| Microexon ID | Pt_18:10959566-10959576:+ |
| Species | Populus Trichocarpa | Coordinates | 18:10959566..10959576 |
| Microexon Cluster ID | MEP27 |
| Size | 11 |
| Phase | 1 |
| Pfam Domain Motif | Gelsolin |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GAAACCTGAAG |
| Microexon Amino Acid seq | GNLK |
| Microexon-tag DNA Seq | AGGGAAGCTGAAAGTGATCCGCACCTATTCTCTTGCATATTTTTGAAAGGAAACCTGAAGGTTTCTGAGATATACAACTTCACCCAGGATGATTTAATGACTGAAGAT |
| Microexon-tag Amino Acid Seq | REAESDPHLFSCIFLKGNLKVSEIYNFTQDDLMTED |
| Microexon-tag spanning region | 10959377-10959863 |
| Microexon-tag prediction score | 0.9541 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.018G089700.4.v4.1x |
| Reference Transcript ID | Potri.018G089700.4.v4.1 |
| Gene ID | Potri.018G089700.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.018G089700.4.v4.1 |
| Protein ID | |
| Gene ID | Potri.018G089700.v4.1 |
| Gene Name | |
| Pfam domain motif | Unknown |
| Motif E-value | NA |
| Motif start | NA |
| Motif end | NA |
| Protein seq | >Potri.018G089700.4.v4.1 MAVSMRDLDSAFQGAGQKAGLEIWRIENFRPVPVPKSSHGKFFTGDSYVILQTTALKSGSLRHDIHYWLGKDTSQDEAGA AAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKQAEAMEHQTHLFVCRGKHVVHVNEVPFARS SLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAVEDGKLMADAETGEFWGFFGGFAPLPRK TTSDEDKTDVSFPTKLFHVEKGQAEPVEADSLTRELLDTNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELVRAAER PNSRIARVIEGFETVMFRSKFESWPQTTNVTVSEDGRGKVAALLRRQGVNVNGLLKTAPVKEEPQPYIDVTGNLQVWSVN DQEKILIPAANQSKFYSGGCYIFQYSYPGEDREEYLIGTWFGKKSVEEERASAISLASKMVESLKFLPAQARIFEGNEPI QFFSIFQSFIVFKGGHSSGYKKYIAENELPDETCKEDGVALFRVQGSGPDNMQAIQVEPVASSLNSSYCYILHNDSSVFT WSGNLTTSEDQELIERQLDLIKPNMQSKPQKEGSESEQFWDLLGGKSEYPSQKLAREAESDPHLFSCIFLKGNLKVSEIY NFTQDDLMTEDIFILDTHSEIFVWVGQQVDSKSKLQALSIGEKFLEHDFLLKKSSGETPIYIVMEGSEPPFFTRFFTWDS AKSSMHGNSFQRKLAIVKNGGTPLLDKPKRRTAVSYGGRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNA RNLSTPPPVVRKVYPKSVSPDSAKLASKSAAIAALTASFEQPPPARQVIMPRSVKVSPETPKSTPESNSKEKPISIRIES LTIQEDVKEGEAEDEEGLPIYPYEGLKVNSPDPVTEIDVTKRETYLSAAEFREKFGMAKDAFYKLPKWKQNKLKMALQLF * |
| CDS seq | >Potri.018G089700.4.v4.1 ATGGCTGTTTCCATGAGAGATTTAGACTCGGCCTTTCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGGATTGA AAACTTTCGTCCTGTTCCTGTGCCGAAGTCCTCTCATGGAAAATTTTTTACCGGGGACTCCTATGTAATTTTACAGACAA CTGCACTAAAAAGTGGTTCCTTACGTCATGATATTCATTATTGGCTAGGTAAAGATACCTCTCAGGATGAAGCAGGTGCT GCTGCCATTAAAACAGTTGAACTAGATGCTGCTCTTGGAGGCCGTGCTGTGCAGTATCGTGAAGTGCAGGGACATGAAAC TGAGAAGTTCTTATCTTATTTTAAACCATGTATTATACCTCAAGAAGGTGGAGTCGCATCTGGATTCAAACAAGCTGAGG CCATGGAACACCAGACACACTTGTTTGTTTGTAGAGGAAAACACGTTGTCCATGTGAACGAGGTTCCTTTTGCTCGATCC TCACTCAACCACGATGATATTTTTATTCTTGATACAAAGTCAAAAATTTTTCAATTTAATGGCTCCAACTCATCCATTCA AGAGAGAGCTAAAGCTTTAGAGGTGGTTCAGTACATCAAAGATACTTATCATGATGGAAAATGTGAGGTGGCTGCTGTTG AGGATGGAAAATTGATGGCTGATGCTGAAACTGGAGAGTTCTGGGGTTTCTTTGGTGGCTTTGCTCCACTTCCAAGGAAA ACAACTAGTGATGAGGATAAGACTGATGTTTCTTTTCCTACTAAGCTGTTTCATGTTGAGAAGGGACAGGCAGAACCTGT TGAAGCTGATTCTTTGACAAGGGAGTTGCTGGACACCAATAAGTGTTACATTCTAGATTGTGGAATTGAAGTCTTTGTAT GGATGGGGAGAAATACTTCTCTTGACGAAAGGAAAAGTGCCAGCGGAGCAGCGGAAGAGTTAGTCCGTGCTGCTGAACGT CCAAATTCCCGCATTGCTCGTGTAATTGAGGGGTTTGAGACGGTGATGTTTAGATCAAAATTTGAATCGTGGCCTCAGAC AACTAACGTGACTGTGTCTGAGGATGGTAGAGGAAAAGTTGCAGCACTTCTAAGACGCCAGGGGGTTAATGTCAATGGTC TGTTGAAAACTGCTCCTGTGAAAGAAGAACCTCAACCATACATTGATGTCACTGGGAATTTGCAGGTTTGGAGTGTGAAT GACCAGGAAAAGATTCTCATTCCTGCTGCAAATCAGTCAAAATTTTACAGTGGAGGTTGCTATATTTTTCAGTATTCATA TCCAGGAGAAGACAGGGAAGAATATCTTATAGGAACATGGTTTGGGAAGAAGAGTGTTGAGGAGGAAAGAGCTTCTGCTA TTTCATTGGCGAGCAAGATGGTTGAATCATTAAAGTTTCTACCTGCCCAGGCTCGCATCTTTGAAGGAAATGAGCCTATC CAGTTCTTTTCAATCTTCCAGAGCTTTATTGTATTTAAGGGTGGTCATAGCTCTGGTTACAAGAAATATATTGCTGAAAA TGAACTCCCAGATGAGACATGCAAGGAGGATGGTGTTGCGTTATTCAGGGTTCAGGGTTCTGGACCTGATAATATGCAGG CTATACAAGTTGAGCCAGTTGCATCATCACTGAATTCCTCCTACTGTTACATATTACATAATGATTCCTCTGTTTTTACG TGGTCTGGAAACCTTACTACTTCAGAGGACCAGGAACTTATTGAAAGGCAGCTGGATTTGATAAAGCCAAATATGCAGTC TAAGCCACAAAAGGAAGGTTCAGAATCTGAACAATTTTGGGATTTGTTAGGAGGTAAATCTGAATATCCCAGTCAAAAAC TTGCAAGGGAAGCTGAAAGTGATCCGCACCTATTCTCTTGCATATTTTTGAAAGGAAACCTGAAGGTTTCTGAGATATAC AACTTCACCCAGGATGATTTAATGACTGAAGATATTTTTATCTTGGATACTCACTCTGAGATCTTTGTCTGGGTGGGGCA ACAGGTTGACTCCAAAAGCAAACTGCAAGCCTTGAGTATTGGAGAGAAATTTCTTGAGCATGATTTTCTGTTAAAGAAGT CATCCGGTGAAACTCCAATATATATTGTTATGGAAGGGAGTGAGCCACCTTTCTTCACACGCTTCTTCACATGGGATTCT GCAAAATCTTCAATGCATGGAAACTCATTCCAAAGGAAACTTGCAATTGTAAAAAATGGGGGTACTCCACTTCTAGATAA ACCCAAACGTAGAACAGCCGTATCTTATGGAGGCAGATCTAGTGTACCTGACAAATCACAGCGTTCCAGAAGCATGTCTT TCAGTCCTGACAGAGTTCGAGTTAGGGGAAGGTCTCCAGCTTTCAATGCCCTGGCTGCTAATTTTGAGAACCCTAATGCC AGAAACCTTTCAACTCCACCACCAGTTGTAAGAAAGGTATATCCAAAGTCTGTGAGCCCTGATTCAGCAAAACTGGCTTC CAAATCTGCAGCTATAGCAGCATTGACTGCAAGTTTTGAACAACCGCCACCAGCACGACAAGTAATTATGCCGCGGTCTG TCAAGGTGAGCCCTGAGACTCCAAAATCGACACCTGAGTCAAACTCTAAGGAGAAGCCTATAAGCATCAGAATAGAATCC CTGACCATACAGGAGGATGTGAAAGAGGGTGAAGCTGAAGATGAGGAAGGGCTCCCAATTTATCCATATGAAGGCCTTAA AGTTAACTCGCCAGATCCTGTAACTGAAATTGATGTGACCAAGCGAGAGACTTACCTCTCAGCAGCAGAATTTAGGGAGA AATTTGGGATGGCAAAGGATGCTTTCTATAAGTTGCCCAAATGGAAACAGAACAAGCTCAAAATGGCCCTTCAATTGTTC TGA |
Pt_18:10959566-10959576:+ does not have available information here.