Microexon ID Sb_10:55934125-55934135:-
Species Sorghum   Bicolor
Coordinates 10:55934125..55934135
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGGTGCTTAAG
Microexon Amino Acid seq GVLK
Microexon-tag DNA Seq AGGGATCAAGAAAGTGACCCTCATTTATTTGCTTGTACATTTATAAAGGGGGTGCTTAAGGTCAGGGAAATATTCAACTTCACTCAAGATGATTTGATGACAGAGGAT
Microexon-tag Amino Acid Seq RDQESDPHLFACTFIKGVLKVREIFNFTQDDLMTED
Microexon-tag spanning region55933997-55934323
Microexon-tag prediction score0.9525
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG20525x
Reference Transcript ID KXG20525
Gene ID SORBI_3010G216000
Gene Name NA
Transcript ID KXG20525
Protein ID
Gene ID SORBI_3010G216000
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >KXG20525
MAVSMREVDPVFQGAGQKDGLEIWRIEKLQAVPVPKESYGKFFTGDSYIVLKTTALKNGSFRHDIHYWLGKDTSQDEAGT
AAIKTVELDAALGGRAVQYREIQGNETEKFLSYFKPCIIPEEGGVASGFRHAEVNEREHKTRLFVCRGKHTVHVKEVPFA
RASLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQHLKDTNHDGKCEVAAVEDGKLMADADAGEFWGLFGGFAPLP
RKTFSELNGKDFTSTSKLLCVNKGQSAPIDCEILKRELLDSTKCYLLDCGSEIYVWMGRETTLEERKRGGSAAEELLREG
NRPKSHIIRLMEGFETVTFKSKFDKWPKKADAVVSDESRGKVAALLKRQGFNFKGPAKAAPVKQEPQPQIDCTGNLQVWR
VNGSDKTFLSFSEQCKFYSGDCYIFQYTYPGDNGDECLIGTWFGKKSVQEERSSAISLADKMIESLKFQAVLVRVYEGKE
PIEFFPIFQNLVIYKGGTSTGYKKFVSESGIEDDTYSEKGVALFRVQGSGPENMQAIQVDTAASSLNSSYCYILHDGDTV
FTWIGNLSSSMDQELAERQLDVIKIDGNQWAMTSQPSKLKPNLQSRMLKEGSEYDQFWKLLGVKSEYGSQKIVRDQESDP
HLFACTFIKGVLKVREIFNFTQDDLMTEDIFILDCHSCVFVWVGQRVDTKIRAQALNIGEKFLELDILMENVSRETPLYV
ITEGSEPQYFTRFFSWDSAKSSMHGNSFERRLSIVKDGVKPRADKPKRRPTTSTHTGRSSVPDKSQRSRSMSFSPDRVRV
RGRSPAFNALAANFENPNARNLSTPPPVVRKQVPKPVSPDSSKPTPRTASIAAISSTFERPKATLIPKSIKASPDASKPQ
IEASKPKLETNAKEINPTKDSQIATSTVEEDVKESQAEGQAGLPIYPYDRLRTSSTNPPTDIDVTKRETYLSLSEFREKF
GMTKEAFGKLPKWKQNRLKIALQLF*
CDS seq >KXG20525
ATGGCTGTTTCAATGAGGGAAGTGGATCCTGTTTTTCAAGGTGCAGGTCAAAAAGATGGATTGGAAATATGGCGAATTGA
AAAGTTACAGGCTGTTCCTGTTCCCAAGGAATCATATGGGAAATTTTTCACAGGAGACTCCTATATAGTACTGAAGACAA
CTGCCCTTAAGAATGGTTCTTTTCGGCATGATATCCATTATTGGCTCGGCAAAGATACCAGTCAGGATGAAGCTGGTACA
GCTGCAATCAAGACTGTGGAACTCGATGCTGCTCTTGGTGGAAGAGCTGTCCAATACCGTGAAATACAGGGAAATGAGAC
AGAGAAATTTCTTTCGTACTTTAAGCCTTGTATTATACCAGAGGAAGGTGGTGTTGCATCTGGCTTCAGGCATGCTGAAG
TAAATGAGCGGGAGCATAAAACACGATTATTTGTCTGCAGAGGAAAGCATACTGTTCATGTTAAAGAGGTTCCTTTTGCA
CGAGCATCACTCAACCATGATGACATATTTATTTTAGATACAAAATCTAAGATATTCCAATTCAATGGATCAAATTCAAG
TATTCAGGAGAGGGCTAAAGCACTTGAGGTTGTGCAACATCTTAAAGATACCAACCATGATGGGAAATGTGAAGTAGCGG
CGGTTGAGGATGGAAAGTTGATGGCTGACGCTGATGCTGGTGAATTCTGGGGTCTCTTTGGCGGATTTGCTCCTTTACCA
AGAAAGACGTTTTCTGAACTCAACGGGAAAGATTTTACTTCCACTTCAAAATTGCTTTGTGTCAATAAGGGCCAATCAGC
TCCTATTGATTGCGAAATTCTAAAAAGAGAGCTATTAGATTCAACAAAATGTTATCTACTAGACTGTGGTTCTGAAATTT
ATGTCTGGATGGGTAGAGAAACAACTCTTGAAGAAAGGAAACGAGGAGGCTCGGCTGCTGAGGAATTACTACGTGAAGGA
AACCGGCCAAAATCTCATATTATTCGGCTCATGGAAGGATTTGAGACTGTTACATTCAAATCAAAGTTTGATAAATGGCC
CAAGAAAGCTGATGCAGTTGTGTCGGATGAAAGCAGAGGAAAAGTGGCAGCTCTTCTTAAGCGACAAGGATTTAATTTTA
AGGGTCCAGCAAAAGCTGCTCCTGTAAAGCAAGAGCCTCAACCTCAGATTGATTGCACTGGCAATTTACAGGTTTGGCGC
GTGAATGGCAGTGATAAGACTTTCCTTTCATTCTCTGAGCAATGCAAGTTTTACAGTGGAGACTGCTATATCTTTCAATA
CACCTACCCTGGAGACAATGGAGATGAATGCCTTATTGGTACCTGGTTTGGGAAGAAGAGTGTCCAGGAGGAAAGAAGTT
CAGCCATTTCACTAGCTGACAAGATGATTGAGTCTTTAAAATTCCAAGCTGTTCTGGTTCGCGTCTATGAAGGAAAGGAA
CCCATTGAATTTTTCCCAATATTTCAAAACTTGGTTATATACAAGGGAGGTACAAGTACTGGGTATAAGAAATTTGTCTC
AGAAAGTGGCATTGAAGATGATACCTATTCAGAAAAAGGGGTTGCACTTTTTCGAGTTCAGGGCTCAGGGCCAGAGAATA
TGCAAGCTATTCAAGTTGACACGGCAGCATCATCGCTGAACTCTTCTTATTGTTACATACTGCATGATGGAGATACAGTA
TTTACATGGATCGGTAATCTAAGCTCATCAATGGACCAAGAGCTTGCTGAGAGGCAGCTAGATGTGATCAAGATTGATGG
CAACCAGTGGGCAATGACTAGTCAGCCATCTAAGCTAAAGCCAAATTTGCAGTCCAGAATGCTCAAAGAAGGATCTGAAT
ATGATCAGTTTTGGAAGTTACTTGGAGTCAAGTCTGAGTATGGCAGCCAGAAGATTGTGAGGGATCAAGAAAGTGACCCT
CATTTATTTGCTTGTACATTTATAAAGGGGGTGCTTAAGGTCAGGGAAATATTCAACTTCACTCAAGATGATTTGATGAC
AGAGGATATATTTATTTTGGATTGTCACTCATGTGTCTTCGTATGGGTTGGACAACGTGTGGACACAAAAATACGAGCAC
AAGCTTTGAACATTGGAGAGAAATTTCTAGAACTTGACATTCTAATGGAGAATGTATCACGAGAAACACCACTTTATGTC
ATCACTGAAGGAAGTGAACCTCAATATTTCACCAGGTTCTTCAGTTGGGATTCAGCAAAATCATCAATGCATGGTAACTC
ATTTGAAAGGAGGCTATCTATAGTGAAGGATGGAGTAAAACCAAGAGCAGATAAACCAAAAAGAAGGCCAACAACATCAA
CACACACCGGAAGGTCTAGTGTACCTGATAAATCCCAACGTTCCCGAAGTATGTCCTTCAGTCCTGATCGTGTAAGAGTC
AGAGGAAGGTCGCCTGCTTTCAATGCGTTGGCTGCTAACTTCGAGAACCCAAATGCTCGAAACCTATCAACTCCTCCACC
AGTTGTTAGGAAACAAGTTCCGAAGCCTGTATCTCCTGATTCTTCAAAGCCAACTCCAAGGACAGCTTCAATTGCTGCAA
TTTCTTCTACTTTTGAGCGGCCTAAAGCAACTCTAATACCAAAGTCAATAAAAGCGAGCCCTGATGCAAGCAAGCCCCAA
ATTGAAGCGAGCAAACCTAAACTAGAGACAAATGCCAAGGAAATTAACCCTACAAAAGATAGTCAAATTGCAACTTCTAC
AGTAGAGGAAGATGTAAAAGAGAGTCAGGCAGAGGGTCAAGCAGGGCTTCCTATATACCCATATGACCGCTTGAGGACAT
CTTCCACCAATCCCCCCACAGACATCGATGTTACCAAGCGAGAGACATATCTGTCTTTGTCGGAGTTCAGAGAGAAGTTT
GGGATGACAAAGGAGGCATTTGGGAAGCTACCAAAGTGGAAGCAGAACAGGCTCAAGATTGCCCTCCAGCTATTCTGA
Sb_10:55934125-55934135:- does not have available information here.