
Microexon ID | Hv_3H:598144458-598144468:- |
Species | Hordeum Vulgare | Coordinates | 3H:598144458..598144468 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAGACTGGAG |
Microexon Amino Acid seq | GRLE |
Microexon-tag DNA Seq | GATACTATTGTCAGAGATCCTCATTTGTATGCCTTCTCAATTAGGAAAGGAAGACTGGAGGTTACCGAGATCTTCAATTTTTGCCAAGATGATTTGTTGACTGAAGAC |
Microexon-tag Amino Acid Seq | DTIVRDPHLYAFSIRKGRLEVTEIFNFCQDDLLTED |
Microexon-tag spanning region | 598144328-598144659 |
Microexon-tag prediction score | 0.9538 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.3HG0320950.1x |
Reference Transcript ID | HORVU.MOREX.r3.3HG0320950.1 |
Gene ID | HORVU.MOREX.r3.3HG0320950 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.3HG0320950.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.3HG0320950 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >HORVU.MOREX.r3.3HG0320950.1 MSTPKVVDPAFQGAGQKVGIEIWRIEDFKPVALPKSDYGKFYSGDSYIVLQTTSPKGGAYLYDVHFWIGKDSSQDEAGTA AIKTVELDSVLGGRAVQYRELQGYESDKFLSYFKPCIIPMEGGFASGFKTPEEETFETRLYICKGKRAIRIKQVPFARSS LNHDDVFILDTEKKIYQFNGANSNIQERAKSLEVIQHLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT VSDDDVVLETTAPKLYSINGGELKFEDIPLTKAVLENTRCFLLDCGAEMFVWVGRVTQLEDRKAATKAIEEFIINQKRPK TTRVTQVIQGYESHSFKSKFESWPAGTTTGNSGAEDGRGKVAALLKQQGVDVKGAPKSSTPVNEEVPPLLEGGGRLEVWC IDGNAKSPLPKEDNGKFYSGDCYIVLYTYHSGDKKEEYYLNYWIGKESTADDQVMGAELANTMWNSLKGRPVLGRIYQGK EPPQFVALFQPMVILKGGIGSGYKKITEEKGATSGTYSPEGIALFRVSGTAIHNNKTLHVDALATSLSSTDCFVLQSGSA MFTWHGNSSTYEQQQWAAKVAEFLKPGATVKHCKEGTESSAFWFALDGKQSYTSKPIMQDTIVRDPHLYAFSIRKGRLEV TEIFNFCQDDLLTEDLMILDTHGEVFIWIGQCVEPKEKQKAFDIGQKYIEHAMSIEDLSPYVPLYKVSEGNEPCFFKTYF SWDSTKSVIHGNSFQKKLSLLFGLRSEGASRSSGNGGPTQRASALAALSSAFNPSSQQKQVNDSRPPSSGDGPTQRASAL AALSNAAFNPSPQQKQVNDSRPPSSGDGPTQRASALAALSNAFNPSSKPKTPPPSRSGQGSQRAAAVAALSSVLTAEQSG SSDNLRASKTSTTSEKTDAEVVVISPSEASPRSEAGESSEFQSEKDAPVDEVPSQVDVAEPEALEVPEEQTTEHVGEATF SYDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF* |
CDS seq | >HORVU.MOREX.r3.3HG0320950.1 ATGTCGACCCCGAAAGTGGTGGATCCTGCTTTCCAAGGGGCTGGCCAAAAAGTTGGGATAGAAATATGGCGCATTGAAGA TTTTAAGCCAGTTGCATTGCCAAAATCTGATTATGGTAAATTCTATTCTGGAGATTCATATATAGTTTTGCAGACGACTT CTCCTAAGGGTGGTGCATATCTGTACGACGTCCACTTCTGGATTGGGAAAGACTCAAGCCAAGATGAAGCTGGCACTGCA GCAATCAAGACGGTTGAACTTGATTCTGTACTTGGGGGTCGTGCAGTCCAGTATAGGGAACTCCAAGGTTATGAATCTGA CAAGTTCCTGTCATACTTCAAACCTTGCATTATACCTATGGAGGGTGGTTTCGCCTCTGGGTTCAAGACGCCAGAAGAGG AGACCTTTGAAACACGGTTATATATTTGCAAAGGGAAGAGAGCTATTAGAATTAAGCAGGTTCCCTTTGCACGGTCATCA TTAAACCATGATGATGTGTTTATCTTAGATACTGAAAAGAAAATTTATCAATTCAATGGTGCAAACTCCAATATCCAAGA AAGGGCTAAATCACTGGAAGTGATCCAACATTTAAAGGAGAAGTACCATGGGGGCGTGTGTGATGTTGCAATCGTTGATG ATGGGAAACTACAAGCGGAATCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCTATTGGGAAAAAAACT GTTAGTGATGACGATGTTGTACTGGAAACTACAGCACCCAAGCTGTACAGTATCAACGGCGGTGAACTAAAGTTTGAAGA TATACCTCTTACAAAAGCAGTCCTTGAGAACACAAGATGTTTCTTACTTGACTGTGGGGCTGAAATGTTTGTATGGGTTG GTCGGGTAACACAACTCGAGGACAGAAAAGCTGCCACTAAAGCCATTGAGGAATTCATCATTAATCAGAAAAGGCCAAAG ACGACAAGAGTGACACAAGTGATTCAGGGTTATGAAAGCCACTCATTCAAGTCAAAATTTGAATCATGGCCGGCGGGTAC TACAACAGGGAACTCAGGTGCAGAGGATGGGCGGGGAAAAGTTGCAGCTTTATTGAAGCAACAAGGTGTTGATGTAAAAG GAGCTCCAAAAAGCAGTACTCCAGTAAACGAGGAAGTTCCTCCTTTGCTTGAAGGTGGTGGAAGACTCGAGGTGTGGTGC ATTGATGGAAATGCCAAGAGTCCACTTCCAAAAGAGGACAATGGAAAATTTTACAGTGGAGACTGTTATATTGTTCTTTA TACATATCATTCGGGTGACAAGAAAGAAGAATATTATCTCAATTACTGGATTGGGAAGGAAAGCACAGCGGATGATCAAG TGATGGGAGCTGAACTAGCCAATACAATGTGGAATTCACTGAAAGGAAGGCCTGTTCTGGGTCGTATTTATCAAGGGAAG GAACCACCGCAATTTGTTGCCCTTTTCCAGCCCATGGTTATCTTGAAGGGTGGTATCGGTTCTGGATACAAGAAGATTAC AGAGGAAAAGGGTGCAACCAGTGGAACTTACTCCCCCGAGGGCATAGCTCTGTTTCGGGTGTCTGGAACAGCTATCCATA ACAATAAAACGCTTCACGTTGACGCGCTAGCTACATCTTTAAGCTCCACAGACTGTTTTGTATTGCAATCTGGAAGTGCT ATGTTTACATGGCATGGCAATTCTAGCACTTACGAGCAACAGCAGTGGGCAGCGAAAGTTGCTGAGTTCTTGAAGCCTGG TGCGACAGTGAAACATTGCAAGGAGGGAACAGAGAGTTCTGCTTTCTGGTTTGCTCTTGATGGAAAACAGAGCTATACAA GCAAACCCATCATGCAGGATACTATTGTCAGAGATCCTCATTTGTATGCCTTCTCAATTAGGAAAGGAAGACTGGAGGTT ACCGAGATCTTCAATTTTTGCCAAGATGATTTGTTGACTGAAGACTTGATGATTCTTGACACACACGGGGAGGTCTTTAT TTGGATTGGTCAGTGCGTGGAACCAAAAGAGAAACAAAAGGCGTTCGACATTGGCCAGAAATATATAGAGCATGCGATGT CGATTGAAGATCTTTCCCCGTATGTACCACTTTACAAAGTTTCTGAAGGGAATGAGCCATGCTTCTTCAAGACATACTTC TCTTGGGATAGCACAAAATCTGTGATTCATGGGAATTCATTCCAAAAGAAACTTTCACTTCTTTTTGGATTACGCTCAGA GGGTGCATCTAGGAGCTCTGGTAATGGTGGACCCACACAAAGGGCATCTGCATTAGCCGCTCTATCATCTGCATTCAATC CATCTTCGCAGCAGAAGCAGGTTAATGATAGTAGGCCTCCAAGCTCTGGTGATGGGCCCACTCAACGTGCCTCTGCACTG GCTGCTTTGTCCAATGCAGCATTCAATCCATCTCCGCAGCAGAAGCAGGTTAATGATAGTAGGCCTCCAAGCTCGGGTGA TGGACCCACTCAACGCGCCTCTGCACTGGCTGCCTTGTCCAATGCGTTTAATCCATCCTCAAAACCAAAAACTCCACCTC CGTCACGTTCAGGTCAAGGGTCACAAAGAGCAGCTGCAGTTGCTGCGCTATCCTCTGTGCTGACTGCTGAGCAGTCTGGA TCATCTGACAATCTCAGAGCTAGCAAGACGAGCACAACATCAGAAAAGACTGATGCGGAGGTCGTCGTAATATCTCCATC AGAAGCATCTCCTCGCTCTGAAGCTGGAGAATCCTCTGAATTTCAGTCAGAGAAAGATGCTCCAGTGGATGAGGTGCCAT CCCAGGTAGATGTAGCAGAGCCTGAGGCGCTGGAGGTGCCAGAGGAACAAACAACTGAACATGTTGGTGAAGCAACATTT AGCTACGACCGCTTGATATCTAAATCTACTGATCCTATCCGTGGGATAGACTACAAACGCAGAGAGGCGTACTTATCGGA GAGCGAGTTCCAGACTGTCTTCGGCGTCACCAAGGACGTGTTCTACCTGCAGCCAGGGTGGAAGCAAGAGCTGCAGAAGC GGAAAGCCGATCTCTTTTGA |
Hv_3H:598144458-598144468:- does not have available information here.