
Microexon ID | Bn_scaffoldC03:74994534-74994544:- |
Species | Brassica Napus | Coordinates | scaffoldC03:74994534..74994544 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACATTCTGAAG |
Microexon Amino Acid seq | DILK |
Microexon-tag DNA Seq | AAAGAACCAGAGAGTGACCCTCACTTGTTCTCTTGCTCGTTCACTAAAGACATTCTGAAGGTGACAGAGATATATAACTTCACTCAGGATGACTTGATGACCGAAGAT |
Microexon-tag Amino Acid Seq | KEPESDPHLFSCSFTKDILKVTEIYNFTQDDLMTED |
Microexon-tag spanning region | 74994381-74994680 |
Microexon-tag prediction score | 0.9578 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | BnaC03T0774700ZSx |
Reference Transcript ID | BnaC03T0774700ZS |
Gene ID | BnaC03G0774700ZS |
Gene Name | NA |
Transcript ID | BnaC03T0774700ZS |
Protein ID | |
Gene ID | BnaC03G0774700ZS |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >BnaC03T0774700ZS MSVSMRDLDPAFQGAGQKAGIEVWRIENFSPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGT AAVKTVELDAALGGRAVQYREVQAHETEKFLSYFKPCIIPQEGGVASGFKHVEAEEHITRLFVCRGKHVVHVKEVPFARS SLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGRLMADAESGEFWGFFGGFAPLPRK TANDEDKTYTSDITQLFCVEKGQANPVEGDSLKREMLDTSKCYILDCGLEVFVWMGRTTSLDDRKVASGAAEEMIRSSER PKSQMIRIIEGFETVTFRSKFDTWTQETNTTVSEDGRGRVAALLQRQGVNVRGLMKAAPPKEEPQAFIDCTGNLQVWRVN GQEKILLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERASAVSMASKMVETMKFVPAQARIYEGKEPL QFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGLALFRIQGSGPENMQAIQVDPVASSLNSSYCYILHNDSSVFT WIGNLATSTDQELVERQLDLIKPNLQTRAQKEGSESEQFWELLGGKSEYRSQKLTKEPESDPHLFSCSFTKDILKVTEIY NFTQDDLMTEDIFIVDCHSEIFVWVGQEVAPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWD SSKSAMHGNSFQRKLRIVKNGGTPVAEKPKRRTPASYSGRASVPDKSQQRTRSMSFSPERVRVRGRSPAFNALAATFESQ NARNLSTPPPVVRKLYPRSVTPDSSKLAPKSSAISSRSALFEQRLKTPPQEPSVSKPPKASPKTPESPAMESNSKGKEEK KENENEEEKSMSSRIGSLTIQEDAKEGVEDEEDLPAHPYERLKTTSSDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYK LPKWKQNKFKMAVQLF* |
CDS seq | >BnaC03T0774700ZS ATGTCTGTTTCAATGAGAGATTTGGATCCAGCTTTCCAAGGAGCTGGACAAAAAGCCGGCATTGAGGTATGGCGTATAGA GAATTTCAGCCCTACACCCATTCCTAAGTCCTCCATTGGCAAGTTTTTCACCGGAGACTCTTACATAGTATTGAAGACAA CGGCGTTGAAAACAGGTGCATTGCGCCATGATATCCATTACTGGCTTGGTAAAGATACCTCTCAGGATGAAGCTGGGACT GCTGCAGTTAAGACGGTTGAATTAGATGCAGCTCTAGGAGGTCGTGCAGTTCAGTATCGGGAAGTTCAAGCCCACGAAAC CGAGAAATTCTTGTCGTACTTTAAGCCATGTATCATACCTCAAGAAGGTGGTGTAGCTTCAGGATTCAAACACGTGGAAG CTGAAGAGCATATCACCCGCTTGTTCGTCTGCAGAGGAAAACATGTTGTTCATGTCAAAGAGGTCCCGTTTGCTAGGAGT TCTTTAAACCATGACGACATTTACATTCTTGACACAAAGTCAAAGATTTTTCAGTTCAATGGATCAAATTCAAGTATCCA AGAGAGAGCAAAAGCATTGGAAGTGGTTCAATACATCAAAGATACTTACCATGATGGCACATGTGAAGTTGCTACCGTTG AGGATGGGAGACTTATGGCTGATGCTGAGAGTGGAGAGTTTTGGGGTTTCTTTGGTGGTTTCGCTCCTCTACCTAGAAAA ACAGCTAATGATGAAGACAAAACTTACACTTCAGATATCACACAATTATTTTGTGTGGAGAAGGGACAAGCAAATCCTGT TGAAGGAGATTCTTTGAAAAGAGAGATGCTGGATACAAGCAAGTGTTACATTCTTGATTGTGGACTCGAAGTGTTTGTTT GGATGGGTAGAACCACATCTCTTGATGATAGAAAAGTTGCAAGTGGAGCAGCAGAAGAAATGATTCGTTCATCTGAACGA CCCAAATCGCAAATGATCCGGATAATAGAGGGGTTTGAAACCGTGACATTTAGATCAAAGTTTGATACCTGGACTCAAGA AACTAATACAACCGTGTCAGAGGATGGTAGAGGCAGAGTTGCTGCACTTTTGCAACGGCAAGGAGTGAATGTGAGAGGCC TGATGAAAGCTGCTCCACCTAAAGAAGAGCCTCAAGCTTTCATTGATTGCACGGGGAATCTGCAGGTTTGGCGTGTGAAT GGTCAGGAAAAGATTCTTCTTCAAGCTGCTGATCATTCGAAGTTCTACAGTGGAGATTGCTATGTTTTCCAGTACTCTTA TCCTGGAGAAGAAAAGGAAGAAGTTCTTATAGGAACTTGGTTCGGCAAGCAAAGTGTGGAGGAAGAAAGAGCTTCTGCAG TCTCTATGGCGAGCAAAATGGTTGAGACAATGAAGTTTGTGCCAGCTCAAGCTCGCATCTATGAAGGAAAAGAACCTCTT CAGTTCTTTGTGATTATGCAAAGCTTTATAGTTTTTAAGGGTGGTATTAGCAGTGGATATAAGAAATATATAGCAGAGAA AGAAGTTGATGATGATACATACAATGAGAATGGTCTTGCTCTATTCCGCATTCAAGGGTCTGGTCCGGAGAATATGCAAG CCATACAAGTTGACCCGGTTGCTTCATCATTGAACTCCTCATACTGTTACATACTACATAATGATTCTTCTGTCTTTACT TGGATTGGGAATCTAGCAACCTCAACTGACCAGGAACTCGTTGAGAGACAGCTTGATCTTATTAAGCCAAACCTTCAGAC TAGAGCACAAAAGGAAGGTTCAGAATCAGAACAGTTCTGGGAGTTATTAGGAGGCAAAAGCGAATATAGGAGCCAAAAGC TCACAAAAGAACCAGAGAGTGACCCTCACTTGTTCTCTTGCTCGTTCACTAAAGACATTCTGAAGGTGACAGAGATATAT AACTTCACTCAGGATGACTTGATGACCGAAGATATATTTATTGTTGACTGTCACTCAGAGATCTTTGTCTGGGTTGGCCA AGAAGTAGCCCCCAAGAACAAGTTGCTAGCGTTAACTATTGGAGAGAAATTCATAGAGAAAGATTCTCTCCTGGAAAAGT TATCCCCTGAAGCTCCTATATATGTGATCATGGAAGGTGGTGAGCCAAGTTTCTTCACCCGGTTTTTCACTTCTTGGGAT TCCTCTAAATCAGCTATGCATGGAAACTCATTCCAAAGAAAACTCAGAATTGTCAAAAATGGTGGAACTCCAGTTGCAGA AAAGCCGAAACGGCGAACTCCAGCTTCATATAGTGGACGAGCCAGCGTTCCTGACAAGTCCCAGCAGCGGACAAGAAGCA TGTCGTTTAGTCCAGAGAGGGTTCGCGTGAGGGGAAGATCTCCAGCGTTCAATGCACTGGCAGCAACATTTGAGAGCCAA AATGCAAGAAACCTCTCAACTCCTCCGCCAGTAGTTAGAAAACTTTACCCCAGATCTGTCACTCCTGATTCATCAAAGCT TGCTCCCAAGTCTTCAGCCATTTCTTCTCGTAGTGCCCTTTTCGAACAACGGTTAAAAACACCTCCCCAAGAACCTTCAG TTTCAAAACCACCCAAAGCGAGCCCAAAGACACCTGAGTCTCCAGCTATGGAATCCAACTCAAAAGGGAAGGAAGAGAAG AAGGAAAATGAGAACGAGGAGGAGAAATCAATGAGCAGCAGGATAGGATCTCTGACGATTCAAGAAGATGCTAAAGAAGG AGTGGAAGATGAAGAAGACTTACCAGCTCACCCATATGAACGTCTCAAGACAACTTCATCTGATCCTGTCTCAGACATTG ATGTAACAAGGAGAGAGGCTTACCTTTCATCAGAGGAGTTCAAAGAGAAGTTTGGTATGACTAAAGAAGCTTTCTACAAG CTGCCTAAATGGAAACAAAACAAATTCAAGATGGCTGTTCAACTCTTCTGA |
Bn_scaffoldC03:74994534-74994544:- does not have available information here.