
Microexon ID | Os_8:8516439-8516449:+ |
Species | Oryza sativa | Coordinates | 8:8516439..8516449 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCAATTTAAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | AGGGCAAATGAAAGTGATCCCCATCTTTTCTCATGTATCCTACCCAAAGGCAATTTAAAGATCAAAGAAATATACCACTTCACTCAAGATGATCTGATGACAGAAGAT |
Microexon-tag Amino Acid Seq | RANESDPHLFSCILPKGNLKIKEIYHFTQDDLMTED |
Microexon-tag spanning region | 8516275-8516589 |
Microexon-tag prediction score | 0.9399 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os08t0240800-01x |
Reference Transcript ID | Os08t0240800-01 |
Gene ID | Os08g0240800 |
Gene Name | VLN5 |
Transcript ID | Os08t0240800-01 |
Protein ID | Os08t0240800-01 |
Gene ID | Os08g0240800 |
Gene Name | VLN5 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os08t0240800-01 MSVSMKDLDPAFRGAGQKEGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESGT AAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHVEVNEQEHETRLYVCTGNRVVHVKEVPFA RSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTFHEGKCEVAAVEDGRLMADAEAGEFWGFFGGFAPLP RRAPVEDNEKYEETVFKLLCFNQGKLEPINYESLLHELLKTNKCYLLDCGVELFVWMGRTTSLQERKSASEAAEKLLSDD NRTKTHVIKVIEGFETVMFKSKFKEWPQTPDLKLSSEDGRGKVAALLKRQGLNVKGLMKAAPAKEEPQAYIDCTGSLQVW RINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECLIGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGK EPIQFFVIFQSFQVFKGGLSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHDGNT VFTWTGNLTTSLDQEVVERQLDIIKPNSQSRSQKEGSETDQFWSLLGGKSEYPSQKIGRANESDPHLFSCILPKGNLKIK EIYHFTQDDLMTEDVFILDCHSDIFVWVGQQVDVKVRLQALDIGEKFVKLDFLMENLSSDTPIFVIMEGSEPTFFTRFFT WDSAKSLMHGNSYQRKLSIVKGGGSPALDKPKRRTPTYSGRSTVQDKSQRSRSMSFSPERVRVRGRSPAFTALAANFESA NSRNLSTPPPVVKKLYPKSATPDSSSAPSKSSATASLTGSFDRPKSVKDGSELEKPKQEEDAKEGINTMTSRVESLTINE DVKENEPEDDEGLPVYPYDRLITTAADPVTEIDVTRRETYLSSAEFKDKFGMTKEAFSKLPKWKQNRMKIALQLF* |
CDS seq | >Os08t0240800-01 ATGTCGGTTTCTATGAAGGATTTGGATCCAGCTTTTCGTGGTGCTGGGCAAAAGGAAGGCTTGGAAATATGGCGCATCGA GAACTTCAAGCCAGTTCCTATTCCTGCGTCTTCATATGGAAAATTTTTCATGGGTGATTCTTACATCATCTTGAAGACAA CTGCCTTGAAAAATGGTTCTCTTCGACATGACATTCATTACTGGATTGGCAAAGATACTAGTCAGGATGAATCTGGAACT GCAGCAATTTTAACAGTTGAGCTTGATGCTGCACTTGGTGGACGCGCTGTTCAATACCGAGAGATACAAGGCAATGAAAC AGATAAGTTCCTCTCATATTTTAGACCATGCATCATGCCACAGCCAGGAGGAGTGGCATCTGGGTTCAAGCATGTTGAGG TCAATGAGCAGGAGCACGAAACCCGTCTGTATGTCTGTACAGGGAATCGTGTTGTTCATGTCAAAGAGGTTCCTTTTGCT CGATCGTCCCTGAATCATGATGACATATTTATTCTGGACACGAAGTCCAAAATTTTCCAGTTCAATGGCTCCAATTCGTC TATTCAAGAGCGTGCAAAGGCTCTTGAAGTCGTGCAGTACATCAAAGATACATTTCACGAGGGCAAGTGTGAAGTTGCAG CTGTTGAGGATGGCAGGTTGATGGCCGATGCTGAAGCTGGTGAATTTTGGGGTTTTTTTGGTGGCTTTGCCCCTCTACCA AGGAGAGCCCCTGTAGAAGATAATGAGAAATATGAAGAAACTGTTTTCAAATTGCTCTGTTTTAACCAAGGAAAGTTGGA GCCTATCAATTATGAATCCTTATTGCACGAGTTGCTCAAGACAAATAAGTGTTACTTGTTAGATTGTGGTGTCGAATTAT TTGTTTGGATGGGCAGAACCACATCTTTGCAGGAGAGGAAGAGTGCCAGTGAAGCTGCTGAGAAATTGCTCTCTGATGAT AACCGAACAAAAACACATGTAATCAAAGTAATTGAGGGGTTTGAGACAGTTATGTTCAAGTCAAAATTTAAAGAGTGGCC ACAGACACCTGACTTGAAATTGTCATCTGAGGATGGAAGAGGAAAAGTTGCAGCTCTTCTGAAACGCCAGGGCTTAAATG TTAAGGGCCTGATGAAAGCTGCTCCTGCAAAAGAAGAACCCCAAGCTTACATTGATTGCACTGGCAGTTTGCAGGTCTGG CGCATAAATGATAAGGACAAGATACTTCTGCCATCTGCTGACCAATCAAAATTTTACACTGGCGATTGCTACATATTTCA ATATATGTACCCTGGAGATGACAAGGAGGAGTGTCTTATTGGAAGTTGGTTTGGGAAGAAGAGCATTGAGGAGGATAGGG TAACTGCTATTTCACTTGCAAGCAAGATGGTTGAGTCTGCGAAATTTCAGGCTGTCCAGACACGACTATATGAGGGAAAA GAACCAATTCAATTCTTCGTCATATTTCAAAGCTTCCAAGTGTTTAAGGGTGGTCTAAGCTCTGGATACAAGAAATTTAT TGCTGAAAATGGTATTGATGATGACACTTATTTGGAAGATGGACTTGCGCTCTTCCGAATTCAAGGTTCAGGACCAGAAA ACATGCAGGCAATTCAAGTTGATGCTGCGGCATCGTCTTTGAATTCATCCTATTCGTACATCCTACATGATGGAAATACT GTATTCACTTGGACTGGAAACCTTACTACGTCATTAGATCAAGAGGTAGTTGAGAGGCAGCTAGACATAATTAAGCCAAA TTCGCAGTCCAGATCGCAGAAAGAAGGGTCAGAAACAGATCAATTTTGGAGCTTACTTGGAGGCAAATCTGAGTATCCAA GTCAAAAGATAGGAAGGGCAAATGAAAGTGATCCCCATCTTTTCTCATGTATCCTACCCAAAGGCAATTTAAAGATCAAA GAAATATACCACTTCACTCAAGATGATCTGATGACAGAAGATGTATTCATTCTGGACTGTCACTCAGATATATTTGTTTG GGTTGGCCAGCAGGTAGATGTCAAAGTGCGATTACAAGCTCTGGACATTGGTGAGAAATTCGTTAAGCTTGATTTCCTGA TGGAAAATCTATCCAGCGACACACCAATTTTTGTTATCATGGAAGGAAGTGAGCCTACATTTTTCACAAGGTTCTTCACT TGGGACTCAGCAAAGTCACTTATGCATGGCAATTCATACCAGAGGAAGCTTTCCATTGTAAAGGGTGGAGGTTCTCCTGC TTTGGATAAACCAAAGCGACGAACACCAACATATTCAGGGAGAAGCACTGTACAAGACAAATCTCAGCGCTCGAGGAGTA TGTCTTTCAGCCCTGAACGTGTCCGTGTTAGGGGAAGATCTCCGGCATTCACTGCATTGGCTGCTAACTTTGAAAGTGCA AACAGCAGAAATCTTTCCACCCCTCCACCCGTAGTTAAAAAACTTTACCCAAAATCTGCCACACCTGACTCATCAAGTGC ACCGTCTAAGTCATCTGCAACTGCTTCTCTCACTGGTTCTTTTGATCGCCCTAAATCAGTAAAAGATGGATCTGAGTTGG AGAAGCCAAAGCAAGAGGAAGATGCAAAAGAAGGCATTAACACCATGACCAGTAGAGTTGAATCTCTCACTATTAATGAA GATGTAAAAGAAAATGAACCAGAAGATGACGAGGGGCTCCCAGTATACCCATATGATCGCCTGATAACTACAGCTGCTGA TCCTGTCACTGAAATTGACGTTACCAGGCGAGAGACCTACTTATCTTCGGCTGAATTCAAAGACAAGTTTGGAATGACAA AGGAAGCATTCAGCAAGCTTCCAAAGTGGAAGCAAAATAGAATGAAGATCGCTCTCCAACTTTTTTAG |
Microexon DNA seq | GCAATTTAAAG |
Microexon Amino Acid seq | GNLK |
Microexon-tag DNA Seq | AGGGCAAATGAAAGTGATCCCCATCTTTTCTCATGTATCCTACCCAAAGGCAATTTAAAGATCAAAGAAATATACCACTTCACTCAAGATGATCTGATGACAGAAGAT |
Microexon-tag Amino Acid seq | RANESDPHLFSCILPKGNLKIKEIYHFTQDDLMTED |
Transcript ID | Os08t0240800-01 |
Gene ID | Os.34815 |
Gene Name | VLN5 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os08t0240800-01 MSVSMKDLDPAFRGAGQKEGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESGT AAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHVEVNEQEHETRLYVCTGNRVVHVKEVPFA RSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTFHEGKCEVAAVEDGRLMADAEAGEFWGFFGGFAPLP RRAPVEDNEKYEETVFKLLCFNQGKLEPINYESLLHELLKTNKCYLLDCGVELFVWMGRTTSLQERKSASEAAEKLLSDD NRTKTHVIKVIEGFETVMFKSKFKEWPQTPDLKLSSEDGRGKVAALLKRQGLNVKGLMKAAPAKEEPQAYIDCTGSLQVW RINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECLIGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGK EPIQFFVIFQSFQVFKGGLSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHDGNT VFTWTGNLTTSLDQEVVERQLDIIKPNSQSRSQKEGSETDQFWSLLGGKSEYPSQKIGRANESDPHLFSCILPKGNLKIK EIYHFTQDDLMTEDVFILDCHSDIFVWVGQQVDVKVRLQALDIGEKFVKLDFLMENLSSDTPIFVIMEGSEPTFFTRFFT WDSAKSLMHGNSYQRKLSIVKGGGSPALDKPKRRTPTYSGRSTVQDKSQRSRSMSFSPERVRVRGRSPAFTALAANFESA NSRNLSTPPPVVKKLYPKSATPDSSSAPSKSSATASLTGSFDRPKSVKDGSELEKPKQEEDAKEGINTMTSRVESLTINE DVKENEPEDDEGLPVYPYDRLITTAADPVTEIDVTRRETYLSSAEFKDKFGMTKEAFSKLPKWKQNRMKIALQLF* |
CDS seq | >Os08t0240800-01 ATGTCGGTTTCTATGAAGGATTTGGATCCAGCTTTTCGTGGTGCTGGGCAAAAGGAAGGCTTGGAAATATGGCGCATCGA GAACTTCAAGCCAGTTCCTATTCCTGCGTCTTCATATGGAAAATTTTTCATGGGTGATTCTTACATCATCTTGAAGACAA CTGCCTTGAAAAATGGTTCTCTTCGACATGACATTCATTACTGGATTGGCAAAGATACTAGTCAGGATGAATCTGGAACT GCAGCAATTTTAACAGTTGAGCTTGATGCTGCACTTGGTGGACGCGCTGTTCAATACCGAGAGATACAAGGCAATGAAAC AGATAAGTTCCTCTCATATTTTAGACCATGCATCATGCCACAGCCAGGAGGAGTGGCATCTGGGTTCAAGCATGTTGAGG TCAATGAGCAGGAGCACGAAACCCGTCTGTATGTCTGTACAGGGAATCGTGTTGTTCATGTCAAAGAGGTTCCTTTTGCT CGATCGTCCCTGAATCATGATGACATATTTATTCTGGACACGAAGTCCAAAATTTTCCAGTTCAATGGCTCCAATTCGTC TATTCAAGAGCGTGCAAAGGCTCTTGAAGTCGTGCAGTACATCAAAGATACATTTCACGAGGGCAAGTGTGAAGTTGCAG CTGTTGAGGATGGCAGGTTGATGGCCGATGCTGAAGCTGGTGAATTTTGGGGTTTTTTTGGTGGCTTTGCCCCTCTACCA AGGAGAGCCCCTGTAGAAGATAATGAGAAATATGAAGAAACTGTTTTCAAATTGCTCTGTTTTAACCAAGGAAAGTTGGA GCCTATCAATTATGAATCCTTATTGCACGAGTTGCTCAAGACAAATAAGTGTTACTTGTTAGATTGTGGTGTCGAATTAT TTGTTTGGATGGGCAGAACCACATCTTTGCAGGAGAGGAAGAGTGCCAGTGAAGCTGCTGAGAAATTGCTCTCTGATGAT AACCGAACAAAAACACATGTAATCAAAGTAATTGAGGGGTTTGAGACAGTTATGTTCAAGTCAAAATTTAAAGAGTGGCC ACAGACACCTGACTTGAAATTGTCATCTGAGGATGGAAGAGGAAAAGTTGCAGCTCTTCTGAAACGCCAGGGCTTAAATG TTAAGGGCCTGATGAAAGCTGCTCCTGCAAAAGAAGAACCCCAAGCTTACATTGATTGCACTGGCAGTTTGCAGGTCTGG CGCATAAATGATAAGGACAAGATACTTCTGCCATCTGCTGACCAATCAAAATTTTACACTGGCGATTGCTACATATTTCA ATATATGTACCCTGGAGATGACAAGGAGGAGTGTCTTATTGGAAGTTGGTTTGGGAAGAAGAGCATTGAGGAGGATAGGG TAACTGCTATTTCACTTGCAAGCAAGATGGTTGAGTCTGCGAAATTTCAGGCTGTCCAGACACGACTATATGAGGGAAAA GAACCAATTCAATTCTTCGTCATATTTCAAAGCTTCCAAGTGTTTAAGGGTGGTCTAAGCTCTGGATACAAGAAATTTAT TGCTGAAAATGGTATTGATGATGACACTTATTTGGAAGATGGACTTGCGCTCTTCCGAATTCAAGGTTCAGGACCAGAAA ACATGCAGGCAATTCAAGTTGATGCTGCGGCATCGTCTTTGAATTCATCCTATTCGTACATCCTACATGATGGAAATACT GTATTCACTTGGACTGGAAACCTTACTACGTCATTAGATCAAGAGGTAGTTGAGAGGCAGCTAGACATAATTAAGCCAAA TTCGCAGTCCAGATCGCAGAAAGAAGGGTCAGAAACAGATCAATTTTGGAGCTTACTTGGAGGCAAATCTGAGTATCCAA GTCAAAAGATAGGAAGGGCAAATGAAAGTGATCCCCATCTTTTCTCATGTATCCTACCCAAAGGCAATTTAAAGATCAAA GAAATATACCACTTCACTCAAGATGATCTGATGACAGAAGATGTATTCATTCTGGACTGTCACTCAGATATATTTGTTTG GGTTGGCCAGCAGGTAGATGTCAAAGTGCGATTACAAGCTCTGGACATTGGTGAGAAATTCGTTAAGCTTGATTTCCTGA TGGAAAATCTATCCAGCGACACACCAATTTTTGTTATCATGGAAGGAAGTGAGCCTACATTTTTCACAAGGTTCTTCACT TGGGACTCAGCAAAGTCACTTATGCATGGCAATTCATACCAGAGGAAGCTTTCCATTGTAAAGGGTGGAGGTTCTCCTGC TTTGGATAAACCAAAGCGACGAACACCAACATATTCAGGGAGAAGCACTGTACAAGACAAATCTCAGCGCTCGAGGAGTA TGTCTTTCAGCCCTGAACGTGTCCGTGTTAGGGGAAGATCTCCGGCATTCACTGCATTGGCTGCTAACTTTGAAAGTGCA AACAGCAGAAATCTTTCCACCCCTCCACCCGTAGTTAAAAAACTTTACCCAAAATCTGCCACACCTGACTCATCAAGTGC ACCGTCTAAGTCATCTGCAACTGCTTCTCTCACTGGTTCTTTTGATCGCCCTAAATCAGTAAAAGATGGATCTGAGTTGG AGAAGCCAAAGCAAGAGGAAGATGCAAAAGAAGGCATTAACACCATGACCAGTAGAGTTGAATCTCTCACTATTAATGAA GATGTAAAAGAAAATGAACCAGAAGATGACGAGGGGCTCCCAGTATACCCATATGATCGCCTGATAACTACAGCTGCTGA TCCTGTCACTGAAATTGACGTTACCAGGCGAGAGACCTACTTATCTTCGGCTGAATTCAAAGACAAGTTTGGAATGACAA AGGAAGCATTCAGCAAGCTTCCAAAGTGGAAGCAAAATAGAATGAAGATCGCTCTCCAACTTTTTTAG |