
Microexon ID | Os_4:30466049-30466059:- |
Species | Oryza sativa | Coordinates | 4:30466049..30466059 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAATCTAAAG |
Microexon Amino Acid seq | ENLK |
Microexon-tag DNA Seq | AAAGAAAATGAAAGCGACCCTCATCTTTTCTCATGTATCTTATCCAAGGAAAATCTAAAGGTCAAGGAAATACACCACTTTACTCAGGATGACCTGATGGCAGAAGAT |
Microexon-tag Amino Acid Seq | KENESDPHLFSCILSKENLKVKEIHHFTQDDLMAED |
Microexon-tag spanning region | 30465906-30466233 |
Microexon-tag prediction score | 0.9278 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0604000-01x |
Reference Transcript ID | Os04t0604000-01 |
Gene ID | Os04g0604000 |
Gene Name | VLN4 |
Transcript ID | Os04t0604000-01 |
Protein ID | Os04t0604000-01 |
Gene ID | Os04g0604000 |
Gene Name | VLN4 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os04t0604000-01 MSISMKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAGT AAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQDHVTRLYVCQGKHVVHVKEVPFV RSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVVQYIKDTFHEGKCEVAAVEDGKLMADTEAGEFWGLFGGFAPLP KKTSSEDNGDDKETVTKLLCFNQGTLEHISFESLEHELLETNKCYLLDCGAEMYVWMGRGTSLQVRKGASEAAEKLLIDE NRKGSNVIKVIEGFETIMFKSKFNKWPPTPDLKLSSEDGRGKVAALLRSQGLDVKGLMKAAPEEEEPQPYIDCTGHLQVW RVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECLIGTWFGKKSVEEDRTSAISLASKMFQAAKFQAAQARLYEGK EPIQFFVIFQSLQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNT VFTWTGNLTTSLDNDLVERQLDVIKPDLPSRSQKEGRETDQFWELLGGKCKYSNKKIGKENESDPHLFSCILSKENLKVK EIHHFTQDDLMAEDIFVLDCRTDLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQDTPIFIVTEGSEPQFFTRFFT WDSAKSLMHGSSYQRKLAIVKGGATPSLDKPKRRTPAFSGRNAGQDKSQQRTRSMSHSPERHRIRGRSPAFTAIASAFEN PSTRYLSTPPPAVKKLFPRSGGSELPKTSSKQSAINALTSAFEGPTKSTIPKSVKASPEAEKAIQEEGSTIGESENEPED DENSTIYPYERLTTTSDDPAPDIDVTKREVYLSSVEFTEKFGMTRASFKNLPKWKQNRLKSDLQLF* |
CDS seq | >Os04t0604000-01 ATGTCAATTTCTATGAAAGATGTAGATCCGGCTTTCCGTGGAGTTGGACAAAAGGATGGTTTGGAGGTATGGCGTATTGA AAACTTCAAGCCTGTTCCCGTGCCAACATCTTCACACGGAAAATTTTACATGGGTGATTCATATATCATCTTGAAGACGA CAGCCTTGAAAAATGGTTCATTTCGCCATGATCTCCACTACTGGCTTGGAAAGGATACTAGTCAGGACGAAGCTGGAACT GCTGCAATTCTAACTGTGGAGCTTGATGCTGCCCTTGGAGGGCGTGCTGTCCAGTACAGGGAAGTACAAGGCGGTGAAAC TGAAAAGCTTCTCTCCTATTTTAGACCATGCATCATGCCACAGCCAGGAGGGGTAGCTTCTGGGTTCAATCATGTAGAGG TCAATCAGCAAGATCATGTTACCCGCTTATATGTGTGCCAAGGAAAGCATGTTGTTCATGTTAAAGAGGTTCCTTTTGTT CGTTCATCCCTTAATCACGAGGACATATTCATTTTGGATACCGCGAACAAAATTTTCCAGTTCAATGGCTCTAACTCATG CATTCAAGAGAGAGCAAAAGCTCTTGAAGTTGTGCAATATATCAAAGATACTTTCCATGAGGGCAAGTGCGAAGTTGCAG CTGTTGAGGATGGAAAGTTGATGGCCGATACTGAAGCTGGTGAATTTTGGGGTTTGTTTGGTGGTTTTGCTCCTCTCCCA AAGAAGACATCTTCAGAGGACAATGGGGATGATAAGGAAACTGTGACCAAATTGCTATGTTTTAACCAAGGAACGCTGGA GCATATTAGTTTTGAATCTTTGGAGCATGAGTTACTTGAGACAAACAAATGCTACTTGTTGGACTGTGGAGCTGAAATGT ATGTTTGGATGGGCAGAGGTACTTCTTTGCAAGTGAGAAAGGGTGCAAGTGAAGCTGCTGAGAAATTGCTCATTGATGAG AACCGAAAAGGATCAAATGTTATCAAAGTGATTGAGGGATTCGAAACAATCATGTTCAAGTCAAAATTTAACAAGTGGCC GCCTACTCCTGATTTGAAGCTGTCATCTGAGGATGGCCGAGGCAAAGTGGCAGCTCTACTCAGAAGTCAAGGATTGGATG TTAAAGGATTGATGAAGGCTGCTCCTGAAGAAGAAGAACCCCAACCTTATATTGATTGCACTGGTCATTTACAGGTCTGG CGAGTAAATGGCGATGGCAAGACTCTTCTTTCATCTTCTGATCAATCAAAACTTTACACCGGAGATTGCTACATTTTTCA ATACACATACACTGGAGATGATAAGGAGGAATGTCTTATTGGAACTTGGTTTGGGAAGAAGAGTGTTGAGGAGGACAGAA CATCGGCAATTTCACTAGCTAGCAAGATGTTTCAGGCTGCAAAATTCCAGGCTGCCCAGGCTCGCCTCTATGAAGGGAAA GAACCGATTCAATTTTTCGTCATATTTCAGAGTCTTCAAGTTTTTAAGGGTGGACTTAGCTCTGGATACAAGAACTTTAT TGCTGTAAATGGTACCGATGACGACACTTACGTTGAAGGTGGGCTTGCTCTCTTCCGGATTCAAGGCTCAGGATCAGAAA ACATGCAAGCAATTCAAGTTGATGCAGTGTCTTCGTCATTAAATTCATCCTACTGCTACATTCTACACAATGGAAACACT GTGTTCACATGGACTGGGAACCTTACAACCTCACTGGATAATGACTTGGTTGAGAGACAGCTAGATGTAATTAAGCCAGA TCTGCCATCCAGGTCACAAAAGGAGGGGAGAGAAACCGACCAATTCTGGGAACTCTTAGGTGGAAAATGCAAGTATTCAA ACAAAAAAATAGGAAAAGAAAATGAAAGCGACCCTCATCTTTTCTCATGTATCTTATCCAAGGAAAATCTAAAGGTCAAG GAAATACACCACTTTACTCAGGATGACCTGATGGCAGAAGATATTTTCGTTCTAGACTGCCGCACCGACTTGTTTGTTTG GGTTGGACAGGAGGTGGATGCCAAATTGAGATCACAAGCGATGGACATCGGTGAGAAATTTCTTCTACATGATTTCCTTA TGGAAAATCTCTCGCAAGACACACCAATTTTTATTGTTACAGAAGGAAGTGAGCCACAGTTTTTTACTAGGTTCTTCACT TGGGACTCAGCAAAATCGCTGATGCATGGCAGTTCATACCAGAGGAAGCTTGCAATAGTAAAGGGTGGAGCAACTCCATC GCTTGATAAACCTAAAAGGCGAACACCAGCGTTTTCAGGAAGGAACGCAGGACAAGATAAATCTCAGCAGCGCACAAGAA GTATGTCCCACAGCCCAGAACGTCACCGTATTCGAGGAAGATCTCCAGCTTTCACCGCAATAGCTTCTGCCTTTGAGAAC CCAAGTACCCGGTATCTTTCCACCCCTCCCCCTGCTGTCAAGAAGCTTTTCCCAAGATCCGGAGGGTCTGAATTGCCAAA GACATCATCCAAACAATCAGCTATCAATGCTCTCACCAGTGCTTTCGAGGGTCCTACGAAAAGTACAATACCTAAGTCTG TAAAAGCGAGCCCCGAGGCAGAGAAGGCAATACAGGAGGAAGGCTCAACGATCGGTGAAAGTGAAAACGAGCCAGAAGAT GATGAGAACAGCACAATCTACCCATATGAACGTTTGACCACCACATCTGATGATCCTGCTCCTGACATTGATGTTACCAA GCGAGAGGTCTACTTATCATCAGTTGAGTTCACAGAGAAGTTTGGCATGACAAGGGCATCATTCAAAAACCTTCCAAAAT GGAAGCAAAACAGGCTAAAGTCTGATCTCCAGCTCTTTTAG |
Microexon DNA seq | AAAATCTAAAG |
Microexon Amino Acid seq | ENLK |
Microexon-tag DNA Seq | AAAGAAAATGAAAGCGACCCTCATCTTTTCTCATGTATCTTATCCAAGGAAAATCTAAAGGTCAAGGAAATACACCACTTTACTCAGGATGACCTGATGGCAGAAGAT |
Microexon-tag Amino Acid seq | KENESDPHLFSCILSKENLKVKEIHHFTQDDLMAED |
Transcript ID | Os04t0604000-01 |
Gene ID | Os.23969 |
Gene Name | VLN4 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os04t0604000-01 MSISMKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAGT AAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQDHVTRLYVCQGKHVVHVKEVPFV RSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVVQYIKDTFHEGKCEVAAVEDGKLMADTEAGEFWGLFGGFAPLP KKTSSEDNGDDKETVTKLLCFNQGTLEHISFESLEHELLETNKCYLLDCGAEMYVWMGRGTSLQVRKGASEAAEKLLIDE NRKGSNVIKVIEGFETIMFKSKFNKWPPTPDLKLSSEDGRGKVAALLRSQGLDVKGLMKAAPEEEEPQPYIDCTGHLQVW RVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECLIGTWFGKKSVEEDRTSAISLASKMFQAAKFQAAQARLYEGK EPIQFFVIFQSLQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLALFRIQGSGSENMQAIQVDAVSSSLNSSYCYILHNGNT VFTWTGNLTTSLDNDLVERQLDVIKPDLPSRSQKEGRETDQFWELLGGKCKYSNKKIGKENESDPHLFSCILSKENLKVK EIHHFTQDDLMAEDIFVLDCRTDLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQDTPIFIVTEGSEPQFFTRFFT WDSAKSLMHGSSYQRKLAIVKGGATPSLDKPKRRTPAFSGRNAGQDKSQQRTRSMSHSPERHRIRGRSPAFTAIASAFEN PSTRYLSTPPPAVKKLFPRSGGSELPKTSSKQSAINALTSAFEGPTKSTIPKSVKASPEAEKAIQEEGSTIGESENEPED DENSTIYPYERLTTTSDDPAPDIDVTKREVYLSSVEFTEKFGMTRASFKNLPKWKQNRLKSDLQLF* |
CDS seq | >Os04t0604000-01 ATGTCAATTTCTATGAAAGATGTAGATCCGGCTTTCCGTGGAGTTGGACAAAAGGATGGTTTGGAGGTATGGCGTATTGA AAACTTCAAGCCTGTTCCCGTGCCAACATCTTCACACGGAAAATTTTACATGGGTGATTCATATATCATCTTGAAGACGA CAGCCTTGAAAAATGGTTCATTTCGCCATGATCTCCACTACTGGCTTGGAAAGGATACTAGTCAGGACGAAGCTGGAACT GCTGCAATTCTAACTGTGGAGCTTGATGCTGCCCTTGGAGGGCGTGCTGTCCAGTACAGGGAAGTACAAGGCGGTGAAAC TGAAAAGCTTCTCTCCTATTTTAGACCATGCATCATGCCACAGCCAGGAGGGGTAGCTTCTGGGTTCAATCATGTAGAGG TCAATCAGCAAGATCATGTTACCCGCTTATATGTGTGCCAAGGAAAGCATGTTGTTCATGTTAAAGAGGTTCCTTTTGTT CGTTCATCCCTTAATCACGAGGACATATTCATTTTGGATACCGCGAACAAAATTTTCCAGTTCAATGGCTCTAACTCATG CATTCAAGAGAGAGCAAAAGCTCTTGAAGTTGTGCAATATATCAAAGATACTTTCCATGAGGGCAAGTGCGAAGTTGCAG CTGTTGAGGATGGAAAGTTGATGGCCGATACTGAAGCTGGTGAATTTTGGGGTTTGTTTGGTGGTTTTGCTCCTCTCCCA AAGAAGACATCTTCAGAGGACAATGGGGATGATAAGGAAACTGTGACCAAATTGCTATGTTTTAACCAAGGAACGCTGGA GCATATTAGTTTTGAATCTTTGGAGCATGAGTTACTTGAGACAAACAAATGCTACTTGTTGGACTGTGGAGCTGAAATGT ATGTTTGGATGGGCAGAGGTACTTCTTTGCAAGTGAGAAAGGGTGCAAGTGAAGCTGCTGAGAAATTGCTCATTGATGAG AACCGAAAAGGATCAAATGTTATCAAAGTGATTGAGGGATTCGAAACAATCATGTTCAAGTCAAAATTTAACAAGTGGCC GCCTACTCCTGATTTGAAGCTGTCATCTGAGGATGGCCGAGGCAAAGTGGCAGCTCTACTCAGAAGTCAAGGATTGGATG TTAAAGGATTGATGAAGGCTGCTCCTGAAGAAGAAGAACCCCAACCTTATATTGATTGCACTGGTCATTTACAGGTCTGG CGAGTAAATGGCGATGGCAAGACTCTTCTTTCATCTTCTGATCAATCAAAACTTTACACCGGAGATTGCTACATTTTTCA ATACACATACACTGGAGATGATAAGGAGGAATGTCTTATTGGAACTTGGTTTGGGAAGAAGAGTGTTGAGGAGGACAGAA CATCGGCAATTTCACTAGCTAGCAAGATGTTTCAGGCTGCAAAATTCCAGGCTGCCCAGGCTCGCCTCTATGAAGGGAAA GAACCGATTCAATTTTTCGTCATATTTCAGAGTCTTCAAGTTTTTAAGGGTGGACTTAGCTCTGGATACAAGAACTTTAT TGCTGTAAATGGTACCGATGACGACACTTACGTTGAAGGTGGGCTTGCTCTCTTCCGGATTCAAGGCTCAGGATCAGAAA ACATGCAAGCAATTCAAGTTGATGCAGTGTCTTCGTCATTAAATTCATCCTACTGCTACATTCTACACAATGGAAACACT GTGTTCACATGGACTGGGAACCTTACAACCTCACTGGATAATGACTTGGTTGAGAGACAGCTAGATGTAATTAAGCCAGA TCTGCCATCCAGGTCACAAAAGGAGGGGAGAGAAACCGACCAATTCTGGGAACTCTTAGGTGGAAAATGCAAGTATTCAA ACAAAAAAATAGGAAAAGAAAATGAAAGCGACCCTCATCTTTTCTCATGTATCTTATCCAAGGAAAATCTAAAGGTCAAG GAAATACACCACTTTACTCAGGATGACCTGATGGCAGAAGATATTTTCGTTCTAGACTGCCGCACCGACTTGTTTGTTTG GGTTGGACAGGAGGTGGATGCCAAATTGAGATCACAAGCGATGGACATCGGTGAGAAATTTCTTCTACATGATTTCCTTA TGGAAAATCTCTCGCAAGACACACCAATTTTTATTGTTACAGAAGGAAGTGAGCCACAGTTTTTTACTAGGTTCTTCACT TGGGACTCAGCAAAATCGCTGATGCATGGCAGTTCATACCAGAGGAAGCTTGCAATAGTAAAGGGTGGAGCAACTCCATC GCTTGATAAACCTAAAAGGCGAACACCAGCGTTTTCAGGAAGGAACGCAGGACAAGATAAATCTCAGCAGCGCACAAGAA GTATGTCCCACAGCCCAGAACGTCACCGTATTCGAGGAAGATCTCCAGCTTTCACCGCAATAGCTTCTGCCTTTGAGAAC CCAAGTACCCGGTATCTTTCCACCCCTCCCCCTGCTGTCAAGAAGCTTTTCCCAAGATCCGGAGGGTCTGAATTGCCAAA GACATCATCCAAACAATCAGCTATCAATGCTCTCACCAGTGCTTTCGAGGGTCCTACGAAAAGTACAATACCTAAGTCTG TAAAAGCGAGCCCCGAGGCAGAGAAGGCAATACAGGAGGAAGGCTCAACGATCGGTGAAAGTGAAAACGAGCCAGAAGAT GATGAGAACAGCACAATCTACCCATATGAACGTTTGACCACCACATCTGATGATCCTGCTCCTGACATTGATGTTACCAA GCGAGAGGTCTACTTATCATCAGTTGAGTTCACAGAGAAGTTTGGCATGACAAGGGCATCATTCAAAAACCTTCCAAAAT GGAAGCAAAACAGGCTAAAGTCTGATCTCCAGCTCTTTTAG |