
Microexon ID | Sb_9:4558777-4558787:+ |
Species | Sorghum Bicolor | Coordinates | 9:4558777..4558787 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTTTGCTCAAG |
Microexon Amino Acid seq | GLLK |
Microexon-tag DNA Seq | AAGGGTTGGCCAGCAGATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTGCTCAAGGTCAAGGAGGTATTCAGCTTCTGTCAGGATGACCTGGCAACTGAAGCG |
Microexon-tag Amino Acid Seq | KGWPADPHLYACRFEQGLLKVKEVFSFCQDDLATEA |
Microexon-tag spanning region | 4558637-4558934 |
Microexon-tag prediction score | 0.868 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES17736x |
Reference Transcript ID | EES17736 |
Gene ID | SORBI_3009G048000 |
Gene Name | NA |
Transcript ID | EES17736 |
Protein ID | |
Gene ID | SORBI_3009G048000 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EES17736 MKGVDDAFLGVGDKPGLDIWCIVGSSLVPVAKPQHGKFYTGSTYIILNTTELKSGARRHNVHYWVGEEAKEDDCLMASDK AVELDAALGSSTVQYRETQGEESDKFLSYFKPCVIPVQGCFFSHLKGSGDRSNATTMFRCQGEHIARVTQIPFTRSSLDH KSVFIVDTPSKIFLFSGCNSSLQTRAKALDVVKHLKENRHLGRCEIAAIEDGKLVGDSDAGEFWNLFGGYAPIPRDLPDT VKEEPLTAPSKKLFWINKRNLVPLEAHLLDREMLNSDRSYMLDCSTEIFLWMGMTTLVSERKSSVTVLEDYMHSQGRSFN VRTFIMTEGHETVDFKLHFQHWPRNVELKLYEAGREKVAAIFKHQGYDVTEIPEDKPQQLISCNGSLKVWLVDHGCTNLL STEDQEQLYTGDCYIIRYSYVEDGKDYHLFFAWSGKNSVKDDSMLATSLMSSMADSVKGHPVVAKVFEGREPELFFSVFK SLIIFKGGRSAAYKSSVLQKNPRNGYHQKEGVALFRVQGLKHDCVQAIQVDLAASSLNSSHCYILEDNGLFLTWLGSLSS PNDHNILDLMMNKLCPMKQSLLVREGSEPDHFWIALGGRSEYSKEKRVKGWPADPHLYACRFEQGLLKVKEVFSFCQDDL ATEATLILDCDEEIYVWVGLHSDITSKEQALNIGKMFLQDGIFHSGRSIETTVYTVTEGDEPVFFTNFFNNWDNSKQSSM VGNSFERKLAVLKGVSPKLETPDRSMRRPPSRRPGVSSEPTTPEHQHQQPTARRAFGSASAGRFGRERSPAAAPPMSSPS PKSRSTSSTPTAVARRLFPASVHASEAVHVVSTGTTARRR* |
CDS seq | >EES17736 ATGAAGGGCGTCGACGATGCGTTCCTCGGCGTCGGCGACAAGCCAGGGCTGGACATTTGGTGCATTGTTGGGAGCAGTCT GGTCCCGGTTGCAAAACCCCAGCACGGCAAGTTCTACACCGGCAGCACCTACATCATACTGAATACAACCGAGCTGAAAT CCGGGGCTCGTCGACACAATGTGCATTACTGGGTTGGGGAGGAGGCCAAAGAGGACGATTGCCTCATGGCCTCAGACAAG GCTGTTGAGTTGGACGCGGCACTGGGCTCCAGCACGGTCCAGTACAGGGAAACACAGGGTGAAGAATCTGACAAGTTCTT GTCATACTTCAAACCGTGTGTCATCCCAGTACAAGGCTGCTTCTTTTCACACCTGAAAGGATCTGGTGATAGATCCAACG CGACCACGATGTTTAGATGCCAAGGAGAGCACATTGCTCGCGTCACACAAATTCCATTTACGCGGTCCTCTCTGGATCAC AAATCGGTTTTTATAGTGGACACGCCGTCGAAGATCTTCCTTTTCAGTGGCTGTAATTCTAGTTTGCAAACAAGGGCGAA AGCGTTGGATGTTGTTAAGCATCTGAAGGAGAACCGACACTTGGGCAGATGTGAGATCGCGGCAATAGAGGATGGAAAGC TTGTTGGTGATTCTGATGCTGGTGAGTTCTGGAACCTGTTTGGAGGCTATGCACCTATTCCTCGTGATTTACCTGACACA GTCAAGGAAGAGCCACTGACTGCACCATCCAAGAAACTTTTTTGGATCAATAAGAGAAACCTTGTTCCATTGGAGGCACA TTTGTTGGATAGAGAAATGCTGAACTCAGACAGAAGTTACATGCTGGACTGTAGCACTGAAATATTCTTATGGATGGGGA TGACAACACTAGTTTCGGAGAGGAAGTCATCTGTTACTGTCTTAGAAGATTATATGCACTCCCAGGGCAGGTCATTCAAT GTTCGCACATTTATAATGACAGAAGGTCATGAAACTGTTGACTTTAAGCTGCACTTTCAGCATTGGCCCAGGAATGTTGA ACTAAAGTTATATGAGGCTGGCCGAGAGAAAGTGGCAGCTATTTTCAAGCATCAGGGTTATGATGTCACAGAAATTCCAG AGGATAAACCTCAGCAGCTCATCAGTTGTAATGGCAGTCTGAAGGTGTGGTTGGTGGACCATGGCTGTACAAACCTCCTT AGCACTGAGGACCAGGAGCAGTTGTACACTGGAGACTGTTATATCATACGGTACAGCTATGTTGAAGATGGAAAAGATTA CCATCTTTTCTTTGCTTGGTCTGGTAAGAATAGTGTAAAGGACGATAGCATGTTGGCAACATCGTTAATGTCTAGCATGG CTGATTCAGTCAAAGGGCATCCAGTTGTGGCAAAAGTTTTCGAGGGCAGAGAACCAGAATTGTTTTTCTCGGTGTTCAAG TCACTAATCATATTCAAGGGGGGCAGGAGTGCTGCATATAAGAGTTCTGTTCTACAGAAAAATCCTAGAAATGGATATCA TCAGAAGGAAGGAGTCGCCCTGTTCCGTGTTCAAGGCCTTAAACATGATTGTGTGCAAGCCATTCAAGTTGATCTGGCTG CAAGTTCACTTAATTCCTCGCACTGTTATATTTTGGAAGACAATGGTTTGTTCCTTACCTGGTTAGGAAGCCTCTCTTCA CCAAACGATCATAATATTCTTGACTTGATGATGAACAAGTTGTGTCCAATGAAACAGTCCTTGCTAGTCAGAGAAGGCTC TGAGCCGGATCACTTCTGGATAGCTTTGGGAGGACGATCAGAGTACTCGAAAGAAAAGCGCGTGAAGGGTTGGCCAGCAG ATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTGCTCAAGGTCAAGGAGGTATTCAGCTTCTGTCAGGATGACCTG GCAACTGAAGCGACATTGATTCTGGACTGCGATGAAGAAATCTACGTTTGGGTTGGGCTACACTCAGACATTACATCCAA GGAGCAAGCCCTGAATATTGGCAAGATGTTCCTTCAGGATGGCATTTTTCACAGTGGAAGATCGATTGAAACGACGGTGT ATACAGTCACAGAAGGGGACGAGCCTGTATTTTTCACCAATTTCTTCAACAACTGGGACAATTCCAAGCAATCATCTATG GTTGGCAACTCATTTGAGAGGAAGCTGGCCGTCCTGAAAGGAGTCTCTCCAAAACTAGAGACACCGGACAGAAGCATGCG CAGGCCGCCATCGAGGAGGCCCGGGGTATCGTCGGAGCCGACCACGCCGGAGCACCAACACCAGCAGCCGACGGCGAGGA GGGCCTTTGGCTCCGCGTCTGCCGGGAGGTTTGGCAGGGAGCGCTCACCAGCTGCCGCACCGCCAATGTCATCGCCATCT CCCAAAAGCCGCTCGACGTCGTCCACGCCCACCGCGGTGGCACGGCGGCTCTTCCCTGCCTCGGTGCACGCATCGGAGGC CGTGCACGTCGTCTCCACGGGGACGACAGCTCGACGACGGTGA |
Sb_9:4558777-4558787:+ does not have available information here.