Microexon ID Hv_3H:598144458-598144468:-
Species Hordeum   Vulgare
Coordinates 3H:598144458..598144468
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAGACTGGAG
Microexon Amino Acid seq GRLE
Microexon-tag DNA Seq GATACTATTGTCAGAGATCCTCATTTGTATGCCTTCTCAATTAGGAAAGGAAGACTGGAGGTTACCGAGATCTTCAATTTTTGCCAAGATGATTTGTTGACTGAAGAC
Microexon-tag Amino Acid Seq DTIVRDPHLYAFSIRKGRLEVTEIFNFCQDDLLTED
Microexon-tag spanning region598144328-598144659
Microexon-tag prediction score0.9538
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.3HG0320950.1x
Reference Transcript ID HORVU.MOREX.r3.3HG0320950.1
Gene ID HORVU.MOREX.r3.3HG0320950
Gene Name NA
Transcript ID HORVU.MOREX.r3.3HG0320950.1
Protein ID
Gene ID HORVU.MOREX.r3.3HG0320950
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >HORVU.MOREX.r3.3HG0320950.1
MSTPKVVDPAFQGAGQKVGIEIWRIEDFKPVALPKSDYGKFYSGDSYIVLQTTSPKGGAYLYDVHFWIGKDSSQDEAGTA
AIKTVELDSVLGGRAVQYRELQGYESDKFLSYFKPCIIPMEGGFASGFKTPEEETFETRLYICKGKRAIRIKQVPFARSS
LNHDDVFILDTEKKIYQFNGANSNIQERAKSLEVIQHLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKT
VSDDDVVLETTAPKLYSINGGELKFEDIPLTKAVLENTRCFLLDCGAEMFVWVGRVTQLEDRKAATKAIEEFIINQKRPK
TTRVTQVIQGYESHSFKSKFESWPAGTTTGNSGAEDGRGKVAALLKQQGVDVKGAPKSSTPVNEEVPPLLEGGGRLEVWC
IDGNAKSPLPKEDNGKFYSGDCYIVLYTYHSGDKKEEYYLNYWIGKESTADDQVMGAELANTMWNSLKGRPVLGRIYQGK
EPPQFVALFQPMVILKGGIGSGYKKITEEKGATSGTYSPEGIALFRVSGTAIHNNKTLHVDALATSLSSTDCFVLQSGSA
MFTWHGNSSTYEQQQWAAKVAEFLKPGATVKHCKEGTESSAFWFALDGKQSYTSKPIMQDTIVRDPHLYAFSIRKGRLEV
TEIFNFCQDDLLTEDLMILDTHGEVFIWIGQCVEPKEKQKAFDIGQKYIEHAMSIEDLSPYVPLYKVSEGNEPCFFKTYF
SWDSTKSVIHGNSFQKKLSLLFGLRSEGASRSSGNGGPTQRASALAALSSAFNPSSQQKQVNDSRPPSSGDGPTQRASAL
AALSNAAFNPSPQQKQVNDSRPPSSGDGPTQRASALAALSNAFNPSSKPKTPPPSRSGQGSQRAAAVAALSSVLTAEQSG
SSDNLRASKTSTTSEKTDAEVVVISPSEASPRSEAGESSEFQSEKDAPVDEVPSQVDVAEPEALEVPEEQTTEHVGEATF
SYDRLISKSTDPIRGIDYKRREAYLSESEFQTVFGVTKDVFYLQPGWKQELQKRKADLF*
CDS seq >HORVU.MOREX.r3.3HG0320950.1
ATGTCGACCCCGAAAGTGGTGGATCCTGCTTTCCAAGGGGCTGGCCAAAAAGTTGGGATAGAAATATGGCGCATTGAAGA
TTTTAAGCCAGTTGCATTGCCAAAATCTGATTATGGTAAATTCTATTCTGGAGATTCATATATAGTTTTGCAGACGACTT
CTCCTAAGGGTGGTGCATATCTGTACGACGTCCACTTCTGGATTGGGAAAGACTCAAGCCAAGATGAAGCTGGCACTGCA
GCAATCAAGACGGTTGAACTTGATTCTGTACTTGGGGGTCGTGCAGTCCAGTATAGGGAACTCCAAGGTTATGAATCTGA
CAAGTTCCTGTCATACTTCAAACCTTGCATTATACCTATGGAGGGTGGTTTCGCCTCTGGGTTCAAGACGCCAGAAGAGG
AGACCTTTGAAACACGGTTATATATTTGCAAAGGGAAGAGAGCTATTAGAATTAAGCAGGTTCCCTTTGCACGGTCATCA
TTAAACCATGATGATGTGTTTATCTTAGATACTGAAAAGAAAATTTATCAATTCAATGGTGCAAACTCCAATATCCAAGA
AAGGGCTAAATCACTGGAAGTGATCCAACATTTAAAGGAGAAGTACCATGGGGGCGTGTGTGATGTTGCAATCGTTGATG
ATGGGAAACTACAAGCGGAATCAGACTCTGGTGAATTCTGGGTCCTTTTTGGAGGTTTTGCACCTATTGGGAAAAAAACT
GTTAGTGATGACGATGTTGTACTGGAAACTACAGCACCCAAGCTGTACAGTATCAACGGCGGTGAACTAAAGTTTGAAGA
TATACCTCTTACAAAAGCAGTCCTTGAGAACACAAGATGTTTCTTACTTGACTGTGGGGCTGAAATGTTTGTATGGGTTG
GTCGGGTAACACAACTCGAGGACAGAAAAGCTGCCACTAAAGCCATTGAGGAATTCATCATTAATCAGAAAAGGCCAAAG
ACGACAAGAGTGACACAAGTGATTCAGGGTTATGAAAGCCACTCATTCAAGTCAAAATTTGAATCATGGCCGGCGGGTAC
TACAACAGGGAACTCAGGTGCAGAGGATGGGCGGGGAAAAGTTGCAGCTTTATTGAAGCAACAAGGTGTTGATGTAAAAG
GAGCTCCAAAAAGCAGTACTCCAGTAAACGAGGAAGTTCCTCCTTTGCTTGAAGGTGGTGGAAGACTCGAGGTGTGGTGC
ATTGATGGAAATGCCAAGAGTCCACTTCCAAAAGAGGACAATGGAAAATTTTACAGTGGAGACTGTTATATTGTTCTTTA
TACATATCATTCGGGTGACAAGAAAGAAGAATATTATCTCAATTACTGGATTGGGAAGGAAAGCACAGCGGATGATCAAG
TGATGGGAGCTGAACTAGCCAATACAATGTGGAATTCACTGAAAGGAAGGCCTGTTCTGGGTCGTATTTATCAAGGGAAG
GAACCACCGCAATTTGTTGCCCTTTTCCAGCCCATGGTTATCTTGAAGGGTGGTATCGGTTCTGGATACAAGAAGATTAC
AGAGGAAAAGGGTGCAACCAGTGGAACTTACTCCCCCGAGGGCATAGCTCTGTTTCGGGTGTCTGGAACAGCTATCCATA
ACAATAAAACGCTTCACGTTGACGCGCTAGCTACATCTTTAAGCTCCACAGACTGTTTTGTATTGCAATCTGGAAGTGCT
ATGTTTACATGGCATGGCAATTCTAGCACTTACGAGCAACAGCAGTGGGCAGCGAAAGTTGCTGAGTTCTTGAAGCCTGG
TGCGACAGTGAAACATTGCAAGGAGGGAACAGAGAGTTCTGCTTTCTGGTTTGCTCTTGATGGAAAACAGAGCTATACAA
GCAAACCCATCATGCAGGATACTATTGTCAGAGATCCTCATTTGTATGCCTTCTCAATTAGGAAAGGAAGACTGGAGGTT
ACCGAGATCTTCAATTTTTGCCAAGATGATTTGTTGACTGAAGACTTGATGATTCTTGACACACACGGGGAGGTCTTTAT
TTGGATTGGTCAGTGCGTGGAACCAAAAGAGAAACAAAAGGCGTTCGACATTGGCCAGAAATATATAGAGCATGCGATGT
CGATTGAAGATCTTTCCCCGTATGTACCACTTTACAAAGTTTCTGAAGGGAATGAGCCATGCTTCTTCAAGACATACTTC
TCTTGGGATAGCACAAAATCTGTGATTCATGGGAATTCATTCCAAAAGAAACTTTCACTTCTTTTTGGATTACGCTCAGA
GGGTGCATCTAGGAGCTCTGGTAATGGTGGACCCACACAAAGGGCATCTGCATTAGCCGCTCTATCATCTGCATTCAATC
CATCTTCGCAGCAGAAGCAGGTTAATGATAGTAGGCCTCCAAGCTCTGGTGATGGGCCCACTCAACGTGCCTCTGCACTG
GCTGCTTTGTCCAATGCAGCATTCAATCCATCTCCGCAGCAGAAGCAGGTTAATGATAGTAGGCCTCCAAGCTCGGGTGA
TGGACCCACTCAACGCGCCTCTGCACTGGCTGCCTTGTCCAATGCGTTTAATCCATCCTCAAAACCAAAAACTCCACCTC
CGTCACGTTCAGGTCAAGGGTCACAAAGAGCAGCTGCAGTTGCTGCGCTATCCTCTGTGCTGACTGCTGAGCAGTCTGGA
TCATCTGACAATCTCAGAGCTAGCAAGACGAGCACAACATCAGAAAAGACTGATGCGGAGGTCGTCGTAATATCTCCATC
AGAAGCATCTCCTCGCTCTGAAGCTGGAGAATCCTCTGAATTTCAGTCAGAGAAAGATGCTCCAGTGGATGAGGTGCCAT
CCCAGGTAGATGTAGCAGAGCCTGAGGCGCTGGAGGTGCCAGAGGAACAAACAACTGAACATGTTGGTGAAGCAACATTT
AGCTACGACCGCTTGATATCTAAATCTACTGATCCTATCCGTGGGATAGACTACAAACGCAGAGAGGCGTACTTATCGGA
GAGCGAGTTCCAGACTGTCTTCGGCGTCACCAAGGACGTGTTCTACCTGCAGCCAGGGTGGAAGCAAGAGCTGCAGAAGC
GGAAAGCCGATCTCTTTTGA
Hv_3H:598144458-598144468:- does not have available information here.