Microexon ID Bn_scaffoldC03:74994534-74994544:-
Species Brassica   Napus
Coordinates scaffoldC03:74994534..74994544
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACATTCTGAAG
Microexon Amino Acid seq DILK
Microexon-tag DNA Seq AAAGAACCAGAGAGTGACCCTCACTTGTTCTCTTGCTCGTTCACTAAAGACATTCTGAAGGTGACAGAGATATATAACTTCACTCAGGATGACTTGATGACCGAAGAT
Microexon-tag Amino Acid Seq KEPESDPHLFSCSFTKDILKVTEIYNFTQDDLMTED
Microexon-tag spanning region74994381-74994680
Microexon-tag prediction score0.9578
Overlapped with the annotated transcript (%) 100
New Transcript ID BnaC03T0774700ZSx
Reference Transcript ID BnaC03T0774700ZS
Gene ID BnaC03G0774700ZS
Gene Name NA
Transcript ID BnaC03T0774700ZS
Protein ID
Gene ID BnaC03G0774700ZS
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >BnaC03T0774700ZS
MSVSMRDLDPAFQGAGQKAGIEVWRIENFSPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGT
AAVKTVELDAALGGRAVQYREVQAHETEKFLSYFKPCIIPQEGGVASGFKHVEAEEHITRLFVCRGKHVVHVKEVPFARS
SLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGRLMADAESGEFWGFFGGFAPLPRK
TANDEDKTYTSDITQLFCVEKGQANPVEGDSLKREMLDTSKCYILDCGLEVFVWMGRTTSLDDRKVASGAAEEMIRSSER
PKSQMIRIIEGFETVTFRSKFDTWTQETNTTVSEDGRGRVAALLQRQGVNVRGLMKAAPPKEEPQAFIDCTGNLQVWRVN
GQEKILLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERASAVSMASKMVETMKFVPAQARIYEGKEPL
QFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGLALFRIQGSGPENMQAIQVDPVASSLNSSYCYILHNDSSVFT
WIGNLATSTDQELVERQLDLIKPNLQTRAQKEGSESEQFWELLGGKSEYRSQKLTKEPESDPHLFSCSFTKDILKVTEIY
NFTQDDLMTEDIFIVDCHSEIFVWVGQEVAPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWD
SSKSAMHGNSFQRKLRIVKNGGTPVAEKPKRRTPASYSGRASVPDKSQQRTRSMSFSPERVRVRGRSPAFNALAATFESQ
NARNLSTPPPVVRKLYPRSVTPDSSKLAPKSSAISSRSALFEQRLKTPPQEPSVSKPPKASPKTPESPAMESNSKGKEEK
KENENEEEKSMSSRIGSLTIQEDAKEGVEDEEDLPAHPYERLKTTSSDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYK
LPKWKQNKFKMAVQLF*
CDS seq >BnaC03T0774700ZS
ATGTCTGTTTCAATGAGAGATTTGGATCCAGCTTTCCAAGGAGCTGGACAAAAAGCCGGCATTGAGGTATGGCGTATAGA
GAATTTCAGCCCTACACCCATTCCTAAGTCCTCCATTGGCAAGTTTTTCACCGGAGACTCTTACATAGTATTGAAGACAA
CGGCGTTGAAAACAGGTGCATTGCGCCATGATATCCATTACTGGCTTGGTAAAGATACCTCTCAGGATGAAGCTGGGACT
GCTGCAGTTAAGACGGTTGAATTAGATGCAGCTCTAGGAGGTCGTGCAGTTCAGTATCGGGAAGTTCAAGCCCACGAAAC
CGAGAAATTCTTGTCGTACTTTAAGCCATGTATCATACCTCAAGAAGGTGGTGTAGCTTCAGGATTCAAACACGTGGAAG
CTGAAGAGCATATCACCCGCTTGTTCGTCTGCAGAGGAAAACATGTTGTTCATGTCAAAGAGGTCCCGTTTGCTAGGAGT
TCTTTAAACCATGACGACATTTACATTCTTGACACAAAGTCAAAGATTTTTCAGTTCAATGGATCAAATTCAAGTATCCA
AGAGAGAGCAAAAGCATTGGAAGTGGTTCAATACATCAAAGATACTTACCATGATGGCACATGTGAAGTTGCTACCGTTG
AGGATGGGAGACTTATGGCTGATGCTGAGAGTGGAGAGTTTTGGGGTTTCTTTGGTGGTTTCGCTCCTCTACCTAGAAAA
ACAGCTAATGATGAAGACAAAACTTACACTTCAGATATCACACAATTATTTTGTGTGGAGAAGGGACAAGCAAATCCTGT
TGAAGGAGATTCTTTGAAAAGAGAGATGCTGGATACAAGCAAGTGTTACATTCTTGATTGTGGACTCGAAGTGTTTGTTT
GGATGGGTAGAACCACATCTCTTGATGATAGAAAAGTTGCAAGTGGAGCAGCAGAAGAAATGATTCGTTCATCTGAACGA
CCCAAATCGCAAATGATCCGGATAATAGAGGGGTTTGAAACCGTGACATTTAGATCAAAGTTTGATACCTGGACTCAAGA
AACTAATACAACCGTGTCAGAGGATGGTAGAGGCAGAGTTGCTGCACTTTTGCAACGGCAAGGAGTGAATGTGAGAGGCC
TGATGAAAGCTGCTCCACCTAAAGAAGAGCCTCAAGCTTTCATTGATTGCACGGGGAATCTGCAGGTTTGGCGTGTGAAT
GGTCAGGAAAAGATTCTTCTTCAAGCTGCTGATCATTCGAAGTTCTACAGTGGAGATTGCTATGTTTTCCAGTACTCTTA
TCCTGGAGAAGAAAAGGAAGAAGTTCTTATAGGAACTTGGTTCGGCAAGCAAAGTGTGGAGGAAGAAAGAGCTTCTGCAG
TCTCTATGGCGAGCAAAATGGTTGAGACAATGAAGTTTGTGCCAGCTCAAGCTCGCATCTATGAAGGAAAAGAACCTCTT
CAGTTCTTTGTGATTATGCAAAGCTTTATAGTTTTTAAGGGTGGTATTAGCAGTGGATATAAGAAATATATAGCAGAGAA
AGAAGTTGATGATGATACATACAATGAGAATGGTCTTGCTCTATTCCGCATTCAAGGGTCTGGTCCGGAGAATATGCAAG
CCATACAAGTTGACCCGGTTGCTTCATCATTGAACTCCTCATACTGTTACATACTACATAATGATTCTTCTGTCTTTACT
TGGATTGGGAATCTAGCAACCTCAACTGACCAGGAACTCGTTGAGAGACAGCTTGATCTTATTAAGCCAAACCTTCAGAC
TAGAGCACAAAAGGAAGGTTCAGAATCAGAACAGTTCTGGGAGTTATTAGGAGGCAAAAGCGAATATAGGAGCCAAAAGC
TCACAAAAGAACCAGAGAGTGACCCTCACTTGTTCTCTTGCTCGTTCACTAAAGACATTCTGAAGGTGACAGAGATATAT
AACTTCACTCAGGATGACTTGATGACCGAAGATATATTTATTGTTGACTGTCACTCAGAGATCTTTGTCTGGGTTGGCCA
AGAAGTAGCCCCCAAGAACAAGTTGCTAGCGTTAACTATTGGAGAGAAATTCATAGAGAAAGATTCTCTCCTGGAAAAGT
TATCCCCTGAAGCTCCTATATATGTGATCATGGAAGGTGGTGAGCCAAGTTTCTTCACCCGGTTTTTCACTTCTTGGGAT
TCCTCTAAATCAGCTATGCATGGAAACTCATTCCAAAGAAAACTCAGAATTGTCAAAAATGGTGGAACTCCAGTTGCAGA
AAAGCCGAAACGGCGAACTCCAGCTTCATATAGTGGACGAGCCAGCGTTCCTGACAAGTCCCAGCAGCGGACAAGAAGCA
TGTCGTTTAGTCCAGAGAGGGTTCGCGTGAGGGGAAGATCTCCAGCGTTCAATGCACTGGCAGCAACATTTGAGAGCCAA
AATGCAAGAAACCTCTCAACTCCTCCGCCAGTAGTTAGAAAACTTTACCCCAGATCTGTCACTCCTGATTCATCAAAGCT
TGCTCCCAAGTCTTCAGCCATTTCTTCTCGTAGTGCCCTTTTCGAACAACGGTTAAAAACACCTCCCCAAGAACCTTCAG
TTTCAAAACCACCCAAAGCGAGCCCAAAGACACCTGAGTCTCCAGCTATGGAATCCAACTCAAAAGGGAAGGAAGAGAAG
AAGGAAAATGAGAACGAGGAGGAGAAATCAATGAGCAGCAGGATAGGATCTCTGACGATTCAAGAAGATGCTAAAGAAGG
AGTGGAAGATGAAGAAGACTTACCAGCTCACCCATATGAACGTCTCAAGACAACTTCATCTGATCCTGTCTCAGACATTG
ATGTAACAAGGAGAGAGGCTTACCTTTCATCAGAGGAGTTCAAAGAGAAGTTTGGTATGACTAAAGAAGCTTTCTACAAG
CTGCCTAAATGGAAACAAAACAAATTCAAGATGGCTGTTCAACTCTTCTGA
Bn_scaffoldC03:74994534-74994544:- does not have available information here.