Microexon ID Sb_9:4558777-4558787:+
Species Sorghum   Bicolor
Coordinates 9:4558777..4558787
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTTTGCTCAAG
Microexon Amino Acid seq GLLK
Microexon-tag DNA Seq AAGGGTTGGCCAGCAGATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTGCTCAAGGTCAAGGAGGTATTCAGCTTCTGTCAGGATGACCTGGCAACTGAAGCG
Microexon-tag Amino Acid Seq KGWPADPHLYACRFEQGLLKVKEVFSFCQDDLATEA
Microexon-tag spanning region4558637-4558934
Microexon-tag prediction score0.868
Overlapped with the annotated transcript (%) 100
New Transcript ID EES17736x
Reference Transcript ID EES17736
Gene ID SORBI_3009G048000
Gene Name NA
Transcript ID EES17736
Protein ID
Gene ID SORBI_3009G048000
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >EES17736
MKGVDDAFLGVGDKPGLDIWCIVGSSLVPVAKPQHGKFYTGSTYIILNTTELKSGARRHNVHYWVGEEAKEDDCLMASDK
AVELDAALGSSTVQYRETQGEESDKFLSYFKPCVIPVQGCFFSHLKGSGDRSNATTMFRCQGEHIARVTQIPFTRSSLDH
KSVFIVDTPSKIFLFSGCNSSLQTRAKALDVVKHLKENRHLGRCEIAAIEDGKLVGDSDAGEFWNLFGGYAPIPRDLPDT
VKEEPLTAPSKKLFWINKRNLVPLEAHLLDREMLNSDRSYMLDCSTEIFLWMGMTTLVSERKSSVTVLEDYMHSQGRSFN
VRTFIMTEGHETVDFKLHFQHWPRNVELKLYEAGREKVAAIFKHQGYDVTEIPEDKPQQLISCNGSLKVWLVDHGCTNLL
STEDQEQLYTGDCYIIRYSYVEDGKDYHLFFAWSGKNSVKDDSMLATSLMSSMADSVKGHPVVAKVFEGREPELFFSVFK
SLIIFKGGRSAAYKSSVLQKNPRNGYHQKEGVALFRVQGLKHDCVQAIQVDLAASSLNSSHCYILEDNGLFLTWLGSLSS
PNDHNILDLMMNKLCPMKQSLLVREGSEPDHFWIALGGRSEYSKEKRVKGWPADPHLYACRFEQGLLKVKEVFSFCQDDL
ATEATLILDCDEEIYVWVGLHSDITSKEQALNIGKMFLQDGIFHSGRSIETTVYTVTEGDEPVFFTNFFNNWDNSKQSSM
VGNSFERKLAVLKGVSPKLETPDRSMRRPPSRRPGVSSEPTTPEHQHQQPTARRAFGSASAGRFGRERSPAAAPPMSSPS
PKSRSTSSTPTAVARRLFPASVHASEAVHVVSTGTTARRR*
CDS seq >EES17736
ATGAAGGGCGTCGACGATGCGTTCCTCGGCGTCGGCGACAAGCCAGGGCTGGACATTTGGTGCATTGTTGGGAGCAGTCT
GGTCCCGGTTGCAAAACCCCAGCACGGCAAGTTCTACACCGGCAGCACCTACATCATACTGAATACAACCGAGCTGAAAT
CCGGGGCTCGTCGACACAATGTGCATTACTGGGTTGGGGAGGAGGCCAAAGAGGACGATTGCCTCATGGCCTCAGACAAG
GCTGTTGAGTTGGACGCGGCACTGGGCTCCAGCACGGTCCAGTACAGGGAAACACAGGGTGAAGAATCTGACAAGTTCTT
GTCATACTTCAAACCGTGTGTCATCCCAGTACAAGGCTGCTTCTTTTCACACCTGAAAGGATCTGGTGATAGATCCAACG
CGACCACGATGTTTAGATGCCAAGGAGAGCACATTGCTCGCGTCACACAAATTCCATTTACGCGGTCCTCTCTGGATCAC
AAATCGGTTTTTATAGTGGACACGCCGTCGAAGATCTTCCTTTTCAGTGGCTGTAATTCTAGTTTGCAAACAAGGGCGAA
AGCGTTGGATGTTGTTAAGCATCTGAAGGAGAACCGACACTTGGGCAGATGTGAGATCGCGGCAATAGAGGATGGAAAGC
TTGTTGGTGATTCTGATGCTGGTGAGTTCTGGAACCTGTTTGGAGGCTATGCACCTATTCCTCGTGATTTACCTGACACA
GTCAAGGAAGAGCCACTGACTGCACCATCCAAGAAACTTTTTTGGATCAATAAGAGAAACCTTGTTCCATTGGAGGCACA
TTTGTTGGATAGAGAAATGCTGAACTCAGACAGAAGTTACATGCTGGACTGTAGCACTGAAATATTCTTATGGATGGGGA
TGACAACACTAGTTTCGGAGAGGAAGTCATCTGTTACTGTCTTAGAAGATTATATGCACTCCCAGGGCAGGTCATTCAAT
GTTCGCACATTTATAATGACAGAAGGTCATGAAACTGTTGACTTTAAGCTGCACTTTCAGCATTGGCCCAGGAATGTTGA
ACTAAAGTTATATGAGGCTGGCCGAGAGAAAGTGGCAGCTATTTTCAAGCATCAGGGTTATGATGTCACAGAAATTCCAG
AGGATAAACCTCAGCAGCTCATCAGTTGTAATGGCAGTCTGAAGGTGTGGTTGGTGGACCATGGCTGTACAAACCTCCTT
AGCACTGAGGACCAGGAGCAGTTGTACACTGGAGACTGTTATATCATACGGTACAGCTATGTTGAAGATGGAAAAGATTA
CCATCTTTTCTTTGCTTGGTCTGGTAAGAATAGTGTAAAGGACGATAGCATGTTGGCAACATCGTTAATGTCTAGCATGG
CTGATTCAGTCAAAGGGCATCCAGTTGTGGCAAAAGTTTTCGAGGGCAGAGAACCAGAATTGTTTTTCTCGGTGTTCAAG
TCACTAATCATATTCAAGGGGGGCAGGAGTGCTGCATATAAGAGTTCTGTTCTACAGAAAAATCCTAGAAATGGATATCA
TCAGAAGGAAGGAGTCGCCCTGTTCCGTGTTCAAGGCCTTAAACATGATTGTGTGCAAGCCATTCAAGTTGATCTGGCTG
CAAGTTCACTTAATTCCTCGCACTGTTATATTTTGGAAGACAATGGTTTGTTCCTTACCTGGTTAGGAAGCCTCTCTTCA
CCAAACGATCATAATATTCTTGACTTGATGATGAACAAGTTGTGTCCAATGAAACAGTCCTTGCTAGTCAGAGAAGGCTC
TGAGCCGGATCACTTCTGGATAGCTTTGGGAGGACGATCAGAGTACTCGAAAGAAAAGCGCGTGAAGGGTTGGCCAGCAG
ATCCACATCTGTATGCTTGTAGATTTGAACAAGGTTTGCTCAAGGTCAAGGAGGTATTCAGCTTCTGTCAGGATGACCTG
GCAACTGAAGCGACATTGATTCTGGACTGCGATGAAGAAATCTACGTTTGGGTTGGGCTACACTCAGACATTACATCCAA
GGAGCAAGCCCTGAATATTGGCAAGATGTTCCTTCAGGATGGCATTTTTCACAGTGGAAGATCGATTGAAACGACGGTGT
ATACAGTCACAGAAGGGGACGAGCCTGTATTTTTCACCAATTTCTTCAACAACTGGGACAATTCCAAGCAATCATCTATG
GTTGGCAACTCATTTGAGAGGAAGCTGGCCGTCCTGAAAGGAGTCTCTCCAAAACTAGAGACACCGGACAGAAGCATGCG
CAGGCCGCCATCGAGGAGGCCCGGGGTATCGTCGGAGCCGACCACGCCGGAGCACCAACACCAGCAGCCGACGGCGAGGA
GGGCCTTTGGCTCCGCGTCTGCCGGGAGGTTTGGCAGGGAGCGCTCACCAGCTGCCGCACCGCCAATGTCATCGCCATCT
CCCAAAAGCCGCTCGACGTCGTCCACGCCCACCGCGGTGGCACGGCGGCTCTTCCCTGCCTCGGTGCACGCATCGGAGGC
CGTGCACGTCGTCTCCACGGGGACGACAGCTCGACGACGGTGA
Sb_9:4558777-4558787:+ does not have available information here.