAGCACTAACAGCAAGTTTCGATAAACCTTTACCTGCCAAGGAAGTCATAATACCTCCATCTA TCAAAGGGAGCCCTGAAGAACCAAAATTGAGCACGGAGGCGATAATATCAAGTCCTCAGGGCGATTCCAAGGAGAACTCA GTTAACAATGTAACGGATGAGGCTCCTAAACCGAAACCAGAAACAATACAGGAGGATGTGAAAGAGGGTGAAACTGAAGA TGAGGAAGGGCTTCCTATCTATCCTTATGACCGGCTGAAAACAACAGCAACAGATCCTGTCACTGAAATTGATGTAACCA AGCGAGAGACTTACTTGTCTTCGGAAGAGTTCAGAGAGAAATTCGGGATGGTTAAGGAGGCTTTCTACAAGTTACCCAAG TGGAAACAGAACAAGGTAAAAATGGCACTCCAGTTGTTCTGA |
Sl_2:23119693-23119703:- does not have available information here.