
Microexon ID | Pp_18:5033402-5033412:- |
Species | Physcomitrium patens | Coordinates | 18:5033402..5033412 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | AGAGATGTTCCGAAGGATCCACGACTGTATGCTTGCAGTCTGTCACAAGGAAATTTGAAGGTGATCGAAGTACATAATTTCACACAGGATGATCTTCTGACGGAAGAT |
Microexon-tag Amino Acid Seq | RDVPKDPRLYACSLSQGNLKVIEVHNFTQDDLLTED |
Microexon-tag spanning region | 5033125-5033705 |
Microexon-tag prediction score | 0.899 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c18_7160V3.1x |
Reference Transcript ID | Pp3c18_7160V3.1 |
Gene ID | Pp3c18_7160 |
Gene Name | NA |
Transcript ID | Pp3c18_7160V3.1 |
Protein ID | Pp3c18_7160V3.1 |
Gene ID | Pp3c18_7160 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c18_7160V3.1 MAVSMKNVDIAFQGVGQKPGMEIWRIEDFKPTPLPTESYGKFYSGDSYIVLRTTALKTGGFHYDIHFWLGKNTTQDEAGT AAIKTVELDAALGGRAVQYRETQEHETDLFLSYFKPCIIPLEGGVASGFNKVEVEKVEPRLFIVKGRRAVRVSQVPFARS SLNHNDVFVLDTESTIFQFNGATSSIQERGKALEVVQYIKDTYHDGKCEVIIIDDGTLGSEADTGQFWVLFGGFAPLARK AAVADDAPKLTKPKLFCIIEASFKEVEISKDILDSSKCYLLDCGNELYIWAGRNTSLDARKAAVSTVENFITNEKRPKHS QIIRIIEGFETLEFRSHFDNWPLHEQYPISEEGRGKVAALLKQQGLNTKGILKGSPVREESPSLPSLSGKLEVWRIVCGM KKQIAAEEIGRFYENSCYIVLYTYQGEERKEEYLLCNWSGRHSPLEDKDASLKVMKDMSVALKGRAVQAYVAQGREPIQF LALFKCMCILKEPPSLGQKDNNAVMLVRVRAAGPKIVQAVQVEPSSASLNSSDCFLLQTNSKLYAWSGNLSTFESQKASL LVAEILKPGVIARAMKEGLEPPLFWSSLGGKRKYASQREARDVPKDPRLYACSLSQGNLKVIEVHNFTQDDLLTEDIMIL DCHNIIYEWIGHNTSTDNKEHSLSIAKRFLERAEKLDGAQPDTPIFILAEGYEPIFFTSFFSWDSSKVNVNGDAYSRKLA GLQGRRIPSEKPQRHLTSSSSVGAKDESTQRAAAMAALSSQLTKEGKFSKVVQNIINQNNSASAPVSPRFHRPSTANSQR AAAMAALSLMFGTKKAGLASSVSVDSDWIAGSSPFTKMEASGDTESVTSSKSEDGGDEGEEITEFFSYDRLKASPTDPDL KINVKRKEAYLSPEDFEKLFGMPRSQFYELPKWKQDQRKRNLQLF* |
CDS seq | >Pp3c18_7160V3.1 ATGGCTGTGTCCATGAAGAATGTCGACATTGCTTTTCAAGGAGTTGGGCAGAAACCAGGAATGGAAATCTGGCGCATTGA AGATTTCAAACCAACGCCCTTACCTACGGAATCCTATGGAAAATTTTACTCCGGCGATTCTTACATTGTCCTCAGGACCA CAGCACTAAAGACTGGAGGTTTCCACTACGACATTCACTTTTGGCTAGGAAAGAACACAACCCAGGATGAAGCTGGCACT GCGGCAATTAAAACAGTTGAGCTGGACGCTGCTTTAGGTGGTCGCGCTGTTCAATACAGAGAAACTCAAGAACATGAAAC GGATCTTTTTCTGTCTTACTTCAAACCTTGTATCATTCCTTTAGAAGGGGGTGTTGCTTCTGGATTCAACAAAGTGGAGG TTGAGAAGGTGGAGCCTCGTTTGTTCATTGTCAAAGGGAGGCGCGCAGTTCGAGTTTCACAGGTCCCCTTCGCCCGTTCC TCTCTAAACCATAATGATGTCTTTGTTCTGGATACGGAATCAACAATCTTTCAGTTCAACGGAGCAACGTCTAGCATCCA AGAGCGGGGAAAAGCTTTAGAAGTTGTCCAATATATCAAGGATACATATCACGATGGAAAATGTGAAGTTATCATTATAG ATGATGGTACGCTCGGGTCCGAGGCAGACACAGGGCAGTTTTGGGTTTTATTCGGGGGTTTCGCTCCACTTGCAAGGAAA GCTGCCGTTGCAGATGATGCTCCTAAGTTGACGAAACCTAAGCTTTTCTGTATCATTGAAGCCAGCTTCAAGGAAGTAGA AATCTCTAAAGACATATTGGACAGCAGCAAGTGTTATCTGCTTGATTGTGGTAATGAGCTCTACATATGGGCGGGTCGTA ATACATCTCTTGATGCACGAAAGGCTGCTGTTTCAACAGTAGAGAATTTCATCACTAATGAGAAAAGACCAAAGCACAGT CAGATTATCCGAATCATTGAGGGATTTGAAACATTAGAGTTTCGGTCACATTTTGACAACTGGCCATTACATGAACAGTA TCCTATCTCTGAAGAAGGAAGGGGCAAAGTTGCAGCTTTGTTGAAGCAGCAAGGCCTCAACACGAAGGGCATTCTTAAGG GTTCGCCTGTCCGAGAAGAATCACCATCACTTCCAAGTTTGAGTGGCAAGCTTGAGGTTTGGAGGATAGTATGTGGTATG AAGAAACAAATTGCTGCTGAAGAAATTGGAAGATTTTACGAAAACAGCTGCTACATTGTACTGTATACTTATCAAGGAGA AGAACGTAAAGAGGAATACCTTCTTTGCAATTGGAGTGGCCGGCATTCCCCTCTGGAAGATAAGGATGCGTCCCTGAAAG TTATGAAAGACATGAGTGTAGCACTTAAAGGGCGTGCAGTGCAGGCTTACGTTGCACAAGGGAGGGAACCCATTCAGTTT TTGGCGCTGTTCAAATGCATGTGCATTCTGAAGGAGCCTCCCAGTTTAGGCCAAAAAGACAATAACGCAGTAATGTTGGT GCGGGTGCGAGCTGCTGGTCCGAAAATTGTACAAGCCGTACAAGTAGAGCCTTCATCCGCTTCGCTGAACTCCTCCGATT GCTTCCTGCTTCAAACCAACTCAAAATTGTATGCCTGGTCAGGCAATCTTAGTACTTTTGAGAGTCAAAAGGCGAGTCTG CTAGTGGCGGAAATTTTGAAGCCTGGTGTTATAGCAAGGGCTATGAAAGAGGGTTTAGAGCCTCCGCTATTTTGGAGTTC TCTTGGAGGGAAACGGAAATATGCAAGTCAGAGAGAAGCAAGAGATGTTCCGAAGGATCCACGACTGTATGCTTGCAGTC TGTCACAAGGAAATTTGAAGGTGATCGAAGTACATAATTTCACACAGGATGATCTTCTGACGGAAGATATCATGATCCTG GACTGTCACAATATTATATACGAGTGGATTGGCCATAATACGAGCACAGACAACAAAGAGCATTCCTTAAGCATTGCCAA GAGATTTCTTGAACGAGCAGAAAAATTGGATGGAGCACAACCTGATACTCCCATCTTTATACTTGCAGAAGGCTACGAAC CAATATTTTTCACCTCCTTCTTCTCATGGGATTCCAGCAAGGTCAATGTCAATGGAGACGCATATTCAAGAAAGCTTGCA GGGCTTCAAGGACGACGTATTCCTTCAGAGAAACCCCAAAGACATCTTACATCAAGTTCTTCAGTTGGAGCCAAAGACGA ATCCACACAACGGGCTGCAGCTATGGCAGCTCTCTCATCGCAGTTGACGAAAGAGGGGAAGTTTTCCAAGGTTGTCCAAA ATATAATCAATCAGAATAATTCAGCCTCTGCTCCAGTGAGTCCTAGATTTCATCGACCATCAACTGCTAACTCTCAAAGA GCTGCTGCAATGGCAGCTCTATCGTTAATGTTTGGTACGAAAAAAGCAGGATTAGCCTCTTCAGTTTCAGTTGATTCTGA TTGGATCGCTGGAAGTTCGCCGTTCACGAAAATGGAGGCATCAGGGGATACAGAATCTGTAACAAGCTCTAAGTCTGAAG ATGGAGGGGATGAAGGGGAGGAAATCACCGAATTTTTCAGTTATGATCGCCTGAAAGCATCGCCCACGGATCCTGATTTA AAAATAAATGTAAAAAGAAAAGAGGCTTACTTATCTCCCGAAGATTTTGAGAAGCTGTTCGGAATGCCCAGAAGCCAGTT TTATGAGTTGCCAAAGTGGAAACAGGATCAACGCAAACGCAATTTACAACTTTTTTAG |
Microexon DNA seq | GAAATTTGAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | AGAGATGTTCCGAAGGATCCACGACTGTATGCTTGCAGTCTGTCACAAGGAAATTTGAAGGTGATCGAAGTACATAATTTCACACAGGATGATCTTCTGACGGAAGAT |
Microexon-tag Amino Acid seq | RDVPKDPRLYACSLSQGNLKVIEVHNFTQDDLLTED |
Transcript ID | Pp3c18_7160V3.1 |
Gene ID | Pp.9411 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c18_7160V3.1 MAVSMKNVDIAFQGVGQKPGMEIWRIEDFKPTPLPTESYGKFYSGDSYIVLRTTALKTGGFHYDIHFWLGKNTTQDEAGT AAIKTVELDAALGGRAVQYRETQEHETDLFLSYFKPCIIPLEGGVASGFNKVEVEKVEPRLFIVKGRRAVRVSQVPFARS SLNHNDVFVLDTESTIFQFNGATSSIQERGKALEVVQYIKDTYHDGKCEVIIIDDGTLGSEADTGQFWVLFGGFAPLARK AAVADDAPKLTKPKLFCIIEASFKEVEISKDILDSSKCYLLDCGNELYIWAGRNTSLDARKAAVSTVENFITNEKRPKHS QIIRIIEGFETLEFRSHFDNWPLHEQYPISEEGRGKVAALLKQQGLNTKGILKGSPVREESPSLPSLSGKLEVWRIVCGM KKQIAAEEIGRFYENSCYIVLYTYQGEERKEEYLLCNWSGRHSPLEDKDASLKVMKDMSVALKGRAVQAYVAQGREPIQF LALFKCMCILKEPPSLGQKDNNAVMLVRVRAAGPKIVQAVQVEPSSASLNSSDCFLLQTNSKLYAWSGNLSTFESQKASL LVAEILKPGVIARAMKEGLEPPLFWSSLGGKRKYASQREARDVPKDPRLYACSLSQGNLKVIEVHNFTQDDLLTEDIMIL DCHNIIYEWIGHNTSTDNKEHSLSIAKRFLERAEKLDGAQPDTPIFILAEGYEPIFFTSFFSWDSSKVNVNGDAYSRKLA GLQGRRIPSEKPQRHLTSSSSVGAKDESTQRAAAMAALSSQLTKEGKFSKVVQNIINQNNSASAPVSPRFHRPSTANSQR AAAMAALSLMFGTKKAGLASSVSVDSDWIAGSSPFTKMEASGDTESVTSSKSEDGGDEGEEITEFFSYDRLKASPTDPDL KINVKRKEAYLSPEDFEKLFGMPRSQFYELPKWKQDQRKRNLQLF* |
CDS seq | >Pp3c18_7160V3.1 ATGGCTGTGTCCATGAAGAATGTCGACATTGCTTTTCAAGGAGTTGGGCAGAAACCAGGAATGGAAATCTGGCGCATTGA AGATTTCAAACCAACGCCCTTACCTACGGAATCCTATGGAAAATTTTACTCCGGCGATTCTTACATTGTCCTCAGGACCA CAGCACTAAAGACTGGAGGTTTCCACTACGACATTCACTTTTGGCTAGGAAAGAACACAACCCAGGATGAAGCTGGCACT GCGGCAATTAAAACAGTTGAGCTGGACGCTGCTTTAGGTGGTCGCGCTGTTCAATACAGAGAAACTCAAGAACATGAAAC GGATCTTTTTCTGTCTTACTTCAAACCTTGTATCATTCCTTTAGAAGGGGGTGTTGCTTCTGGATTCAACAAAGTGGAGG TTGAGAAGGTGGAGCCTCGTTTGTTCATTGTCAAAGGGAGGCGCGCAGTTCGAGTTTCACAGGTCCCCTTCGCCCGTTCC TCTCTAAACCATAATGATGTCTTTGTTCTGGATACGGAATCAACAATCTTTCAGTTCAACGGAGCAACGTCTAGCATCCA AGAGCGGGGAAAAGCTTTAGAAGTTGTCCAATATATCAAGGATACATATCACGATGGAAAATGTGAAGTTATCATTATAG ATGATGGTACGCTCGGGTCCGAGGCAGACACAGGGCAGTTTTGGGTTTTATTCGGGGGTTTCGCTCCACTTGCAAGGAAA GCTGCCGTTGCAGATGATGCTCCTAAGTTGACGAAACCTAAGCTTTTCTGTATCATTGAAGCCAGCTTCAAGGAAGTAGA AATCTCTAAAGACATATTGGACAGCAGCAAGTGTTATCTGCTTGATTGTGGTAATGAGCTCTACATATGGGCGGGTCGTA ATACATCTCTTGATGCACGAAAGGCTGCTGTTTCAACAGTAGAGAATTTCATCACTAATGAGAAAAGACCAAAGCACAGT CAGATTATCCGAATCATTGAGGGATTTGAAACATTAGAGTTTCGGTCACATTTTGACAACTGGCCATTACATGAACAGTA TCCTATCTCTGAAGAAGGAAGGGGCAAAGTTGCAGCTTTGTTGAAGCAGCAAGGCCTCAACACGAAGGGCATTCTTAAGG GTTCGCCTGTCCGAGAAGAATCACCATCACTTCCAAGTTTGAGTGGCAAGCTTGAGGTTTGGAGGATAGTATGTGGTATG AAGAAACAAATTGCTGCTGAAGAAATTGGAAGATTTTACGAAAACAGCTGCTACATTGTACTGTATACTTATCAAGGAGA AGAACGTAAAGAGGAATACCTTCTTTGCAATTGGAGTGGCCGGCATTCCCCTCTGGAAGATAAGGATGCGTCCCTGAAAG TTATGAAAGACATGAGTGTAGCACTTAAAGGGCGTGCAGTGCAGGCTTACGTTGCACAAGGGAGGGAACCCATTCAGTTT TTGGCGCTGTTCAAATGCATGTGCATTCTGAAGGAGCCTCCCAGTTTAGGCCAAAAAGACAATAACGCAGTAATGTTGGT GCGGGTGCGAGCTGCTGGTCCGAAAATTGTACAAGCCGTACAAGTAGAGCCTTCATCCGCTTCGCTGAACTCCTCCGATT GCTTCCTGCTTCAAACCAACTCAAAATTGTATGCCTGGTCAGGCAATCTTAGTACTTTTGAGAGTCAAAAGGCGAGTCTG CTAGTGGCGGAAATTTTGAAGCCTGGTGTTATAGCAAGGGCTATGAAAGAGGGTTTAGAGCCTCCGCTATTTTGGAGTTC TCTTGGAGGGAAACGGAAATATGCAAGTCAGAGAGAAGCAAGAGATGTTCCGAAGGATCCACGACTGTATGCTTGCAGTC TGTCACAAGGAAATTTGAAGGTGATCGAAGTACATAATTTCACACAGGATGATCTTCTGACGGAAGATATCATGATCCTG GACTGTCACAATATTATATACGAGTGGATTGGCCATAATACGAGCACAGACAACAAAGAGCATTCCTTAAGCATTGCCAA GAGATTTCTTGAACGAGCAGAAAAATTGGATGGAGCACAACCTGATACTCCCATCTTTATACTTGCAGAAGGCTACGAAC CAATATTTTTCACCTCCTTCTTCTCATGGGATTCCAGCAAGGTCAATGTCAATGGAGACGCATATTCAAGAAAGCTTGCA GGGCTTCAAGGACGACGTATTCCTTCAGAGAAACCCCAAAGACATCTTACATCAAGTTCTTCAGTTGGAGCCAAAGACGA ATCCACACAACGGGCTGCAGCTATGGCAGCTCTCTCATCGCAGTTGACGAAAGAGGGGAAGTTTTCCAAGGTTGTCCAAA ATATAATCAATCAGAATAATTCAGCCTCTGCTCCAGTGAGTCCTAGATTTCATCGACCATCAACTGCTAACTCTCAAAGA GCTGCTGCAATGGCAGCTCTATCGTTAATGTTTGGTACGAAAAAAGCAGGATTAGCCTCTTCAGTTTCAGTTGATTCTGA TTGGATCGCTGGAAGTTCGCCGTTCACGAAAATGGAGGCATCAGGGGATACAGAATCTGTAACAAGCTCTAAGTCTGAAG ATGGAGGGGATGAAGGGGAGGAAATCACCGAATTTTTCAGTTATGATCGCCTGAAAGCATCGCCCACGGATCCTGATTTA AAAATAAATGTAAAAAGAAAAGAGGCTTACTTATCTCCCGAAGATTTTGAGAAGCTGTTCGGAATGCCCAGAAGCCAGTT TTATGAGTTGCCAAAGTGGAAACAGGATCAACGCAAACGCAATTTACAACTTTTTTAG |