
Microexon ID | Ha_6:55246017-55246027:+ |
Species | Helianthus annuus | Coordinates | 6:55246017..55246027 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGAACTAAAG |
Microexon Amino Acid seq | GELK |
Microexon-tag DNA Seq | AGAGATGCCGAAAGTGATCCCCATTTGTTCTCATGCACATTTACAAAAGGAGAACTAAAGGTCATTGAGATCTACAACTTTAACCAAGACGATTTGATGACGGAAGAT |
Microexon-tag Amino Acid Seq | RDAESDPHLFSCTFTKGELKVIEIYNFNQDDLMTED |
Microexon-tag spanning region | 55245853-55246166 |
Microexon-tag prediction score | 0.9629 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG23162x |
Reference Transcript ID | OTG23162 |
Gene ID | HannXRQ_Chr06g0179361 |
Gene Name | VLN5 |
Transcript ID | OTG23162 |
Protein ID | OTG23162 |
Gene ID | HannXRQ_Chr06g0179361 |
Gene Name | VLN5 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >OTG23162 MSVSMRDLDPAFQGAGQKAGIEVWRIENFKPVPVPQSSYGKFFTGDSYLILKTIALKSGALRQDIHYWLGKDTSKDEAGA AALKTVELDAALGGRAVQYREVQGHETERFLSYFKPCIIPQEGGTASGFKHVESEEHKIRMFTCQGKHVVHVKEVPFARS SLNHDDIFILDTANKIFQFNGSNSSIQERAKALEVVQHIKDTYHDGKCDIATVEDGKLMSDAETGEFWGFFGGFAPLPRK TTTDDVKSAVALPTQLFCVEKGQAEPVSADTFTKELLDTNKCYLLDCGAEIYLWMGRSTSLDERKAASGVAEEYLRSQDR LKSQIIRVIENFETVSFRSKFDAWPQSAEVAVSEDGRGKVAALLKRQGVNVRGLLKAAPEKEEPQPYIDCTGNLQVWRVN GQEKILLPVPDQSKFYSGECYIFQYNYPGEDQDECLIGTWFGKKSVEEERSSATSHTNKMVESLKFMASQLQVYEGSEPI LFFAIFQSFLVLKGGLSDGYKTFISENELSDDTYKEDGVALFRVQGSGPENMQAIQVEPVASSLNSSYCYILHSGSSVFT WIGNLRTPEVEELVERQLDVIKPNMQAKLQKEGSESEQFWEILGGKSEYPSQKIARDAESDPHLFSCTFTKGELKVIEIY NFNQDDLMTEDIFILDCHSSIFVWVGQQVDQKLKTQALVIGEKFVKHDFLLEKLTVQTPIYIISEGSEPEFFTRFFTWDS TKSAMHGNSFQRKLSILKNGGRPTLSNKPKRRTPGAHVGRSATNEKPQRARSVSFSPERVRVRGRSPAFNALASAFENPS ARNLSTPPPQVRKPYPKSDSSNVAPRSTAIASLTSTFEQPPREPLMPRSIKPRPKSPPKAESNSKENIMSSKIETLTIQE DVKENEVEDEEGLTLYPYERLITVSTDPAADIDVTKRETYLSSAEFREKFGMTKEAFYKLPKWKQNKLKMALQLF* |
CDS seq | >OTG23162 ATGTCTGTTTCTATGAGAGATTTGGATCCAGCCTTCCAAGGAGCTGGACAAAAAGCAGGAATTGAAGTGTGGCGCATTGA GAATTTTAAACCAGTGCCCGTTCCACAGTCTTCTTATGGCAAGTTTTTTACAGGGGACTCCTATCTTATATTGAAGACTA TTGCTTTGAAAAGCGGTGCACTACGCCAAGACATCCATTATTGGTTAGGTAAAGATACCAGCAAGGATGAAGCTGGAGCA GCAGCACTGAAGACGGTCGAACTCGATGCAGCTCTTGGAGGACGTGCTGTTCAATATCGCGAGGTACAAGGACATGAAAC CGAAAGATTCTTATCTTACTTTAAACCATGCATCATACCTCAAGAAGGCGGAACTGCATCTGGTTTCAAGCATGTTGAAT CTGAGGAGCATAAGATCCGTATGTTTACTTGCCAAGGAAAGCATGTAGTTCATGTAAAAGAGGTTCCTTTTGCTCGATCC TCACTCAATCATGATGATATCTTTATCTTGGATACTGCGAATAAGATATTCCAGTTTAACGGTTCCAATTCAAGCATTCA AGAAAGGGCTAAAGCGCTAGAGGTTGTGCAACATATCAAAGATACGTATCATGATGGGAAGTGTGACATAGCTACTGTTG AGGATGGAAAATTAATGTCTGATGCTGAAACCGGAGAGTTCTGGGGTTTCTTTGGTGGCTTTGCTCCGCTTCCAAGGAAA ACAACAACAGATGACGTCAAAAGTGCCGTTGCTCTTCCCACTCAGCTATTCTGTGTGGAGAAGGGGCAGGCGGAACCGGT TTCTGCCGATACGTTTACAAAGGAGCTGCTGGATACAAATAAATGCTATCTTCTGGATTGCGGGGCTGAAATATACTTAT GGATGGGGAGAAGTACTTCTCTTGATGAAAGAAAAGCCGCAAGTGGAGTTGCAGAAGAATACCTGCGTAGCCAGGATAGA CTGAAGTCTCAAATCATCCGAGTGATTGAAAATTTTGAAACTGTAAGTTTCCGGTCAAAGTTTGATGCTTGGCCTCAATC AGCTGAGGTGGCCGTCTCTGAGGATGGTAGAGGCAAGGTGGCTGCACTTCTAAAGCGTCAAGGGGTCAATGTGAGGGGTT TACTTAAAGCAGCTCCAGAAAAGGAGGAACCTCAACCATATATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTGAAT GGCCAAGAGAAGATTCTTCTTCCGGTCCCTGATCAGTCGAAGTTTTACAGTGGAGAATGTTATATCTTCCAGTATAATTA TCCCGGAGAAGATCAAGACGAATGCCTTATTGGGACATGGTTCGGAAAGAAAAGTGTCGAGGAAGAGCGGAGTTCGGCTA CCTCACATACAAACAAGATGGTTGAGTCGCTCAAATTTATGGCTTCTCAGTTGCAAGTTTATGAAGGAAGCGAGCCTATT CTATTCTTTGCAATCTTTCAGAGCTTTCTCGTTCTTAAGGGTGGTCTAAGTGATGGATACAAGACTTTTATATCAGAGAA TGAACTTTCTGACGACACTTACAAAGAAGACGGGGTTGCGTTATTTCGAGTTCAAGGCTCTGGACCTGAAAACATGCAAG CAATCCAAGTCGAACCCGTTGCGTCATCTTTGAACTCCTCGTACTGCTACATACTACACAGTGGTTCTTCCGTCTTTACA TGGATTGGAAACCTTAGAACTCCCGAAGTAGAGGAACTCGTCGAGAGGCAACTAGATGTCATAAAGCCAAACATGCAGGC AAAGTTACAAAAAGAGGGTTCGGAATCCGAACAATTTTGGGAAATTTTAGGTGGAAAATCCGAATACCCGAGTCAGAAGA TTGCAAGAGATGCCGAAAGTGATCCCCATTTGTTCTCATGCACATTTACAAAAGGAGAACTAAAGGTCATTGAGATCTAC AACTTTAACCAAGACGATTTGATGACGGAAGATATCTTTATTCTCGATTGTCACTCGAGCATCTTTGTTTGGGTAGGGCA GCAGGTTGATCAGAAACTGAAAACACAAGCGTTAGTTATTGGGGAGAAATTCGTGAAGCATGATTTTCTTCTTGAGAAAT TAACGGTTCAAACTCCGATATATATCATATCGGAAGGGAGCGAGCCAGAGTTCTTCACGCGCTTCTTCACATGGGATTCA ACCAAATCTGCAATGCATGGAAACTCGTTTCAAAGGAAACTATCTATACTAAAAAATGGAGGTCGTCCAACCTTGAGTAA CAAACCAAAAAGACGAACACCGGGAGCACATGTAGGAAGGTCTGCTACAAACGAAAAACCGCAGCGTGCAAGAAGTGTGT CTTTTAGCCCAGAGAGGGTTCGTGTTAGAGGAAGATCACCAGCCTTCAATGCTCTTGCTTCTGCATTTGAGAATCCAAGT GCACGGAACCTGTCAACACCCCCGCCCCAAGTGCGGAAGCCTTATCCAAAATCTGATTCGTCAAATGTTGCTCCGAGGTC CACTGCTATAGCGTCACTAACCTCCACTTTCGAACAACCTCCACGAGAACCTCTCATGCCCCGTTCCATCAAACCTAGGC CCAAATCGCCACCAAAGGCTGAGTCGAATTCGAAGGAAAACATAATGAGCAGTAAAATCGAAACCCTAACAATACAAGAA GATGTTAAAGAAAATGAAGTTGAAGATGAGGAAGGGCTCACTTTGTACCCATACGAACGCCTTATAACAGTATCCACCGA CCCTGCTGCAGACATCGATGTAACCAAAAGAGAGACATACTTGTCTTCCGCTGAGTTCAGGGAGAAGTTTGGAATGACGA AAGAAGCCTTCTACAAGCTGCCAAAATGGAAGCAAAATAAACTGAAAATGGCACTTCAACTGTTCTGA |
Microexon DNA seq | GAGAACTAAAG |
Microexon Amino Acid seq | GELK |
Microexon-tag DNA Seq | AGAGATGCCGAAAGTGATCCCCATTTGTTCTCATGCACATTTACAAAAGGAGAACTAAAGGTCATTGAGATCTACAACTTTAACCAAGACGATTTGATGACGGAAGAT |
Microexon-tag Amino Acid seq | RDAESDPHLFSCTFTKGELKVIEIYNFNQDDLMTED |
Transcript ID | Ha.48513.2 |
Gene ID | Ha.48513 |
Gene Name | VLN5 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Ha.48513.2 MSVSMRDLDPAFQGAGQKAGIEVWRIENFKPVPVPQSSYGKFFTGDSYLILKTIALKSGALRQDIHYWLGKDTSKDEAGA AALKTVELDAALGGRAVQYREVQGHETERFLSYFKPCIIPQEGGTASGFKHVESEEHKIRMFTCQGKHVVHVKEVPFARS SLNHDDIFILDTANKIFQFNGSNSSIQERAKALEVVQHIKDTYHDGKCDIATVEDGKLMSDAETGEFWGFFGGFAPLPRK TTTDDVKSAVALPTQLFCVEKGQAEPVSADTFTKELLDTNKCYLLDCGAEIYLWMGRSTSLDERKAASGVAEEYLRSQDR LKSQIIRVIENFETVSFRSKFDAWPQSAEVAVSEDGRGKVAALLKRQGVNVRGLLKAAPEKEEPQPYIDCTGNLQVWRVN GQEKILLPVPDQSKFYSGECYIFQYNYPGEDQDECLIGTWFGKKSVEEERSSATSHTNKMVESLKFMASQLQVYEGSEPI LFFAIFQSFLVLKGGLSDGYKTFISENELSDDTYKEDGVALFRVQGSGPENMQAIQVEPVASSLNSSYCYILHSGSSVFT WIGNLRTPEVEELVERQLDVIKPNMQAKLQKEGSESEQFWEILGGKSEYPSQKIARDAESDPHLFSCTFTKGELKVIEIY NFNQDDLMTEDIFILDCHSSIFVWVGQQVDQKLKTQALVIGEKFVKHDFLLEKLTVQTPIYIISEGSEPEFFTRFFTWDS TKSAMHGNSFQRKLSILKNGGRPTLSNKPKRRTPGAHVGRSATNEKPQRARSVSFSPERVRVRGRSPAFNALASAFENPS ARNLSTPPPQVRKPYPKSDSSNVAPRSTAIASLTSTFEQPPREPLMPRSIKPRPKSPPKAESNSKENIMSSKIETLTIQE DVKENEVEDEEGLTLYPYERLITVSTDPAADIDVTKRETYLSSAEFREKFGMTKEAFYKLPKWKQNKLKMALQLF* |
CDS seq | >Ha.48513.2 ATGTCTGTTTCTATGAGAGATTTGGATCCAGCCTTCCAAGGAGCTGGACAAAAAGCAGGAATTGAAGTGTGGCGCATTGA GAATTTTAAACCAGTGCCCGTTCCACAGTCTTCTTATGGCAAGTTTTTTACAGGGGACTCCTATCTTATATTGAAGACTA TTGCTTTGAAAAGCGGTGCACTACGCCAAGACATCCATTATTGGTTAGGTAAAGATACCAGCAAGGATGAAGCTGGAGCA GCAGCACTGAAGACGGTCGAACTCGATGCAGCTCTTGGAGGACGTGCTGTTCAATATCGCGAGGTACAAGGACATGAAAC CGAAAGATTCTTATCTTACTTTAAACCATGCATCATACCTCAAGAAGGCGGAACTGCATCTGGTTTCAAGCATGTTGAAT CTGAGGAGCATAAGATCCGTATGTTTACTTGCCAAGGAAAGCATGTAGTTCATGTAAAAGAGGTTCCTTTTGCTCGATCC TCACTCAATCATGATGATATCTTTATCTTGGATACTGCGAATAAGATATTCCAGTTTAACGGTTCCAATTCAAGCATTCA AGAAAGGGCTAAAGCGCTAGAGGTTGTGCAACATATCAAAGATACGTATCATGATGGGAAGTGTGACATAGCTACTGTTG AGGATGGAAAATTAATGTCTGATGCTGAAACCGGAGAGTTCTGGGGTTTCTTTGGTGGCTTTGCTCCGCTTCCAAGGAAA ACAACAACAGATGACGTCAAAAGTGCCGTTGCTCTTCCCACTCAGCTATTCTGTGTGGAGAAGGGGCAGGCGGAACCGGT TTCTGCCGATACGTTTACAAAGGAGCTGCTGGATACAAATAAATGCTATCTTCTGGATTGCGGGGCTGAAATATACTTAT GGATGGGGAGAAGTACTTCTCTTGATGAAAGAAAAGCCGCAAGTGGAGTTGCAGAAGAATACCTGCGTAGCCAGGATAGA CTGAAGTCTCAAATCATCCGAGTGATTGAAAATTTTGAAACTGTAAGTTTCCGGTCAAAGTTTGATGCTTGGCCTCAATC AGCTGAGGTGGCCGTCTCTGAGGATGGTAGAGGCAAGGTGGCTGCACTTCTAAAGCGTCAAGGGGTCAATGTGAGGGGTT TACTTAAAGCAGCTCCAGAAAAGGAGGAACCTCAACCATATATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTGAAT GGCCAAGAGAAGATTCTTCTTCCGGTCCCTGATCAGTCGAAGTTTTACAGTGGAGAATGTTATATCTTCCAGTATAATTA TCCCGGAGAAGATCAAGACGAATGCCTTATTGGGACATGGTTCGGAAAGAAAAGTGTCGAGGAAGAGCGGAGTTCGGCTA CCTCACATACAAACAAGATGGTTGAGTCGCTCAAATTTATGGCTTCTCAGTTGCAAGTTTATGAAGGAAGCGAGCCTATT CTATTCTTTGCAATCTTTCAGAGCTTTCTCGTTCTTAAGGGTGGTCTAAGTGATGGATACAAGACTTTTATATCAGAGAA TGAACTTTCTGACGACACTTACAAAGAAGACGGGGTTGCGTTATTTCGAGTTCAAGGCTCTGGACCTGAAAACATGCAAG CAATCCAAGTCGAACCCGTTGCGTCATCTTTGAACTCCTCGTACTGCTACATACTACACAGTGGTTCTTCCGTCTTTACA TGGATTGGAAACCTTAGAACTCCCGAAGTAGAGGAACTCGTCGAGAGGCAACTAGATGTCATAAAGCCAAACATGCAGGC AAAGTTACAAAAAGAGGGTTCGGAATCCGAACAATTTTGGGAAATTTTAGGTGGAAAATCCGAATACCCGAGTCAGAAGA TTGCAAGAGATGCCGAAAGTGATCCCCATTTGTTCTCATGCACATTTACAAAAGGAGAACTAAAGGTCATTGAGATCTAC AACTTTAACCAAGACGATTTGATGACGGAAGATATCTTTATTCTCGATTGTCACTCGAGCATCTTTGTTTGGGTAGGGCA GCAGGTTGATCAGAAACTGAAAACACAAGCGTTAGTTATTGGGGAGAAATTCGTGAAGCATGATTTTCTTCTTGAGAAAT TAACGGTTCAAACTCCGATATATATCATATCGGAAGGGAGCGAGCCAGAGTTCTTCACGCGCTTCTTCACATGGGATTCA ACCAAATCTGCAATGCATGGAAACTCGTTTCAAAGGAAACTATCTATACTAAAAAATGGAGGTCGTCCAACCTTGAGTAA CAAACCAAAAAGACGAACACCGGGAGCACATGTAGGAAGGTCTGCTACAAACGAAAAACCGCAGCGTGCAAGAAGTGTGT CTTTTAGCCCAGAGAGGGTTCGTGTTAGAGGAAGATCACCAGCCTTCAATGCTCTTGCTTCTGCATTTGAGAATCCAAGT GCACGGAACCTGTCAACACCCCCGCCCCAAGTGCGGAAGCCTTATCCAAAATCTGATTCGTCAAATGTTGCTCCGAGGTC CACTGCTATAGCGTCACTAACCTCCACTTTCGAACAACCTCCACGAGAACCTCTCATGCCCCGTTCCATCAAACCTAGGC CCAAATCGCCACCAAAGGCTGAGTCGAATTCGAAGGAAAACATAATGAGCAGTAAAATCGAAACCCTAACAATACAAGAA GATGTTAAAGAAAATGAAGTTGAAGATGAGGAAGGGCTCACTTTGTACCCATACGAACGCCTTATAACAGTATCCACCGA CCCTGCTGCAGACATCGATGTAACCAAAAGAGAGACATACTTGTCTTCCGCTGAGTTCAGGGAGAAGTTTGGAATGACGA AAGAAGCCTTCTACAAGCTGCCAAAATGGAAGCAAAATAAACTGAAAATGGCACTTCAACTGTTCTGA |