
Microexon ID | Pp_22:11102770-11102780:+ |
Species | Physcomitrium patens | Coordinates | 22:11102770..11102780 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | AAAGAGAATCCGAAAGATCCTAGGTTGTACGTTTGCAGTTTATCACAAGGAAATTTGAAGGTGACTGAAGTGCACAATTTCACTCAAGATGATCTTCTGAGTGATGAT |
Microexon-tag Amino Acid Seq | KENPKDPRLYVCSLSQGNLKVTEVHNFTQDDLLSDD |
Microexon-tag spanning region | 11102429-11103094 |
Microexon-tag prediction score | 0.8846 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c22_17160V3.1x |
Reference Transcript ID | Pp3c22_17160V3.1 |
Gene ID | Pp3c22_17160 |
Gene Name | NA |
Transcript ID | Pp3c22_17160V3.1 |
Protein ID | Pp3c22_17160V3.1 |
Gene ID | Pp3c22_17160 |
Gene Name | NA |
Pfam domain motif | Gelsolin |
Motif E-value | 4.9e-09 |
Motif start | 620 |
Motif end | 694 |
Protein seq | >Pp3c22_17160V3.1 MAVSMKNVDPAFHGVGQKAGMDIWRMENFKPVLLPKESHGKFYSGDSYIVLRSTALKSGGLHYDIHFWLGKDTSQDEAGA AAIKAVELDAALGGRAVQYRETQEHETELFLSYFKPCIIPMEGGVASGFKKLEVEKVEPRLFVVKGRRSVRVAQVPFSRS SLNHDDVFVLDTESTIFQFNGETSSIQERGKALEVVQYIKDTYHDGKCDIIIVDDGTLGSEADTGQFWVLFGGFAPLTKK ATVADDAPELPKPKLLCIVEGSFKGVEISKDALDSSKCYVLDCGTELYLWAGRNTSLDARKAAISTAEGLITEHNTAKYT KITRVIEGFETLEFRSYFEKWPLNGHHTVSEEGRGKVAGILKQQGVNTKGILKGSPVKEELPSLPTLNGNLEVWRLVGGV KKEVAAGDVGKFYDHSCYVVIYTVQGEEQKEEYHLYSWTGRYTSPEDKVAATRVMNEKNAELKGRGVQAYIIQGKEPTQF LALFKCVCILKEHTHPGHKEHSIMLVRVRAAGPHIVVAVQLEPVSASLNSSDCFLLQTSSKLYAWSGNLSTAESQRAVLR VAEILKPGVIARPVKESLEPPLFWSSLGGKRKYASHCKPKENPKDPRLYVCSLSQGNLKVTEVHNFTQDDLLSDDIMIMD CHNVLYEWVGQHASSEEKEHSLDVGKKYIERAARLDGMLPDTPIFIITEGNEPTFFTSFFSWDTSKVNVNGDAYAQKIAD IQARQAPQETLQRRLTPSASAGTKSESTQRAAAMAALSSQLTSEGKLSKAAQTIITQNSASAPVSPKVHRPSAANSQRAA AMAALSFMFGSKPAPASTVSVDADWVAGSSPFTKAEATGDTDSVTSSKTSEDGGDAGEEIAEFYSYDRLKSTSTNPPPKI NIKRKEAYLSPEDFEKLFGMSRTQFYEMPKWKQDQRKRQLLLF* |
CDS seq | >Pp3c22_17160V3.1 ATGGCTGTATCTATGAAGAATGTCGACCCTGCATTTCATGGAGTCGGACAGAAAGCAGGAATGGATATATGGCGCATGGA AAATTTCAAGCCAGTACTATTGCCTAAGGAATCCCATGGAAAATTTTACTCGGGAGATTCTTACATTGTGCTCAGGTCAA CAGCATTGAAGTCTGGAGGGCTTCACTATGACATTCATTTTTGGCTTGGGAAGGATACTAGCCAGGATGAGGCTGGTGCA GCGGCAATTAAGGCCGTAGAGCTGGACGCTGCTTTAGGTGGTCGCGCGGTTCAATACAGAGAAACCCAGGAGCATGAAAC AGAGCTTTTCTTATCTTACTTCAAGCCATGCATTATTCCTATGGAAGGCGGTGTTGCTTCTGGATTCAAGAAGTTGGAGG TTGAGAAGGTCGAGCCTCGTTTGTTCGTCGTGAAAGGAAGACGCTCTGTCCGAGTTGCACAGGTGCCATTTTCTCGTTCT TCACTTAACCATGACGATGTTTTTGTTCTGGATACTGAATCTACAATCTTCCAATTCAATGGAGAAACTTCCAGCATCCA AGAGAGAGGAAAAGCTCTAGAAGTCGTCCAGTATATCAAGGATACATATCACGATGGCAAATGTGACATTATTATCGTAG ATGATGGTACTCTTGGATCCGAGGCCGACACGGGTCAGTTCTGGGTGCTGTTCGGGGGCTTTGCTCCGCTTACAAAAAAG GCCACTGTAGCAGATGATGCTCCTGAGTTACCCAAGCCCAAGCTGCTCTGTATTGTGGAAGGGAGCTTCAAGGGTGTGGA AATCTCTAAAGATGCGCTGGACAGTAGTAAGTGTTACGTTCTTGATTGCGGTACTGAGCTCTACTTATGGGCAGGTCGTA ACACTTCACTTGATGCAAGAAAGGCCGCAATTTCAACTGCAGAGGGTTTAATCACTGAACATAATACGGCGAAGTACACT AAAATCACTCGGGTCATTGAGGGATTCGAAACGCTAGAATTTCGGTCATATTTTGAGAAGTGGCCGTTGAATGGACACCA CACTGTTTCTGAAGAAGGAAGAGGCAAAGTTGCAGGTATTTTGAAGCAGCAAGGTGTTAACACAAAGGGCATTCTTAAGG GTTCGCCTGTCAAAGAAGAACTCCCATCACTTCCAACTTTGAATGGCAATCTTGAGGTATGGAGGTTGGTCGGTGGCGTA AAGAAAGAGGTTGCCGCTGGAGATGTAGGAAAGTTCTATGACCACAGCTGCTATGTCGTGATTTATACAGTTCAGGGAGA AGAACAGAAAGAAGAATATCATCTTTATAGCTGGACTGGCCGGTACACCTCTCCTGAGGACAAGGTTGCAGCAACGAGAG TTATGAATGAGAAGAATGCCGAACTTAAAGGGCGGGGAGTTCAGGCATACATTATTCAAGGGAAGGAACCCACTCAGTTC CTGGCGCTGTTCAAATGCGTTTGCATATTGAAGGAACATACCCACCCAGGTCACAAAGAACATTCAATAATGTTGGTGCG GGTGCGAGCTGCTGGTCCACACATTGTTGTAGCTGTACAACTAGAGCCGGTTTCAGCTTCACTCAACTCCTCTGATTGCT TTCTGCTTCAAACCAGCTCAAAGTTGTATGCCTGGTCAGGTAACCTGAGCACTGCCGAAAGCCAGAGGGCTGTCCTGCGA GTGGCAGAAATCTTGAAGCCTGGCGTAATAGCAAGGCCCGTGAAAGAAAGTTTAGAACCCCCACTCTTTTGGAGTTCTCT AGGGGGTAAACGGAAATATGCAAGCCACTGTAAACCAAAAGAGAATCCGAAAGATCCTAGGTTGTACGTTTGCAGTTTAT CACAAGGAAATTTGAAGGTGACTGAAGTGCACAATTTCACTCAAGATGATCTTCTGAGTGATGATATCATGATCATGGAT TGTCACAATGTCTTGTACGAGTGGGTTGGCCAGCATGCAAGTTCGGAGGAGAAAGAGCATAGTTTAGATGTTGGCAAGAA ATATATTGAGCGAGCAGCAAGGCTGGATGGGATGCTACCAGATACTCCGATTTTTATTATTACGGAAGGCAACGAGCCGA CGTTTTTCACCAGTTTCTTCTCGTGGGATACCAGCAAGGTCAATGTCAATGGAGACGCATATGCCCAAAAGATTGCTGAT ATTCAGGCGCGACAAGCACCTCAAGAGACACTCCAAAGGCGTCTTACACCAAGTGCTTCAGCCGGTACTAAAAGTGAATC CACTCAGAGGGCAGCTGCTATGGCTGCTCTTTCATCACAATTGACCTCAGAAGGAAAACTTTCTAAGGCTGCTCAAACTA TAATCACTCAGAATTCTGCCTCCGCTCCAGTAAGTCCGAAGGTTCATCGACCATCAGCTGCCAATTCACAAAGAGCTGCG GCTATGGCAGCTCTATCCTTCATGTTTGGTTCAAAACCAGCTCCAGCCTCAACGGTTTCAGTGGATGCTGATTGGGTTGC TGGGAGCTCACCCTTCACAAAAGCGGAAGCAACAGGTGATACTGATTCAGTAACTAGCTCAAAGACTTCCGAGGATGGCG GTGATGCAGGAGAGGAGATTGCTGAATTTTACAGCTATGATCGCTTGAAGTCGACATCCACAAATCCCCCTCCGAAAATC AATATAAAAAGAAAAGAGGCCTATTTATCTCCTGAAGATTTCGAGAAGCTATTTGGAATGTCGAGAACTCAGTTTTATGA GATGCCAAAGTGGAAACAGGATCAACGCAAACGTCAACTTCTGCTCTTTTAG |
Microexon DNA seq | GAAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | AAAGAGAATCCGAAAGATCCTAGGTTGTACGTTTGCAGTTTATCACAAGGAAATTTGAAGGTGACTGAAGTGCACAATTTCACTCAAGATGATCTTCTGAGTGATGAT |
Microexon-tag Amino Acid seq | KENPKDPRLYVCSLSQGNLKVTEVHNFTQDDLLSDD |
Transcript ID | Pp.14547.1 |
Gene ID | Pp.14547 |
Gene Name | NA |
Pfam domain motif | Gelsolin |
Motif E-value | 4.9e-09 |
Motif start | 620 |
Motif end | 694 |
Protein seq | >Pp.14547.1 MAVSMKNVDPAFHGVGQKAGMDIWRMENFKPVLLPKESHGKFYSGDSYIVLRSTALKSGGLHYDIHFWLGKDTSQDEAGA AAIKAVELDAALGGRAVQYRETQEHETELFLSYFKPCIIPMEGGVASGFKKLEVEKVEPRLFVVKGRRSVRVAQVPFSRS SLNHDDVFVLDTESTIFQFNGETSSIQERGKALEVVQYIKDTYHDGKCDIIIVDDGTLGSEADTGQFWVLFGGFAPLTKK ATVADDAPELPKPKLLCIVEGSFKGVEISKDALDSSKCYVLDCGTELYLWAGRNTSLDARKAAISTAEGLITEHNTAKYT KITRVIEGFETLEFRSYFEKWPLNGHHTVSEEGRGKVAGILKQQGVNTKGILKGSPVKEELPSLPTLNGNLEVWRLVGGV KKEVAAGDVGKFYDHSCYVVIYTVQGEEQKEEYHLYSWTGRYTSPEDKVAATRVMNEKNAELKGRGVQAYIIQGKEPTQF LALFKCVCILKEHTHPGHKEHSIMLVRVRAAGPHIVVAVQLEPVSASLNSSDCFLLQTSSKLYAWSGNLSTAESQRAVLR VAEILKPGVIARPVKESLEPPLFWSSLGGKRKYASHCKPKENPKDPRLYVCSLSQGNLKVTEVHNFTQDDLLSDDIMIMD CHNVLYEWVGQHASSEEKEHSLDVGKKYIERAARLDGMLPDTPIFIITEGNEPTFFTSFFSWDTSKVNVNGDAYAQKIAD IQARQAPQETLQRRLTPSASAGTKSESTQRAAAMAALSSQLTSEGKLSKAAQTIITQNSASAPVSPKVHRPSAANSQRAA AMAALSFMFGSKPAPASTVSVDADWVAGSSPFTKAEATGDTDSVTSSKTSEDGGDAGEEIAEFYSYDRLKSTSTNPPPKI NIKRKEAYLSPEDFEKLFGMSRTQFYEMPKWKQDQRKRQLLLF* |
CDS seq | >Pp.14547.1 ATGGCTGTATCTATGAAGAATGTCGACCCTGCATTTCATGGAGTCGGACAGAAAGCAGGAATGGATATATGGCGCATGGA AAATTTCAAGCCAGTACTATTGCCTAAGGAATCCCATGGAAAATTTTACTCGGGAGATTCTTACATTGTGCTCAGGTCAA CAGCATTGAAGTCTGGAGGGCTTCACTATGACATTCATTTTTGGCTTGGGAAGGATACTAGCCAGGATGAGGCTGGTGCA GCGGCAATTAAGGCCGTAGAGCTGGACGCTGCTTTAGGTGGTCGCGCGGTTCAATACAGAGAAACCCAGGAGCATGAAAC AGAGCTTTTCTTATCTTACTTCAAGCCATGCATTATTCCTATGGAAGGCGGTGTTGCTTCTGGATTCAAGAAGTTGGAGG TTGAGAAGGTCGAGCCTCGTTTGTTCGTCGTGAAAGGAAGACGCTCTGTCCGAGTTGCACAGGTGCCATTTTCTCGTTCT TCACTTAACCATGACGATGTTTTTGTTCTGGATACTGAATCTACAATCTTCCAATTCAATGGAGAAACTTCCAGCATCCA AGAGAGAGGAAAAGCTCTAGAAGTCGTCCAGTATATCAAGGATACATATCACGATGGCAAATGTGACATTATTATCGTAG ATGATGGTACTCTTGGATCCGAGGCCGACACGGGTCAGTTCTGGGTGCTGTTCGGGGGCTTTGCTCCGCTTACAAAAAAG GCCACTGTAGCAGATGATGCTCCTGAGTTACCCAAGCCCAAGCTGCTCTGTATTGTGGAAGGGAGCTTCAAGGGTGTGGA AATCTCTAAAGATGCGCTGGACAGTAGTAAGTGTTACGTTCTTGATTGCGGTACTGAGCTCTACTTATGGGCAGGTCGTA ACACTTCACTTGATGCAAGAAAGGCCGCAATTTCAACTGCAGAGGGTTTAATCACTGAACATAATACGGCGAAGTACACT AAAATCACTCGGGTCATTGAGGGATTCGAAACGCTAGAATTTCGGTCATATTTTGAGAAGTGGCCGTTGAATGGACACCA CACTGTTTCTGAAGAAGGAAGAGGCAAAGTTGCAGGTATTTTGAAGCAGCAAGGTGTTAACACAAAGGGCATTCTTAAGG GTTCGCCTGTCAAAGAAGAACTCCCATCACTTCCAACTTTGAATGGCAATCTTGAGGTATGGAGGTTGGTCGGTGGCGTA AAGAAAGAGGTTGCCGCTGGAGATGTAGGAAAGTTCTATGACCACAGCTGCTATGTCGTGATTTATACAGTTCAGGGAGA AGAACAGAAAGAAGAATATCATCTTTATAGCTGGACTGGCCGGTACACCTCTCCTGAGGACAAGGTTGCAGCAACGAGAG TTATGAATGAGAAGAATGCCGAACTTAAAGGGCGGGGAGTTCAGGCATACATTATTCAAGGGAAGGAACCCACTCAGTTC CTGGCGCTGTTCAAATGCGTTTGCATATTGAAGGAACATACCCACCCAGGTCACAAAGAACATTCAATAATGTTGGTGCG GGTGCGAGCTGCTGGTCCACACATTGTTGTAGCTGTACAACTAGAGCCGGTTTCAGCTTCACTCAACTCCTCTGATTGCT TTCTGCTTCAAACCAGCTCAAAGTTGTATGCCTGGTCAGGTAACCTGAGCACTGCCGAAAGCCAGAGGGCTGTCCTGCGA GTGGCAGAAATCTTGAAGCCTGGCGTAATAGCAAGGCCCGTGAAAGAAAGTTTAGAACCCCCACTCTTTTGGAGTTCTCT AGGGGGTAAACGGAAATATGCAAGCCACTGTAAACCAAAAGAGAATCCGAAAGATCCTAGGTTGTACGTTTGCAGTTTAT CACAAGGAAATTTGAAGGTGACTGAAGTGCACAATTTCACTCAAGATGATCTTCTGAGTGATGATATCATGATCATGGAT TGTCACAATGTCTTGTACGAGTGGGTTGGCCAGCATGCAAGTTCGGAGGAGAAAGAGCATAGTTTAGATGTTGGCAAGAA ATATATTGAGCGAGCAGCAAGGCTGGATGGGATGCTACCAGATACTCCGATTTTTATTATTACGGAAGGCAACGAGCCGA CGTTTTTCACCAGTTTCTTCTCGTGGGATACCAGCAAGGTCAATGTCAATGGAGACGCATATGCCCAAAAGATTGCTGAT ATTCAGGCGCGACAAGCACCTCAAGAGACACTCCAAAGGCGTCTTACACCAAGTGCTTCAGCCGGTACTAAAAGTGAATC CACTCAGAGGGCAGCTGCTATGGCTGCTCTTTCATCACAATTGACCTCAGAAGGAAAACTTTCTAAGGCTGCTCAAACTA TAATCACTCAGAATTCTGCCTCCGCTCCAGTAAGTCCGAAGGTTCATCGACCATCAGCTGCCAATTCACAAAGAGCTGCG GCTATGGCAGCTCTATCCTTCATGTTTGGTTCAAAACCAGCTCCAGCCTCAACGGTTTCAGTGGATGCTGATTGGGTTGC TGGGAGCTCACCCTTCACAAAAGCGGAAGCAACAGGTGATACTGATTCAGTAACTAGCTCAAAGACTTCCGAGGATGGCG GTGATGCAGGAGAGGAGATTGCTGAATTTTACAGCTATGATCGCTTGAAGTCGACATCCACAAATCCCCCTCCGAAAATC AATATAAAAAGAAAAGAGGCCTATTTATCTCCTGAAGATTTCGAGAAGCTATTTGGAATGTCGAGAACTCAGTTTTATGA GATGCCAAAGTGGAAACAGGATCAACGCAAACGTCAACTTCTGCTCTTTTAG |