
Microexon ID | Sb_2:69691737-69691747:+ |
Species | Sorghum Bicolor | Coordinates | 2:69691737..69691747 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | CGAGAACTTGAAAGTGATCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAAGAAATATACCACTTTACTCAAGATGATCTAATGACAGAAGAT |
Microexon-tag Amino Acid Seq | RELESDPHLFSCILSKGNLKVKEIYHFTQDDLMTED |
Microexon-tag spanning region | 69691563-69691885 |
Microexon-tag prediction score | 0.9569 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG36397x |
Reference Transcript ID | KXG36397 |
Gene ID | SORBI_3002G327000 |
Gene Name | NA |
Transcript ID | KXG36397 |
Protein ID | |
Gene ID | SORBI_3002G327000 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KXG36397 MSVSMKDLDPAFRGSGQKDGLEIWRIENFKPVPVPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDEAGT AAILTVELDAALGGRAVQYREIQGNETEKFLSYFRPCIMPQPGGVASGFNHVEVNEQDHETRLYVCHGKHVVHVKEVPFA RSSLNHDDIFILDTKFKIFQFSGSNSSIQERAKALEVVQYIKDTFHEGKCEIASVEDGRMMADAEAGEFWSFFGGFAPLP RRAPAEGNEKHEETAFKLLCFDQGKLVPIDCQSLAHELLETNKCYFLDSGSELYVWMGRITSLQERKGASEAAEKLLSDS NRTRTHIIKVIEGFETVTFKSKFKEWPQTPELKLSSEDGRGKVAALLKRQGLNVKGLMKAAPAKEEPQSYIDCTGNLQVW RVNDKDKVQLSSSDQSKFYTGDCYVFQYTYPGDDKEECLVGTWFGKKSIEEDRVIAVSLASKMVESAKFQAVQARFYEGK EPIQFFVIFQSLQVFKGGLSSGYKRFTAENGIDDESYSEDGLALFRIQGSGPENMQAIQVEPVASSLNSSYCYILHDGHT VFTWAGNLTTALDQELMERQLDVIKPNTQSRSQKEGSETDQFWSLLGGKSEYSGQKMVRELESDPHLFSCILSKGNLKVK EIYHFTQDDLMTEDVFILDCHTSIFVWVGQQVDVKVRLQALDVGEKFIVLDFLMENLARETPIFTVMEGSEPPFFTRFFT WDLAKSLMHGNSYQRKLAIVKGGGAPALDKPKRRTPVYSGRSTTQDKSQRSRSMSFSPERVRVRGRSPAFTALAANFESS SNRNLSTPPPVVKKLYPKSVTPDSSNTKSSAIAAVAGSLDRPSQTPAPEFVKDGSESEKPKQEGDGKGVDTVATRVESLT INEDVKENEPEDDEGLPIYPYERLQTTAADPVTEIDVTRRETYLSSTEFKEKFGMTKEAFSKLPKWKQNRLKIALQLF* |
CDS seq | >KXG36397 ATGTCAGTTTCTATGAAGGACCTGGACCCGGCTTTCCGTGGTTCTGGACAAAAGGACGGCTTGGAAATATGGCGTATTGA GAATTTCAAGCCGGTTCCTGTCCCTGCATCTTCATATGGAAAGTTCTTCATGGGTGATTCTTACATTATCTTGAAGACAA CAGCCTTGAAAAATGGTTCTCTTCGCCATGACATCCATTACTGGATTGGTAAAGATACTAGTCAGGACGAAGCTGGAACT GCTGCGATTTTAACGGTAGAGCTTGATGCTGCTCTTGGCGGGCGTGCTGTTCAGTACCGAGAAATACAAGGCAATGAAAC AGAAAAATTCCTGTCCTATTTTAGACCATGCATCATGCCACAGCCAGGAGGAGTGGCATCTGGATTCAACCATGTTGAGG TCAATGAGCAGGATCACGAGACCCGCTTATATGTCTGCCATGGGAAGCATGTTGTTCATGTTAAAGAGGTTCCCTTTGCT CGATCATCCCTTAATCATGATGACATATTTATTTTGGATACGAAGTTCAAAATTTTCCAGTTCAGTGGCTCAAACTCATC CATCCAAGAGCGAGCAAAAGCTCTTGAAGTTGTGCAGTACATCAAAGATACATTTCATGAGGGCAAATGTGAAATTGCAT CTGTTGAGGATGGTAGAATGATGGCTGATGCGGAAGCTGGTGAATTCTGGAGTTTTTTTGGTGGCTTCGCCCCTCTTCCT AGGAGGGCACCTGCAGAAGGCAATGAGAAACATGAAGAAACTGCTTTCAAATTGCTATGTTTTGACCAAGGAAAGCTGGT GCCTATCGACTGCCAATCTTTAGCACATGAATTACTTGAGACAAACAAGTGTTACTTCTTAGACTCTGGTTCTGAATTGT ATGTTTGGATGGGCAGAATTACATCCCTGCAGGAGAGAAAGGGTGCTAGTGAAGCTGCTGAGAAATTGCTCTCTGATTCA AACCGAACAAGAACACATATAATCAAAGTGATTGAAGGGTTTGAGACTGTTACGTTCAAGTCAAAATTTAAAGAGTGGCC GCAGACGCCTGAGTTGAAGTTGTCATCGGAGGATGGAAGAGGCAAAGTTGCAGCTCTTCTCAAACGCCAGGGCTTAAATG TTAAGGGTTTGATGAAAGCTGCTCCTGCAAAAGAAGAACCTCAATCCTATATTGATTGCACTGGCAACTTGCAGGTTTGG CGTGTAAATGATAAAGACAAGGTTCAACTCTCATCCTCTGACCAATCCAAATTTTACACTGGCGATTGCTACGTATTTCA GTATACTTATCCTGGAGATGATAAGGAGGAATGTCTTGTTGGAACCTGGTTTGGGAAAAAGAGTATTGAGGAGGATAGGG TAATAGCAGTTTCACTTGCAAGCAAGATGGTTGAATCTGCTAAGTTTCAGGCCGTCCAGGCACGCTTTTATGAGGGGAAA GAACCGATTCAGTTCTTTGTGATATTTCAAAGCTTGCAAGTGTTTAAGGGTGGTCTTAGTTCTGGATACAAGAGATTCAC CGCTGAAAATGGTATTGATGATGAAAGTTATTCTGAAGATGGGCTTGCACTCTTTCGTATTCAAGGTTCAGGACCAGAAA ACATGCAAGCGATTCAAGTTGAACCAGTGGCCTCGTCATTGAATTCATCATATTGTTACATTCTACATGATGGACACACA GTGTTCACTTGGGCTGGAAATCTGACCACTGCATTGGATCAAGAGTTAATGGAGAGGCAACTTGATGTTATTAAGCCAAA CACACAGTCTAGGTCACAAAAGGAAGGTTCAGAAACGGACCAGTTTTGGAGCTTACTGGGAGGCAAATCTGAGTACTCAG GCCAAAAAATGGTGCGAGAACTTGAAAGTGATCCCCATCTTTTCTCATGCATCCTGTCGAAAGGCAATTTGAAGGTCAAA GAAATATACCACTTTACTCAAGATGATCTAATGACAGAAGATGTTTTCATTCTGGACTGTCACACGAGCATATTTGTTTG GGTTGGTCAGCAGGTGGATGTTAAAGTCAGGTTACAAGCTCTGGATGTTGGGGAGAAATTTATTGTGCTTGATTTCCTTA TGGAAAACCTTGCCCGTGAAACACCAATTTTCACCGTTATGGAGGGGAGTGAGCCTCCCTTTTTCACTAGATTCTTCACC TGGGACTTGGCAAAATCACTGATGCATGGCAATTCATACCAGAGGAAGCTTGCCATTGTAAAAGGTGGAGGTGCTCCAGC ACTGGATAAACCGAAACGACGAACACCCGTCTATTCAGGAAGGAGTACTACACAAGATAAATCCCAACGCTCCAGAAGCA TGTCCTTCAGTCCTGAGCGCGTCCGTGTTAGGGGAAGATCTCCAGCATTCACTGCATTGGCTGCTAATTTTGAAAGTTCA AGCAACAGAAATCTTTCCACTCCTCCACCTGTAGTTAAGAAACTTTACCCGAAATCTGTTACACCTGATTCGTCAAATAC AAAGTCATCTGCAATTGCTGCTGTGGCTGGTTCTTTGGATCGCCCTTCTCAAACTCCTGCTCCAGAATTCGTGAAAGATG GCTCTGAGTCAGAGAAGCCAAAACAGGAGGGAGATGGTAAAGGTGTTGATACTGTGGCCACTAGAGTCGAATCTCTGACT ATAAATGAAGATGTAAAAGAAAACGAGCCAGAAGATGACGAGGGCCTTCCTATTTACCCATATGAACGTCTGCAGACCAC AGCTGCTGATCCTGTTACTGAAATTGATGTCACGAGGCGAGAGACCTACTTGTCTTCGACTGAATTCAAAGAGAAGTTTG GGATGACAAAGGAAGCATTTAGCAAGCTTCCAAAGTGGAAGCAGAATAGGCTAAAAATTGCTCTTCAACTTTTTTAG |
Sb_2:69691737-69691747:+ does not have available information here.