
Microexon ID | Os_3:13784818-13784828:+ |
Species | Oryza sativa | Coordinates | 3:13784818..13784828 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Os_3:13784818-13784828:+ does not have available information here.
Transcript ID | Os03t0356700-01 |
Protein ID | Os03t0356700-01 |
Gene ID | Os03g0356700 |
Gene Name | VLN2 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os03t0356700-01 MSSAKPVLDPAFQGVGQKPGTEIWRIQDFKPVPLPKADYGKFYNGDSYIVLQTTCSKGGGAYLFDIHFWIGKDSSQDEAG TAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKTPEEDKFETRLYICKGKRAIRVKEVPFAR SSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAIQHLKETYHNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGK KAICDDDVVLETTAPKLYSINNGQLKLEDTVLTKSILENNKCFLVDCGSDLFIWVGRLTQVEERKAASAAVEEFIATQNR PKTTRVTRVIQGYENHTFKSKFESWPVNSAGSAGAEEGRGKVAALLKQQGVDIKGASKSSAPVDEEVPPLLEGDGKLEVY CVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQG KEPPQFIALFQPMVILKGGISSGYQKFVEEKGLKDETYSGDGIALFRISGTSIHNNKVLQVDAVSSNLSPTDCFVLQSGN SMFTWIGNASSYEQQQWAAKVAEFLKPGVAVKHCKEGTESSAFWFALGGKQNYTSRNATHDVVREPHLYTFSLRNGKLEV TEIFNFSQDDLLTEDMMVLDTHGEVFVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYKVVEGNEPCFFRTYF SWDNTRSVIHGNSFQKKLSLLFGMRSESGSKSSGDGGPTQRASALAALSSAFNPSSQKNKGNDRPKSSDGGPTQRASAMA ALTSAFNPSAKPKSPPQRAGQGSQRAAAVAALSNVLTAEGSSQSPRIGDADTAELTPSAASPLSEGASEFSADKDAPGDG ALSEGGRTEPDVSVEQTANENGGETTFSYDRLISKSTNPVRGIDYKRRETYLSDSEFQTVFGITKEEFYQQPGWKQELQK RKHDLF* |
CDS seq | >Os03t0356700-01 ATGTCAAGTGCAAAACCAGTGCTTGATCCTGCATTTCAAGGAGTTGGCCAAAAACCTGGCACAGAAATATGGAGGATTCA AGATTTTAAGCCAGTTCCTTTGCCAAAAGCAGATTACGGTAAATTTTACAATGGAGATTCATATATAGTTCTCCAGACGA CTTGCAGCAAAGGTGGTGGCGCCTATCTTTTTGACATCCACTTTTGGATTGGGAAAGATTCTAGTCAAGATGAAGCTGGG ACTGCAGCAATTAAGACAGTTGAACTTGACACCATGCTCGGAGGTCGTGCAGTGCAGCACAGAGAACTTCAAGGCTATGA ATCTGATAAGTTCCTATCGTACTTTAAACCATGCATTATACCCTTGGAGGGAGGTTTCGCCTCTGGGTTTAAAACACCTG AAGAGGATAAGTTTGAAACAAGGCTATATATTTGCAAAGGGAAGAGAGCTATCAGAGTTAAAGAGGTTCCATTTGCTCGC TCGTCATTGAATCATGATGATGTATTTATCTTGGATACGGAAAAGAAAATATATCAATTCAATGGTGCAAACTCCAATAT TCAAGAGAGAGCGAAAGCTTTGGAAGCGATTCAACATTTAAAGGAGACATACCACAATGGAGTGTGTGATGTTGCGATTG TTGATGATGGAAAATTGCAAGCAGAATCAGATTCTGGTGAATTCTGGGTTCTTTTTGGAGGTTTTGCACCAATAGGGAAG AAAGCTATATGTGACGATGATGTTGTTCTTGAAACCACAGCCCCCAAGCTTTACAGCATCAATAATGGTCAATTAAAGTT AGAAGACACAGTTCTGACAAAATCAATTCTTGAGAACAATAAGTGCTTTTTGGTCGACTGTGGGTCTGATTTATTTATAT GGGTTGGTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAGGAATTCATTGCTACTCAAAATAGG CCAAAGACAACAAGAGTAACCCGAGTGATTCAAGGGTACGAGAATCATACATTCAAGTCTAAGTTTGAATCATGGCCAGT AAATAGTGCAGGAAGTGCTGGCGCGGAGGAAGGCCGAGGGAAAGTTGCAGCTCTGTTGAAGCAACAAGGAGTTGATATCA AGGGAGCCTCAAAAAGCAGCGCTCCAGTAGACGAGGAAGTTCCTCCTTTGCTAGAAGGCGATGGAAAACTTGAGGTTTAT TGTGTCAATGGCAGTGCTAAGACTGCTCTTCCAAAGGAGGAGCTTGGAAAGTTTTACAGCGGAGATTGCTATATTGTTCT CTATACATATCATTCTGGTGACAAGAGAGAAGAATTTTATTTGACTTATTGGATTGGCAAGGACAGCATACCGGAAGATC AAGAGATGGCTTTCCAAACAGCTAATTCAATTTGGAATTCACTGAAAGGAAGGCCTATTCTGGGTCGTATTTATCAAGGG AAAGAACCACCACAATTTATTGCCCTTTTCCAGCCCATGGTCATTCTAAAGGGTGGAATCAGCTCTGGATACCAGAAATT TGTAGAAGAAAAGGGCTTGAAGGATGAAACATATTCTGGCGATGGCATTGCTCTTTTTCGAATTTCTGGAACATCAATTC ACAACAATAAAGTGCTTCAAGTTGATGCGGTGTCATCAAACTTGAGTCCCACGGATTGTTTTGTCCTGCAATCTGGAAAT TCAATGTTTACATGGATTGGCAATGCCAGTTCGTATGAACAGCAACAATGGGCTGCAAAAGTTGCTGAATTCTTGAAGCC TGGTGTTGCTGTCAAACATTGCAAGGAGGGAACTGAGAGCTCTGCCTTTTGGTTTGCTCTTGGTGGAAAGCAGAATTACA CAAGCAGAAATGCCACACATGATGTTGTTAGAGAGCCTCACTTGTATACATTCTCATTGAGGAATGGGAAACTGGAGGTC ACTGAAATTTTCAACTTTTCACAAGATGATTTGCTGACTGAAGACATGATGGTTCTTGATACACATGGGGAAGTCTTTGT TTGGATGGGTCAGTGTGTGGATGCTAAAGAGAAGCAGAAGGCATTTGAAATTGGCCAGAAATATGCAGAACATGCGGCGG CCTTCGAATCTCTTTCTCCTGATGTGCCTCTGTACAAAGTCGTTGAAGGGAATGAACCATGCTTCTTCAGAACTTACTTC TCCTGGGATAACACAAGATCTGTGATTCATGGAAATTCATTTCAGAAGAAGCTTTCACTTCTTTTCGGAATGCGCTCAGA GAGTGGATCTAAGAGTTCAGGTGATGGTGGACCAACTCAGAGGGCATCAGCATTGGCTGCTCTTTCATCTGCATTCAACC CATCTTCCCAAAAGAATAAGGGTAATGATAGGCCTAAAAGCTCTGATGGTGGACCCACTCAGCGCGCTTCAGCAATGGCT GCCTTAACATCAGCGTTCAATCCATCAGCAAAACCCAAAAGCCCACCACAACGTGCAGGTCAAGGTTCTCAGCGAGCAGC TGCTGTTGCTGCGCTGTCTAATGTTTTGACTGCTGAGGGTTCATCTCAAAGCCCACGCATAGGTGATGCAGATACAGCTG AACTAACTCCGTCTGCTGCATCCCCTCTGTCTGAAGGAGCATCAGAATTTTCCGCTGATAAAGATGCCCCAGGAGATGGG GCATTATCTGAGGGAGGGCGAACTGAGCCTGACGTATCAGTGGAACAGACTGCTAATGAAAATGGAGGTGAAACAACCTT CAGCTATGATCGGCTGATATCAAAATCTACCAACCCTGTTCGTGGGATAGATTACAAACGCAGAGAGACATATTTGTCGG ACAGCGAATTCCAGACTGTATTTGGTATAACGAAGGAAGAGTTCTACCAGCAGCCAGGGTGGAAACAAGAACTACAGAAA AGGAAGCATGATCTTTTCTGA |
Microexon DNA seq | GGAAACTGGAG |
Microexon Amino Acid seq | GKLE |
Microexon-tag DNA Seq | CATGATGTTGTTAGAGAGCCTCACTTGTATACATTCTCATTGAGGAATGGGAAACTGGAGGTCACTGAAATTTTCAACTTTTCACAAGATGATTTGCTGACTGAAGAC |
Microexon-tag Amino Acid seq | HDVVREPHLYTFSLRNGKLEVTEIFNFSQDDLLTED |
Transcript ID | Os.18681.1 |
Gene ID | Os.18681 |
Gene Name | VLN2 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Os.18681.1 MSSAKPVLDPAFQGVGQKPGTEIWRIQDFKPVPLPKADYGKFYNGDSYIVLQTTCSKGGGAYLFDIHFWIGKDSSQDEAG TAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEGGFASGFKTPEEDKFETRLYICKGKRAIRVKEVPFAR SSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAIQHLKETYHNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGK KAICDDDVVLETTAPKLYSINNGQLKLEDTVLTKSILENNKCFLVDCGSDLFIWVGRLTQVEERKAASAAVEEFIATQNR PKTTRVTRVIQGYENHTFKSKFESWPVNSAGSAGAEEGRGKVAALLKQQGVDIKGASKSSAPVDEEVPPLLEGDGKLEVY CVNGSAKTALPKEELGKFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQG KEPPQFIALFQPMVILKGGISSGYQKFVEEKGLKDETYSGDGIALFRISGTSIHNNKVLQVDAVSSNLSPTDCFVLQSGN SMFTWIGNASSYEQQQWAAKVAEFLKPGVAVKHCKEGTESSAFWFALGGKQNYTSRNATHDVVREPHLYTFSLRNGKLEV TEIFNFSQDDLLTEDMMVLDTHGEVFVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYKVVEGNEPCFFRTYF SWDNTRSVIHGNSFQKKLSLLFGMRSESGSKSSGDGGPTQRASALAALSSAFNPSSQKNKGNDRPKSSDGGPTQRASAMA ALTSAFNPSAKPKSPPQRAGQGSQRAAAVAALSNVLTAEGSSQSPRIGRSSPMAGDADTAELTPSAASPLSEGASEFSAD KDAPGDGALSEGGRTEPDVSVEQTANENGGETTFSYDRLISKSTNPVRGIDYKRRETYLSDSEFQTVFGITKEEFYQQPG WKQELQKRKHDLF* |
CDS seq | >Os.18681.1 ATGTCAAGTGCAAAACCAGTGCTTGATCCTGCATTTCAAGGAGTTGGCCAAAAACCTGGCACAGAAATATGGAGGATTCA AGATTTTAAGCCAGTTCCTTTGCCAAAAGCAGATTACGGTAAATTTTACAATGGAGATTCATATATAGTTCTCCAGACGA CTTGCAGCAAAGGTGGTGGCGCCTATCTTTTTGACATCCACTTTTGGATTGGGAAAGATTCTAGTCAAGATGAAGCTGGG ACTGCAGCAATTAAGACAGTTGAACTTGACACCATGCTCGGAGGTCGTGCAGTGCAGCACAGAGAACTTCAAGGCTATGA ATCTGATAAGTTCCTATCGTACTTTAAACCATGCATTATACCCTTGGAGGGAGGTTTCGCCTCTGGGTTTAAAACACCTG AAGAGGATAAGTTTGAAACAAGGCTATATATTTGCAAAGGGAAGAGAGCTATCAGAGTTAAAGAGGTTCCATTTGCTCGC TCGTCATTGAATCATGATGATGTATTTATCTTGGATACGGAAAAGAAAATATATCAATTCAATGGTGCAAACTCCAATAT TCAAGAGAGAGCGAAAGCTTTGGAAGCGATTCAACATTTAAAGGAGACATACCACAATGGAGTGTGTGATGTTGCGATTG TTGATGATGGAAAATTGCAAGCAGAATCAGATTCTGGTGAATTCTGGGTTCTTTTTGGAGGTTTTGCACCAATAGGGAAG AAAGCTATATGTGACGATGATGTTGTTCTTGAAACCACAGCCCCCAAGCTTTACAGCATCAATAATGGTCAATTAAAGTT AGAAGACACAGTTCTGACAAAATCAATTCTTGAGAACAATAAGTGCTTTTTGGTCGACTGTGGGTCTGATTTATTTATAT GGGTTGGTCGACTAACACAAGTGGAGGAGAGAAAAGCTGCAAGTGCAGCAGTTGAGGAATTCATTGCTACTCAAAATAGG CCAAAGACAACAAGAGTAACCCGAGTGATTCAAGGGTACGAGAATCATACATTCAAGTCTAAGTTTGAATCATGGCCAGT AAATAGTGCAGGAAGTGCTGGCGCGGAGGAAGGCCGAGGGAAAGTTGCAGCTCTGTTGAAGCAACAAGGAGTTGATATCA AGGGAGCCTCAAAAAGCAGCGCTCCAGTAGACGAGGAAGTTCCTCCTTTGCTAGAAGGCGATGGAAAACTTGAGGTTTAT TGTGTCAATGGCAGTGCTAAGACTGCTCTTCCAAAGGAGGAGCTTGGAAAGTTTTACAGCGGAGATTGCTATATTGTTCT CTATACATATCATTCTGGTGACAAGAGAGAAGAATTTTATTTGACTTATTGGATTGGCAAGGACAGCATACCGGAAGATC AAGAGATGGCTTTCCAAACAGCTAATTCAATTTGGAATTCACTGAAAGGAAGGCCTATTCTGGGTCGTATTTATCAAGGG AAAGAACCACCACAATTTATTGCCCTTTTCCAGCCCATGGTCATTCTAAAGGGTGGAATCAGCTCTGGATACCAGAAATT TGTAGAAGAAAAGGGCTTGAAGGATGAAACATATTCTGGCGATGGCATTGCTCTTTTTCGAATTTCTGGAACATCAATTC ACAACAATAAAGTGCTTCAAGTTGATGCGGTGTCATCAAACTTGAGTCCCACGGATTGTTTTGTCCTGCAATCTGGAAAT TCAATGTTTACATGGATTGGCAATGCCAGTTCGTATGAACAGCAACAATGGGCTGCAAAAGTTGCTGAATTCTTGAAGCC TGGTGTTGCTGTCAAACATTGCAAGGAGGGAACTGAGAGCTCTGCCTTTTGGTTTGCTCTTGGTGGAAAGCAGAATTACA CAAGCAGAAATGCCACACATGATGTTGTTAGAGAGCCTCACTTGTATACATTCTCATTGAGGAATGGGAAACTGGAGGTC ACTGAAATTTTCAACTTTTCACAAGATGATTTGCTGACTGAAGACATGATGGTTCTTGATACACATGGGGAAGTCTTTGT TTGGATGGGTCAGTGTGTGGATGCTAAAGAGAAGCAGAAGGCATTTGAAATTGGCCAGAAATATGCAGAACATGCGGCGG CCTTCGAATCTCTTTCTCCTGATGTGCCTCTGTACAAAGTCGTTGAAGGGAATGAACCATGCTTCTTCAGAACTTACTTC TCCTGGGATAACACAAGATCTGTGATTCATGGAAATTCATTTCAGAAGAAGCTTTCACTTCTTTTCGGAATGCGCTCAGA GAGTGGATCTAAGAGTTCAGGTGATGGTGGACCAACTCAGAGGGCATCAGCATTGGCTGCTCTTTCATCTGCATTCAACC CATCTTCCCAAAAGAATAAGGGTAATGATAGGCCTAAAAGCTCTGATGGTGGACCCACTCAGCGCGCTTCAGCAATGGCT GCCTTAACATCAGCGTTCAATCCATCAGCAAAACCCAAAAGCCCACCACAACGTGCAGGTCAAGGTTCTCAGCGAGCAGC TGCTGTTGCTGCGCTGTCTAATGTTTTGACTGCTGAGGGTTCATCTCAAAGCCCACGCATAGGTAGGTCTTCCCCAATGG CAGGTGATGCAGATACAGCTGAACTAACTCCGTCTGCTGCATCCCCTCTGTCTGAAGGAGCATCAGAATTTTCCGCTGAT AAAGATGCCCCAGGAGATGGGGCATTATCTGAGGGAGGGCGAACTGAGCCTGACGTATCAGTGGAACAGACTGCTAATGA AAATGGAGGTGAAACAACCTTCAGCTATGATCGGCTGATATCAAAATCTACCAACCCTGTTCGTGGGATAGATTACAAAC GCAGAGAGACATATTTGTCGGACAGCGAATTCCAGACTGTATTTGGTATAACGAAGGAAGAGTTCTACCAGCAGCCAGGG TGGAAACAAGAACTACAGAAAAGGAAGCATGATCTTTTCTGA |