
Microexon ID | Sb_1:65538831-65538841:- |
Species | Sorghum Bicolor | Coordinates | 1:65538831..65538841 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAGCTGGAG |
Microexon Amino Acid seq | GKLE |
Microexon-tag DNA Seq | GATGCTGTTATTAGAGAGCCTCATTTGTATACCTTCTCTCTTAGGAATGGGAAGCTGGAGGTTACTGAAGTTTTCAATTTTTCACAAGATGATTTGTTGACTGAAGAT |
Microexon-tag Amino Acid Seq | DAVIREPHLYTFSLRNGKLEVTEVFNFSQDDLLTED |
Microexon-tag spanning region | 65538695-65539016 |
Microexon-tag prediction score | 0.9547 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER94835x |
Reference Transcript ID | EER94835 |
Gene ID | SORBI_3001G366700 |
Gene Name | NA |
Transcript ID | EER94835 |
Protein ID | |
Gene ID | SORBI_3001G366700 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >EER94835 MSNAKVVLEPAFQGAGHKPGTEIWRIEDFKPVALPKSDYGKFYCGDSYIVLQTTCKGGAYIFDIHFWIGKDSSQDEAGTA AIKTVELDSMLGGRAVQHREPQCYESDKFLSYFKPCIIPMEGGFASGFKKPEVDKFEVRLYICKGKRAIRVKEVPFARSS LNHDDVFILDTENKIYQFNGANSNIQERAKALEVIQHLKEKYHDGVCAVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT ISDDDVVLETTAPKLFSITNGQLKLEDTALTKSVLENTKCFLLDCGAELFVWVGRVTQVEERKAASAAVEKFIIKENRPK TARITQVIQGYENHTFKSKFESWPVSTTAGSASTEEGRVKVTAMLKQKGVDVKGITKTSAPVNDEVPPLLDGGGKLEVWC VNGSVKTALPKEELGKFYSGDCYVVLYTYHSADKKEEFYLTYWIGKNSVQEDQEAVFQIANTTWNSLKGRPVLGRIYQGK EPPQFVALFQPMVILKGGTSSGYKKFVEEKGLKDETYCADGVALIRISGTAVHNNKTLQVDAVPTSLSSTDCFVLQTKNS MFLWNGNSSSFEQQQWAAKVAEFLKTGVAVKHCKEGTESSIFWSSIGGKQSYTSKSAAPDAVIREPHLYTFSLRNGKLEV TEVFNFSQDDLLTEDTMILDTHGEVFVWMGQCVETKEKQKAFDIGQKYVQHAVAFEGISPDVPLYKVNEGNEPCFFRTYF SWDNTRSVIHGNSFEKKLSVLFGMRSEGGNKGASGDGGPTQRASALAALSSALNTSSQGKQSDERPTSSSGDSEHTQRAS AMAALSSSLNTSSKPQGSQRAAAVAALSNVLTAEGSHSPRHSRRSSPTADAEKTELAPASPHQLETGSEEVRTEPDVSQE QTANENGGQTTFSYERLISKSTDPVSGIDYKRRETYLVDSEFETVFGMTREEFYGQPRWKQELQKKKADLF* |
CDS seq | >EER94835 ATGTCGAATGCAAAAGTGGTGCTCGAGCCCGCATTTCAAGGAGCTGGCCATAAACCAGGAACAGAAATATGGAGGATCGA GGATTTCAAGCCAGTCGCTTTGCCAAAATCAGATTATGGCAAATTCTACTGTGGAGATTCGTATATAGTTCTGCAGACCA CCTGTAAAGGAGGTGCTTATATCTTTGACATCCATTTCTGGATCGGGAAAGATTCTAGCCAGGATGAAGCTGGAACTGCC GCGATTAAGACGGTTGAACTTGACAGCATGCTTGGGGGTCGTGCGGTACAGCACAGGGAACCACAGTGCTACGAGTCTGA TAAATTCCTTTCCTATTTTAAACCCTGCATCATACCCATGGAGGGTGGTTTTGCTTCTGGGTTTAAAAAGCCAGAGGTGG ACAAGTTTGAAGTACGGCTATATATTTGCAAAGGGAAGAGAGCTATCAGAGTTAAAGAGGTTCCCTTTGCTCGTTCATCA TTGAACCATGATGATGTCTTTATCTTGGATACTGAAAATAAAATATACCAATTCAACGGCGCAAACTCCAACATTCAAGA AAGAGCCAAGGCGTTGGAAGTGATCCAACATTTAAAGGAGAAATACCATGATGGAGTGTGTGCTGTTGCAATTGTTGATG ATGGGAAACTGCAAGCAGAATCAGATTCGGGAGAATTCTGGGTCCTTTTTGGAGGTTTTGCGCCAATAGGGAAAAAAACA ATAAGTGATGATGACGTTGTTCTTGAAACTACAGCACCAAAGCTTTTCAGTATCACTAACGGTCAACTGAAGTTAGAAGA CACTGCACTTACAAAATCAGTTCTGGAGAACACCAAATGCTTTTTACTTGACTGTGGGGCTGAGCTATTTGTGTGGGTTG GTCGGGTAACACAGGTAGAGGAGAGGAAAGCTGCCAGTGCGGCAGTTGAGAAATTCATTATTAAAGAAAATAGACCAAAG ACAGCAAGAATAACTCAAGTTATTCAAGGTTATGAGAATCATACATTTAAGTCTAAGTTTGAGTCATGGCCAGTAAGTAC CACAGCAGGGAGTGCCAGCACAGAGGAAGGCCGAGTGAAAGTTACAGCAATGTTGAAGCAGAAAGGTGTCGATGTCAAAG GAATCACAAAAACTAGTGCACCAGTAAATGACGAAGTTCCTCCTTTGCTAGATGGCGGTGGAAAGCTTGAGGTTTGGTGT GTTAATGGCAGTGTGAAGACTGCTCTTCCAAAGGAAGAACTTGGAAAATTCTACAGTGGAGACTGTTATGTTGTTCTCTA CACTTATCATTCTGCTGACAAAAAAGAAGAGTTCTATCTAACTTATTGGATTGGGAAAAATAGTGTACAGGAAGATCAAG AGGCGGTTTTTCAAATAGCTAATACAACTTGGAATTCTTTGAAAGGAAGACCTGTCCTGGGTCGTATTTATCAAGGAAAA GAGCCACCACAATTTGTTGCTCTTTTCCAACCAATGGTTATTCTTAAGGGTGGTACTAGTTCTGGTTATAAGAAATTTGT AGAAGAGAAGGGTCTGAAAGATGAAACATATTGTGCTGATGGCGTTGCTCTCATTCGAATTTCTGGAACAGCAGTTCATA ACAATAAAACACTTCAAGTTGATGCGGTCCCAACATCCTTGAGTTCCACGGATTGTTTTGTTTTGCAAACTAAAAACTCG ATGTTTTTATGGAATGGAAATTCAAGTTCTTTTGAACAACAACAGTGGGCTGCTAAAGTTGCTGAATTTCTGAAGACCGG TGTTGCTGTCAAACATTGCAAGGAGGGCACTGAGAGCTCTATTTTCTGGTCTTCTATTGGTGGAAAGCAGAGTTATACAA GTAAAAGTGCTGCACCTGATGCTGTTATTAGAGAGCCTCATTTGTATACCTTCTCTCTTAGGAATGGGAAGCTGGAGGTT ACTGAAGTTTTCAATTTTTCACAAGATGATTTGTTGACTGAAGATACGATGATACTTGATACACACGGTGAGGTTTTTGT TTGGATGGGTCAGTGTGTGGAGACAAAAGAAAAACAGAAAGCATTTGACATTGGTCAGAAATACGTACAACATGCTGTGG CCTTTGAAGGTATTTCTCCTGATGTGCCTCTCTATAAAGTCAATGAAGGGAATGAACCTTGCTTCTTCAGGACATACTTC TCCTGGGATAACACACGATCCGTGATTCATGGAAACTCTTTTGAGAAGAAACTTTCAGTTCTTTTTGGAATGCGTTCAGA GGGTGGAAATAAGGGCGCATCAGGTGATGGTGGGCCAACTCAAAGGGCATCAGCCTTGGCAGCTCTTTCATCTGCATTGA ATACATCGTCGCAAGGAAAACAGTCAGACGAGAGGCCCACAAGCTCATCAGGTGACAGCGAGCATACTCAACGTGCTTCA GCAATGGCTGCCTTGTCCTCTTCCCTTAATACATCGTCAAAACCCCAAGGGTCTCAAAGAGCCGCTGCTGTTGCAGCACT GTCCAATGTTTTGACTGCAGAGGGATCTCACAGCCCTCGCCACAGTCGTAGGTCGTCTCCAACAGCAGATGCTGAGAAGA CTGAATTAGCTCCAGCTTCTCCTCATCAGTTAGAAACAGGGTCTGAAGAAGTCAGAACAGAGCCTGATGTCTCACAGGAA CAAACTGCTAACGAAAATGGAGGCCAGACGACCTTTAGCTATGAACGCTTGATATCAAAGTCCACTGACCCTGTTAGTGG GATAGACTACAAGCGCAGAGAGACATATTTGGTGGACAGTGAATTTGAGACCGTGTTTGGTATGACCAGAGAGGAATTCT ACGGTCAGCCAAGATGGAAGCAAGAGTTGCAGAAAAAGAAAGCCGATCTTTTCTGA |
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