Microexon ID Os_6:27138029-27138039:-
Species Oryza sativa
Coordinates 6:27138029..27138039
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAGTGCTTAAG
Microexon Amino Acid seq GVLK
Microexon-tag DNA Seq AAAGATCAAGAAAGTGATCCTCATTTGTTCTCTTGTACTTTTTCAAAGGGAGTGCTTAAGGTTAGAGAAATATTCAACTTTACTCAAGATGATTTGATGACAGAGGAC
Microexon-tag Amino Acid Seq KDQESDPHLFSCTFSKGVLKVREIFNFTQDDLMTED
Microexon-tag spanning region27137893-27138223
Microexon-tag prediction score0.961
Overlapped with the annotated transcript (%) 100
New Transcript ID Os06t0659300-01x
Reference Transcript ID Os06t0659300-01
Gene ID Os06g0659300
Gene Name VLN3
Transcript ID Os06t0659300-01
Protein ID Os06t0659300-01
Gene ID Os06g0659300
Gene Name VLN3
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os06t0659300-01
MVPKKVWGVQQLNPMPHARSATGEHTFSSLLKQKSPKTSPTKPRGSMAVSMREVDAVFQGAGQKDGLEIWRIEKLQAVPV
PKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGNETERFLSYF
KPCIIPEEGGIASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKA
LEVVQYLKDSNHEGKCDVGSVEDGKLMADADAGEFWGLFGGFAPLPRKTFSDLNGKDSAFSSKLICLNKGQTVPVDFDVL
TRELLDSTKCYLLDCGSEIYVWMGRETPLEERKRAGSAAEELLREVNRPKSHIVRLMEGFETVIFRSKFSKWPKKADAVV
SDESRGKVAALLKRQGFNVKGLAKAAPVKEEPQPQIDCTGNLQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEG
EECLIGTWFGKKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQNLVIFKGGVSTGYKKFVSENGIEDD
TYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTLFTWIGNLSSSMDQELAERQLDVIKPNLQSRMLKE
GSEYDQFWKLLGVKSEYPSQKIAKDQESDPHLFSCTFSKGVLKVREIFNFTQDDLMTEDVFILDCHSCVFVWVGQRVDTK
MRAQALSVGEKFLELDILMENSSQETPVYVITEGSEPQFFTRFFTWDSAKSAMHGNSFERRLSIVKDGVKPKLDKPKRRP
TTSSSHTGRSSVPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPAIRKPSPKSPSSDPTKPPQRAA
SIAAISASFERPRPTLIPKSIKASPDVNKPQVEASKPKPEANGKDSTPSKDSPTVTPTIQEDLKEGQPENEEGLPVYPYE
RLRTSSINPVTDIDVTKRETYLSAAEFRERFGMTKEAFAKLPKWKQNRLKIALQLF*
CDS seq >Os06t0659300-01
ATGGTTCCCAAAAAGGTTTGGGGGGTTCAACAGCTGAACCCCATGCCCCATGCTAGATCCGCCACTGGGGAGCACACATT
TTCTTCTCTCCTGAAGCAAAAATCACCCAAGACCAGCCCTACAAAACCTAGGGGTTCTATGGCTGTTTCAATGAGGGAAG
TGGATGCGGTCTTTCAAGGGGCTGGTCAAAAAGATGGATTGGAAATATGGCGGATTGAAAAACTGCAAGCTGTTCCAGTT
CCCAAGGAATCACATGGGAGATTTTTCACAGGAGATTCCTATGTGATATTGAAGACAACCGCTCTTAAAAATGGTTCTTT
TCGGCATGATATCCATTATTGGCTTGGTAAAGATACCAGTCAGGATGAAGCTGGTACAGCTGCAATCAAGACTGTGGAAT
TGGATGCTGCTCTTGGTGGACGTGCTGTTCAATACCGTGAAGTACAGGGGAATGAGACAGAGAGATTTCTTTCATATTTT
AAACCTTGTATTATACCAGAGGAAGGTGGAATTGCATCTGGTTTCAGGCATACTGAAATCAATGAACGGGAGCATGTGAC
AAGGTTATTTGTCTGCAGAGGAAAGCATACAGTCCATGTCAAAGAGGTTCCGTTTGCAAGATCATCGCTGAACCATGATG
ATATATTTATTTTAGATACAAAGTCCAAAATATTCCAGTTCAATGGATCGAATTCAAGTATTCAGGAGAGGGCTAAAGCC
CTTGAGGTTGTGCAATATTTGAAAGACAGCAACCATGAGGGCAAATGTGACGTAGGTTCAGTTGAGGACGGCAAGCTGAT
GGCAGATGCTGACGCCGGTGAATTCTGGGGTCTCTTTGGTGGATTTGCACCTCTTCCAAGAAAAACCTTTTCTGATCTTA
ATGGAAAAGATTCTGCTTTCTCTTCGAAGTTGATCTGTCTAAATAAGGGTCAGACAGTACCAGTTGATTTTGATGTTCTA
ACAAGAGAGTTGCTAGATTCAACAAAGTGCTATCTGCTAGACTGTGGATCTGAAATTTATGTCTGGATGGGTAGAGAGAC
ACCACTCGAAGAGAGGAAACGGGCAGGATCTGCTGCAGAGGAATTACTTCGTGAAGTAAACAGGCCAAAATCTCATATTG
TTCGTCTCATGGAAGGATTTGAGACTGTCATATTCCGATCAAAATTCAGTAAATGGCCTAAGAAAGCTGATGCTGTTGTG
TCTGATGAGAGCAGAGGAAAAGTTGCAGCTCTTCTTAAGCGGCAAGGATTTAATGTTAAGGGTCTTGCAAAAGCTGCTCC
TGTGAAGGAAGAGCCTCAACCTCAAATTGATTGCACAGGCAACCTGCAGGTTTGGCGTGTAAATGGCACTGAAAAGACAT
TCCTTTCATTCTCTGAGCAATGCAAATTCTACAGTGGGGACTGTTATATCTTTCAATATAGCTATCCTGGTGAGGAAGGC
GAGGAGTGTCTCATTGGTACTTGGTTCGGGAAAAAGAGTGTTCAGGACGAGAAGACTACAGCCATTTCAGTTGCTAGCAA
GATGGTTGAGTCTCTGAAATTTCAGGCAGTCATGGTTCGCCTTTATGAAGGAAAGGAACCAGCTGAGTTTTTCTCAATAT
TTCAGAACCTGGTTATCTTCAAGGGTGGTGTTAGTACTGGGTATAAGAAATTTGTCTCAGAAAACGGTATTGAGGATGAC
ACATATTCAGAAAATGGGGTTGCCCTTTTCCGGGTTCAAGGCTCTGGACCAGAAAATATGCAAGCCATTCAAGTTGATAC
GGCTGCTACCTCGCTGAACTCTTCTTATTGTTATGTACTACATGATGGAGATACACTATTTACATGGATTGGGAATTTAA
GCTCGTCAATGGATCAAGAGCTTGCTGAGAGGCAGCTGGATGTGATCAAGCCAAATCTTCAGTCCAGAATGCTCAAGGAA
GGGTCAGAATATGATCAGTTTTGGAAGCTACTTGGAGTCAAGTCAGAGTACCCCAGCCAGAAGATTGCAAAAGATCAAGA
AAGTGATCCTCATTTGTTCTCTTGTACTTTTTCAAAGGGAGTGCTTAAGGTTAGAGAAATATTCAACTTTACTCAAGATG
ATTTGATGACAGAGGACGTTTTTATTTTGGACTGTCATTCATGTGTCTTCGTATGGGTTGGACAACGTGTGGACACAAAA
ATGCGAGCACAAGCTTTGAGCGTTGGAGAGAAATTTTTAGAACTTGACATTTTGATGGAGAACTCATCACAAGAAACACC
AGTTTATGTCATCACTGAAGGGAGTGAGCCCCAATTTTTCACCAGGTTCTTCACTTGGGACTCTGCAAAATCAGCCATGC
ATGGAAACTCATTTGAAAGGAGGTTATCTATAGTGAAGGATGGAGTAAAACCAAAATTAGATAAACCTAAAAGAAGGCCA
ACGACATCATCATCACACACTGGACGATCCAGTGTACCTGAAAAATCTCAGCGCTCCAGAAGTATGTCGTTCAGTCCTGA
CCGTGTAAGAGTCAGAGGAAGATCCCCAGCATTCAATGCATTAGCTGCTAACTTTGAGAACCCAAATGCTCGGAATCTAT
CAACACCTCCACCAGCTATCAGAAAACCATCTCCGAAGTCCCCCTCTTCAGATCCTACAAAGCCACCTCAACGAGCTGCT
TCAATTGCTGCAATTTCTGCTTCTTTCGAGCGACCTAGGCCAACTCTGATACCAAAGTCAATCAAAGCGAGTCCTGATGT
AAACAAGCCCCAAGTTGAAGCAAGCAAGCCTAAACCAGAGGCAAATGGCAAGGATAGTACCCCTTCAAAGGATAGCCCAA
CAGTAACTCCAACGATACAGGAAGATCTGAAGGAGGGACAGCCAGAAAACGAGGAAGGGCTCCCAGTGTATCCATACGAA
CGCTTGAGGACATCTTCCATCAATCCTGTGACAGACATTGATGTGACTAAGCGTGAGACATATCTATCTGCGGCGGAGTT
CAGGGAAAGGTTTGGGATGACAAAGGAAGCTTTTGCGAAGCTACCAAAGTGGAAGCAGAATAGGTTAAAGATTGCCCTTC
AGCTGTTTTAA
Microexon DNA seq GAGTGCTTAAG
Microexon Amino Acid seq GVLK
Microexon-tag DNA Seq AAAGATCAAGAAAGTGATCCTCATTTGTTCTCTTGTACTTTTTCAAAGGGAGTGCTTAAGGTTAGAGAAATATTCAACTTTACTCAAGATGATTTGATGACAGAGGAC
Microexon-tag Amino Acid seq KDQESDPHLFSCTFSKGVLKVREIFNFTQDDLMTED
Transcript ID Os.30468.1
Gene ID Os.30468
Gene Name VLN3
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Os.30468.1
MAVSMREVDAVFQGAGQKDGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAGT
AAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFA
RSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDSNHEGKCDVGSVEDGKLMADADAGEFWGLFGGFAPLP
RKTFSDLNGKDSAFSSKLICLNKGQTVPVDFDVLTRELLDSTKCYLLDCGSEIYVWMGRETPLEERKRAGSAAEELLREV
NRPKSHIVRLMEGFETVIFRSKFSKWPKKADAVVSDESRGKVAALLKRQGFNVKGLAKAAPVKEEPQPQIDCTGNLQVWR
VNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECLIGTWFGKKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKE
PAEFFSIFQNLVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTL
FTWIGNLSSSMDQELAERQLDVIKPNLQSRMLKEGSEYDQFWKLLGVKSEYPSQKIAKDQESDPHLFSCTFSKGVLKVRE
IFNFTQDDLMTEDVFILDCHSCVFVWVGQRVDTKMRAQALSVGEKFLELDILMENSSQETPVYVITEGSEPQFFTRFFTW
DSAKSAMHGNSFERRLSIVKDGVKPKLDKPKRRPTTSSSHTGRSSVPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFE
NPNARNLSTPPPAIRKPSPKSPSSDPTKPPQRAASIAAISASFERPRPTLIPKSIKASPDVNKPQVEASKPKPEANGKDS
TPSKDSPTVTPTIQEDLKEGQPENEEGLPVYPYERLRTSSINPVTDIDVTKRETYLSAAEFRERFGMTKEAFAKLPKWKQ
NRLKIALQLF*
CDS seq >Os.30468.1
ATGGCTGTTTCAATGAGGGAAGTGGATGCGGTCTTTCAAGGGGCTGGTCAAAAAGATGGATTGGAAATATGGCGGATTGA
AAAACTGCAAGCTGTTCCAGTTCCCAAGGAATCACATGGGAGATTTTTCACAGGAGATTCCTATGTGATATTGAAGACAA
CCGCTCTTAAAAATGGTTCTTTTCGGCATGATATCCATTATTGGCTTGGTAAAGATACCAGTCAGGATGAAGCTGGTACA
GCTGCAATCAAGACTGTGGAATTGGATGCTGCTCTTGGTGGACGTGCTGTTCAATACCGTGAAGTACAGGGGAATGAGAC
AGAGAGATTTCTTTCATATTTTAAACCTTGTATTATACCAGAGGAAGGTGGAATTGCATCTGGTTTCAGGCATACTGAAA
TCAATGAACGGGAGCATGTGACAAGGTTATTTGTCTGCAGAGGAAAGCATACAGTCCATGTCAAAGAGGTTCCGTTTGCA
AGATCATCGCTGAACCATGATGATATATTTATTTTAGATACAAAGTCCAAAATATTCCAGTTCAATGGATCGAATTCAAG
TATTCAGGAGAGGGCTAAAGCCCTTGAGGTTGTGCAATATTTGAAAGACAGCAACCATGAGGGCAAATGTGACGTAGGTT
CAGTTGAGGACGGCAAGCTGATGGCAGATGCTGACGCCGGTGAATTCTGGGGTCTCTTTGGTGGATTTGCACCTCTTCCA
AGAAAAACCTTTTCTGATCTTAATGGAAAAGATTCTGCTTTCTCTTCGAAGTTGATCTGTCTAAATAAGGGTCAGACAGT
ACCAGTTGATTTTGATGTTCTAACAAGAGAGTTGCTAGATTCAACAAAGTGCTATCTGCTAGACTGTGGATCTGAAATTT
ATGTCTGGATGGGTAGAGAGACACCACTCGAAGAGAGGAAACGGGCAGGATCTGCTGCAGAGGAATTACTTCGTGAAGTA
AACAGGCCAAAATCTCATATTGTTCGTCTCATGGAAGGATTTGAGACTGTCATATTCCGATCAAAATTCAGTAAATGGCC
TAAGAAAGCTGATGCTGTTGTGTCTGATGAGAGCAGAGGAAAAGTTGCAGCTCTTCTTAAGCGGCAAGGATTTAATGTTA
AGGGTCTTGCAAAAGCTGCTCCTGTGAAGGAAGAGCCTCAACCTCAAATTGATTGCACAGGCAACCTGCAGGTTTGGCGT
GTAAATGGCACTGAAAAGACATTCCTTTCATTCTCTGAGCAATGCAAATTCTACAGTGGGGACTGTTATATCTTTCAATA
TAGCTATCCTGGTGAGGAAGGCGAGGAGTGTCTCATTGGTACTTGGTTCGGGAAAAAGAGTGTTCAGGACGAGAAGACTA
CAGCCATTTCAGTTGCTAGCAAGATGGTTGAGTCTCTGAAATTTCAGGCAGTCATGGTTCGCCTTTATGAAGGAAAGGAA
CCAGCTGAGTTTTTCTCAATATTTCAGAACCTGGTTATCTTCAAGGGTGGTGTTAGTACTGGGTATAAGAAATTTGTCTC
AGAAAACGGTATTGAGGATGACACATATTCAGAAAATGGGGTTGCCCTTTTCCGGGTTCAAGGCTCTGGACCAGAAAATA
TGCAAGCCATTCAAGTTGATACGGCTGCTACCTCGCTGAACTCTTCTTATTGTTATGTACTACATGATGGAGATACACTA
TTTACATGGATTGGGAATTTAAGCTCGTCAATGGATCAAGAGCTTGCTGAGAGGCAGCTGGATGTGATCAAGCCAAATCT
TCAGTCCAGAATGCTCAAGGAAGGGTCAGAATATGATCAGTTTTGGAAGCTACTTGGAGTCAAGTCAGAGTACCCCAGCC
AGAAGATTGCAAAAGATCAAGAAAGTGATCCTCATTTGTTCTCTTGTACTTTTTCAAAGGGAGTGCTTAAGGTTAGAGAA
ATATTCAACTTTACTCAAGATGATTTGATGACAGAGGACGTTTTTATTTTGGACTGTCATTCATGTGTCTTCGTATGGGT
TGGACAACGTGTGGACACAAAAATGCGAGCACAAGCTTTGAGCGTTGGAGAGAAATTTTTAGAACTTGACATTTTGATGG
AGAACTCATCACAAGAAACACCAGTTTATGTCATCACTGAAGGGAGTGAGCCCCAATTTTTCACCAGGTTCTTCACTTGG
GACTCTGCAAAATCAGCCATGCATGGAAACTCATTTGAAAGGAGGTTATCTATAGTGAAGGATGGAGTAAAACCAAAATT
AGATAAACCTAAAAGAAGGCCAACGACATCATCATCACACACTGGACGATCCAGTGTACCTGAAAAATCTCAGCGCTCCA
GAAGTATGTCGTTCAGTCCTGACCGTGTAAGAGTCAGAGGAAGATCCCCAGCATTCAATGCATTAGCTGCTAACTTTGAG
AACCCAAATGCTCGGAATCTATCAACACCTCCACCAGCTATCAGAAAACCATCTCCGAAGTCCCCCTCTTCAGATCCTAC
AAAGCCACCTCAACGAGCTGCTTCAATTGCTGCAATTTCTGCTTCTTTCGAGCGACCTAGGCCAACTCTGATACCAAAGT
CAATCAAAGCGAGTCCTGATGTAAACAAGCCCCAAGTTGAAGCAAGCAAGCCTAAACCAGAGGCAAATGGCAAGGATAGT
ACCCCTTCAAAGGATAGCCCAACAGTAACTCCAACGATACAGGAAGATCTGAAGGAGGGACAGCCAGAAAACGAGGAAGG
GCTCCCAGTGTATCCATACGAACGCTTGAGGACATCTTCCATCAATCCTGTGACAGACATTGATGTGACTAAGCGTGAGA
CATATCTATCTGCGGCGGAGTTCAGGGAAAGGTTTGGGATGACAAAGGAAGCTTTTGCGAAGCTACCAAAGTGGAAGCAG
AATAGGTTAAAGATTGCCCTTCAGCTGTTTTAA