
Microexon ID | Sb_10:55934125-55934135:- |
Species | Sorghum Bicolor | Coordinates | 10:55934125..55934135 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGGTGCTTAAG |
Microexon Amino Acid seq | GVLK |
Microexon-tag DNA Seq | AGGGATCAAGAAAGTGACCCTCATTTATTTGCTTGTACATTTATAAAGGGGGTGCTTAAGGTCAGGGAAATATTCAACTTCACTCAAGATGATTTGATGACAGAGGAT |
Microexon-tag Amino Acid Seq | RDQESDPHLFACTFIKGVLKVREIFNFTQDDLMTED |
Microexon-tag spanning region | 55933997-55934323 |
Microexon-tag prediction score | 0.9525 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG20525x |
Reference Transcript ID | KXG20525 |
Gene ID | SORBI_3010G216000 |
Gene Name | NA |
Transcript ID | KXG20525 |
Protein ID | |
Gene ID | SORBI_3010G216000 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KXG20525 MAVSMREVDPVFQGAGQKDGLEIWRIEKLQAVPVPKESYGKFFTGDSYIVLKTTALKNGSFRHDIHYWLGKDTSQDEAGT AAIKTVELDAALGGRAVQYREIQGNETEKFLSYFKPCIIPEEGGVASGFRHAEVNEREHKTRLFVCRGKHTVHVKEVPFA RASLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQHLKDTNHDGKCEVAAVEDGKLMADADAGEFWGLFGGFAPLP RKTFSELNGKDFTSTSKLLCVNKGQSAPIDCEILKRELLDSTKCYLLDCGSEIYVWMGRETTLEERKRGGSAAEELLREG NRPKSHIIRLMEGFETVTFKSKFDKWPKKADAVVSDESRGKVAALLKRQGFNFKGPAKAAPVKQEPQPQIDCTGNLQVWR VNGSDKTFLSFSEQCKFYSGDCYIFQYTYPGDNGDECLIGTWFGKKSVQEERSSAISLADKMIESLKFQAVLVRVYEGKE PIEFFPIFQNLVIYKGGTSTGYKKFVSESGIEDDTYSEKGVALFRVQGSGPENMQAIQVDTAASSLNSSYCYILHDGDTV FTWIGNLSSSMDQELAERQLDVIKIDGNQWAMTSQPSKLKPNLQSRMLKEGSEYDQFWKLLGVKSEYGSQKIVRDQESDP HLFACTFIKGVLKVREIFNFTQDDLMTEDIFILDCHSCVFVWVGQRVDTKIRAQALNIGEKFLELDILMENVSRETPLYV ITEGSEPQYFTRFFSWDSAKSSMHGNSFERRLSIVKDGVKPRADKPKRRPTTSTHTGRSSVPDKSQRSRSMSFSPDRVRV RGRSPAFNALAANFENPNARNLSTPPPVVRKQVPKPVSPDSSKPTPRTASIAAISSTFERPKATLIPKSIKASPDASKPQ IEASKPKLETNAKEINPTKDSQIATSTVEEDVKESQAEGQAGLPIYPYDRLRTSSTNPPTDIDVTKRETYLSLSEFREKF GMTKEAFGKLPKWKQNRLKIALQLF* |
CDS seq | >KXG20525 ATGGCTGTTTCAATGAGGGAAGTGGATCCTGTTTTTCAAGGTGCAGGTCAAAAAGATGGATTGGAAATATGGCGAATTGA AAAGTTACAGGCTGTTCCTGTTCCCAAGGAATCATATGGGAAATTTTTCACAGGAGACTCCTATATAGTACTGAAGACAA CTGCCCTTAAGAATGGTTCTTTTCGGCATGATATCCATTATTGGCTCGGCAAAGATACCAGTCAGGATGAAGCTGGTACA GCTGCAATCAAGACTGTGGAACTCGATGCTGCTCTTGGTGGAAGAGCTGTCCAATACCGTGAAATACAGGGAAATGAGAC AGAGAAATTTCTTTCGTACTTTAAGCCTTGTATTATACCAGAGGAAGGTGGTGTTGCATCTGGCTTCAGGCATGCTGAAG TAAATGAGCGGGAGCATAAAACACGATTATTTGTCTGCAGAGGAAAGCATACTGTTCATGTTAAAGAGGTTCCTTTTGCA CGAGCATCACTCAACCATGATGACATATTTATTTTAGATACAAAATCTAAGATATTCCAATTCAATGGATCAAATTCAAG TATTCAGGAGAGGGCTAAAGCACTTGAGGTTGTGCAACATCTTAAAGATACCAACCATGATGGGAAATGTGAAGTAGCGG CGGTTGAGGATGGAAAGTTGATGGCTGACGCTGATGCTGGTGAATTCTGGGGTCTCTTTGGCGGATTTGCTCCTTTACCA AGAAAGACGTTTTCTGAACTCAACGGGAAAGATTTTACTTCCACTTCAAAATTGCTTTGTGTCAATAAGGGCCAATCAGC TCCTATTGATTGCGAAATTCTAAAAAGAGAGCTATTAGATTCAACAAAATGTTATCTACTAGACTGTGGTTCTGAAATTT ATGTCTGGATGGGTAGAGAAACAACTCTTGAAGAAAGGAAACGAGGAGGCTCGGCTGCTGAGGAATTACTACGTGAAGGA AACCGGCCAAAATCTCATATTATTCGGCTCATGGAAGGATTTGAGACTGTTACATTCAAATCAAAGTTTGATAAATGGCC CAAGAAAGCTGATGCAGTTGTGTCGGATGAAAGCAGAGGAAAAGTGGCAGCTCTTCTTAAGCGACAAGGATTTAATTTTA AGGGTCCAGCAAAAGCTGCTCCTGTAAAGCAAGAGCCTCAACCTCAGATTGATTGCACTGGCAATTTACAGGTTTGGCGC GTGAATGGCAGTGATAAGACTTTCCTTTCATTCTCTGAGCAATGCAAGTTTTACAGTGGAGACTGCTATATCTTTCAATA CACCTACCCTGGAGACAATGGAGATGAATGCCTTATTGGTACCTGGTTTGGGAAGAAGAGTGTCCAGGAGGAAAGAAGTT CAGCCATTTCACTAGCTGACAAGATGATTGAGTCTTTAAAATTCCAAGCTGTTCTGGTTCGCGTCTATGAAGGAAAGGAA CCCATTGAATTTTTCCCAATATTTCAAAACTTGGTTATATACAAGGGAGGTACAAGTACTGGGTATAAGAAATTTGTCTC AGAAAGTGGCATTGAAGATGATACCTATTCAGAAAAAGGGGTTGCACTTTTTCGAGTTCAGGGCTCAGGGCCAGAGAATA TGCAAGCTATTCAAGTTGACACGGCAGCATCATCGCTGAACTCTTCTTATTGTTACATACTGCATGATGGAGATACAGTA TTTACATGGATCGGTAATCTAAGCTCATCAATGGACCAAGAGCTTGCTGAGAGGCAGCTAGATGTGATCAAGATTGATGG CAACCAGTGGGCAATGACTAGTCAGCCATCTAAGCTAAAGCCAAATTTGCAGTCCAGAATGCTCAAAGAAGGATCTGAAT ATGATCAGTTTTGGAAGTTACTTGGAGTCAAGTCTGAGTATGGCAGCCAGAAGATTGTGAGGGATCAAGAAAGTGACCCT CATTTATTTGCTTGTACATTTATAAAGGGGGTGCTTAAGGTCAGGGAAATATTCAACTTCACTCAAGATGATTTGATGAC AGAGGATATATTTATTTTGGATTGTCACTCATGTGTCTTCGTATGGGTTGGACAACGTGTGGACACAAAAATACGAGCAC AAGCTTTGAACATTGGAGAGAAATTTCTAGAACTTGACATTCTAATGGAGAATGTATCACGAGAAACACCACTTTATGTC ATCACTGAAGGAAGTGAACCTCAATATTTCACCAGGTTCTTCAGTTGGGATTCAGCAAAATCATCAATGCATGGTAACTC ATTTGAAAGGAGGCTATCTATAGTGAAGGATGGAGTAAAACCAAGAGCAGATAAACCAAAAAGAAGGCCAACAACATCAA CACACACCGGAAGGTCTAGTGTACCTGATAAATCCCAACGTTCCCGAAGTATGTCCTTCAGTCCTGATCGTGTAAGAGTC AGAGGAAGGTCGCCTGCTTTCAATGCGTTGGCTGCTAACTTCGAGAACCCAAATGCTCGAAACCTATCAACTCCTCCACC AGTTGTTAGGAAACAAGTTCCGAAGCCTGTATCTCCTGATTCTTCAAAGCCAACTCCAAGGACAGCTTCAATTGCTGCAA TTTCTTCTACTTTTGAGCGGCCTAAAGCAACTCTAATACCAAAGTCAATAAAAGCGAGCCCTGATGCAAGCAAGCCCCAA ATTGAAGCGAGCAAACCTAAACTAGAGACAAATGCCAAGGAAATTAACCCTACAAAAGATAGTCAAATTGCAACTTCTAC AGTAGAGGAAGATGTAAAAGAGAGTCAGGCAGAGGGTCAAGCAGGGCTTCCTATATACCCATATGACCGCTTGAGGACAT CTTCCACCAATCCCCCCACAGACATCGATGTTACCAAGCGAGAGACATATCTGTCTTTGTCGGAGTTCAGAGAGAAGTTT GGGATGACAAAGGAGGCATTTGGGAAGCTACCAAAGTGGAAGCAGAACAGGCTCAAGATTGCCCTCCAGCTATTCTGA |
Sb_10:55934125-55934135:- does not have available information here.