
Microexon ID | Hv_7H:604136910-604136920:+ |
Species | Hordeum Vulgare | Coordinates | 7H:604136910..604136920 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCGTGCTTAAG |
Microexon Amino Acid seq | GVLK |
Microexon-tag DNA Seq | AGAGATCAAGAAAGTGACTCTCATTTGTTCTCTTGTACCTTTTCAAAAGGCGTGCTTAAGGCTAGAGAGATATTCAATTTTACGCAAGATGATATGATGACAGAGGAC |
Microexon-tag Amino Acid Seq | RDQESDSHLFSCTFSKGVLKAREIFNFTQDDMMTED |
Microexon-tag spanning region | 604136730-604137052 |
Microexon-tag prediction score | 0.9317 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0740110.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0740110.1 |
Gene ID | HORVU.MOREX.r3.7HG0740110 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0740110.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0740110 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >HORVU.MOREX.r3.7HG0740110.1 MVISMREVDPVFKGAGQKDGLEIWRIEKLQAVPVPRESHGKFSTGDSYVILKTSALKNGSFRQEIHYWLGKDTSQDEAGI AAIKAVELDAALGGLAVQYRELQGNETEKFLSYFKPCIIPEEGQAASGFSQAVVNEQEHVVRLFVSKGKHTVHVKEVPFA RSSLNHDNILILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDANHEGKCDVAVVDDGKLMADADAGEFWGLFGGFAPLP KTTCSELNEEDTSFPSLLLCVNEGQTFPMDCENLTRALLDSTKCYLLDCGSELYVWMGRETVLEARKRAGLAAEELLREG NRPRSHIIRLMEGFETVVFRSKFNKWPKKVETVVSDESRGKIAALLKRQGFNVRGVPKAAPLKEESQAHIDCTGHLQVWR VDDREKTSLSFYEQCKFYSGDCYIFQYSYRSDDGENYLIGTWFGQKSIEEDRSAASCHAHTMVDSLKFQAVLVRLYEGKE TMEFFTIFQNLVIFKGGASTGYKKYVSENGTEDDTYSDNGVALFRVQGSGPENMQAIQVDTAAASLNSSYCYILHDRDTL FTWVGNLSSSMDHGLAERQLDVLKPNLQSRLLKEGSESHQFWKLLGSKCEYPREKIVRDQESDSHLFSCTFSKGVLKARE IFNFTQDDMMTEDIYILDCHSCVFIWVGQHVDTNIRAHALSIGENFLELDILMENLSKETPLYVITEGSEPQFFTRFFFT WDSAKSAMHGNSFERRLSIVKNGVKQIRDKPKRRPTTSSHTGRCIVPDKSQRKTTSSSPDRARVRGRSPSFTALAANFEN PNARNLSTPPVATKPSPRTTPRTSPEPVKPPQRADSIAAISALFEQPRPNLIPKSRKARPAVKKHQPEASKPEANAKENT PAAEDGKTVAPAKLEDAKEGQPEDVEGLPEYPYDRLRTSSTDPVTDIDQGRREVYLSSAEFREKFGMTMEAFAKLPKWKQ TRLKITLQLF* |
CDS seq | >HORVU.MOREX.r3.7HG0740110.1 ATGGTGATCTCAATGAGGGAGGTGGATCCTGTCTTCAAAGGAGCAGGACAAAAGGATGGACTGGAGATATGGCGAATCGA AAAGTTGCAGGCTGTTCCTGTTCCCAGGGAATCACATGGTAAATTCTCAACAGGAGATTCTTACGTAATATTAAAGACGT CCGCCCTCAAAAATGGTTCTTTTCGTCAAGAGATTCATTATTGGCTTGGGAAAGATACCAGTCAGGATGAAGCTGGTATA GCTGCGATCAAGGCTGTGGAACTGGATGCTGCTCTTGGTGGACTTGCTGTACAATACCGTGAACTGCAAGGAAACGAGAC TGAAAAATTTCTTTCATACTTTAAACCTTGCATCATACCAGAGGAAGGTCAAGCTGCATCTGGTTTTAGTCAGGCTGTAG TCAATGAGCAGGAGCATGTCGTACGATTATTTGTCAGCAAAGGAAAACACACGGTCCATGTCAAAGAGGTTCCTTTTGCA CGGTCATCACTGAACCATGACAACATACTTATTCTGGATACTAAGTCAAAGATATTCCAATTTAATGGATCAAATTCGAG TATTCAAGAGAGGGCTAAAGCCCTTGAGGTCGTGCAATACCTCAAAGACGCCAACCATGAAGGAAAGTGTGATGTGGCTG TGGTTGATGATGGAAAGTTGATGGCAGACGCTGATGCTGGTGAGTTTTGGGGTCTCTTTGGTGGATTTGCTCCTCTGCCA AAAACGACATGTTCTGAGCTCAATGAAGAAGATACTTCTTTCCCTTCATTACTTCTCTGTGTAAATGAGGGCCAAACATT TCCCATGGATTGTGAAAATCTAACAAGAGCGCTGCTAGATTCAACAAAGTGCTACCTTCTGGACTGTGGATCTGAACTTT ATGTCTGGATGGGTAGAGAAACAGTACTTGAAGCTAGGAAACGAGCAGGATTAGCCGCTGAGGAATTACTGCGTGAAGGA AATCGACCAAGATCTCACATTATTCGTCTCATGGAAGGATTCGAGACGGTTGTATTCCGGTCAAAGTTCAATAAATGGCC CAAGAAAGTTGAGACGGTTGTGTCAGATGAAAGCAGAGGAAAAATTGCAGCCCTTCTGAAGCGCCAAGGATTTAATGTAA GGGGTGTGCCAAAAGCTGCTCCTTTGAAGGAAGAGTCTCAAGCACACATTGACTGCACAGGACACTTACAGGTTTGGCGT GTAGATGACCGTGAAAAGACTTCCCTTTCATTCTATGAACAATGCAAGTTCTACAGTGGTGATTGCTATATCTTCCAATA TAGCTACCGTAGTGATGATGGGGAGAATTATCTTATCGGTACTTGGTTTGGCCAGAAGAGTATTGAGGAGGACAGGAGTG CAGCCTCTTGCCATGCTCATACGATGGTCGATTCACTAAAATTCCAGGCAGTTCTGGTCCGCCTTTATGAAGGAAAGGAG ACCATGGAGTTCTTTACTATATTTCAGAACTTGGTTATATTTAAGGGTGGTGCTAGCACTGGATACAAAAAATATGTATC AGAAAATGGCACTGAGGATGATACATATTCGGACAACGGGGTTGCACTTTTCCGGGTTCAAGGTTCAGGACCGGAAAACA TGCAAGCGATTCAAGTTGACACGGCAGCAGCATCGCTGAACTCTTCCTATTGTTACATACTACACGATAGAGACACGCTC TTTACTTGGGTTGGGAACCTAAGCTCCTCAATGGACCACGGGCTTGCTGAGAGGCAGCTAGATGTGCTCAAGCCAAATCT CCAGTCAAGATTGCTCAAGGAAGGATCAGAATCTCATCAATTCTGGAAGTTACTTGGAAGCAAGTGTGAGTACCCAAGAG AGAAGATTGTGAGAGATCAAGAAAGTGACTCTCATTTGTTCTCTTGTACCTTTTCAAAAGGCGTGCTTAAGGCTAGAGAG ATATTCAATTTTACGCAAGATGATATGATGACAGAGGACATATATATTTTGGACTGTCATTCATGTGTCTTTATATGGGT TGGACAACATGTGGACACGAATATCCGAGCACACGCTTTGAGCATTGGAGAGAATTTTCTTGAACTTGATATTCTAATGG AAAACTTGTCAAAAGAAACACCACTTTATGTTATTACTGAAGGAAGCGAGCCCCAATTTTTCACAAGGTTCTTCTTCACT TGGGACTCTGCAAAATCAGCTATGCATGGTAACTCATTTGAAAGGAGGCTGTCTATAGTGAAGAATGGAGTAAAACAAAT AAGAGATAAACCTAAAAGAAGACCGACAACATCATCACACACTGGAAGATGCATTGTACCTGATAAATCTCAGAGGAAAA CTACGTCTTCCAGTCCTGACCGTGCAAGAGTTAGAGGAAGATCACCATCATTCACTGCATTGGCTGCCAACTTTGAGAAC CCAAATGCCCGAAATCTGTCAACTCCACCTGTCGCTACAAAGCCGTCTCCAAGGACGACTCCAAGGACATCCCCTGAACC TGTGAAGCCACCCCAAAGGGCTGATTCAATCGCTGCAATCTCTGCTTTGTTTGAGCAGCCGAGACCAAATCTGATACCGA AGTCAAGGAAAGCTCGTCCTGCTGTAAAGAAGCACCAACCTGAAGCAAGCAAACCAGAGGCAAATGCCAAGGAGAACACC CCTGCTGCGGAGGATGGGAAGACTGTAGCTCCAGCGAAACTGGAAGATGCGAAGGAGGGTCAGCCGGAAGACGTGGAAGG GCTTCCCGAGTACCCGTATGATCGCCTGAGGACATCTTCCACCGATCCTGTCACAGATATTGATCAAGGCAGGCGTGAGG TGTACCTGTCTTCGGCGGAGTTCAGGGAGAAATTCGGGATGACAATGGAGGCTTTTGCCAAGCTTCCAAAGTGGAAGCAG ACTAGGCTCAAGATCACACTCCAGCTGTTCTAA |
Hv_7H:604136910-604136920:+ does not have available information here.