| Microexon ID | Bn_scaffoldC01:5215911-5215921:- |
| Species | Brassica Napus | Coordinates | scaffoldC01:5215911..5215921 |
| Microexon Cluster ID | MEP27 |
| Size | 11 |
| Phase | 1 |
| Pfam Domain Motif | Gelsolin |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ACGTTCTGAAG |
| Microexon Amino Acid seq | DVLK |
| Microexon-tag DNA Seq | AAAGAACCTGAGAGTGACCCTCACTTGTTCTCCTGCACATTCACTAAAGACGTTCTGAAGGTGACAGAGATATATAACTTCACACAGGATGACTTGATGACCGAAGAT |
| Microexon-tag Amino Acid Seq | KEPESDPHLFSCTFTKDVLKVTEIYNFTQDDLMTED |
| Microexon-tag spanning region | 5215760-5216094 |
| Microexon-tag prediction score | 0.9601 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC01T0085100ZSx |
| Reference Transcript ID | BnaC01T0085100ZS |
| Gene ID | BnaC01G0085100ZS |
| Gene Name | NA |
| Transcript ID | BnaC01T0085100ZS |
| Protein ID | |
| Gene ID | BnaC01G0085100ZS |
| Gene Name | |
| Pfam domain motif | Unknown |
| Motif E-value | NA |
| Motif start | NA |
| Motif end | NA |
| Protein seq | >BnaC01T0085100ZS MSVSMRDLDPAFQGAGQKAGIEVWRIQNFTPAPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGT AAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEAEEHVTRLFVCRGKHVVHVKEVPFARS SLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGRLMADADSGEFWGFFGGFAPLPRK TANAEDKTVTFDIKKLFCVEKGKANPVEADTLEREMLDTNKCYILDCGLEVFVWMGRTTSLDDRKVASGAAEEMIRSSER PKSQMIRIIEGFETVPFRSKFDTWTQETNTTVSEDGRGRVAALLLRQGVNVRGLMKAAPPKEELEAFIDCTGNLQVWRVN GQEKILLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERASAVSMASKMVESMKFVPAQARIYEGKEPV QFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGLALFRIQGSGPDNMQAIQVDPVASSLNSSYCYILHNDSSVFT WMGNLATSTDQELVERQLDLIKPNLQTRAQKEGSESEQFWELLGGKTEYSSQKLTKEPESDPHLFSCTFTKDVLKVTEIY NFTQDDLMTEDIFIVDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWD SSKSSMHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRASVPEKSQQRSRTMSLSPDRVRVRGRSPAFNALAATFENQ NARNLSTPPPVVRKLYPRSVTPDSARLAPKSSAIASRSALFEKFKTPPQEPLIPKSIKASPKTPESPAPESSSEGQEEKK DNDKEEEKSMSSKIVSLTIQEDAKEGVEDEEDLPAYPYERLKTTSPDPVTDIDVTRREAYLSSEEFKEKFGMTKEAFYKL PKWKQNKFKMAVQLF* |
| CDS seq | >BnaC01T0085100ZS ATGTCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAAGGAGCTGGACAGAAAGCCGGTATTGAGGTATGGCGTATACA GAATTTTACCCCTGCACCCATCCCAAAGTCTTCCATTGGGAAGTTTTTCACCGGAGACTCTTACATAGTACTGAAGACAA CGGCGTTAAAAACAGGTGCGTTGCGCCACGATATTCATTACTGGCTTGGTAAAGATACCTCTCAAGATGAAGCTGGGACT GCTGCAGTTAAGACGGTTGAATTAGATGCCGCTCTTGGAGGTCGTGCAGTTCAATATCGAGAAGTTCAAGGCCACGAAAC CGAGAAGTTCTTGTCTTATTTTAAGCCGTGTATCATACCTCAAGAAGGTGGAGTAGCTTCAGGGTTCAAACATGTGGAAG CTGAAGAACATGTTACCCGCTTGTTCGTCTGCAGAGGAAAACATGTTGTCCATGTCAAGGAGGTTCCGTTTGCTCGGAGT TCTTTAAACCATGACGATATATACATTCTTGACACAAAGTCAAAGATTTTCCAGTTCAATGGATCTAATTCAAGTATCCA AGAGAGAGCAAAAGCATTAGAAGTGGTTCAGTACATCAAAGATACTTACCATGATGGCACATGCGAAGTTGCCACAGTTG AGGATGGGAGACTTATGGCTGATGCTGATAGTGGAGAGTTTTGGGGGTTCTTTGGTGGGTTCGCTCCTTTACCTAGAAAA ACAGCTAATGCTGAAGACAAAACTGTCACTTTCGATATCAAAAAACTATTTTGTGTGGAGAAGGGAAAGGCAAATCCTGT TGAAGCAGATACTTTGGAGAGGGAGATGCTTGATACAAACAAGTGCTACATTCTTGACTGTGGACTCGAAGTGTTTGTTT GGATGGGACGAACCACATCTCTTGATGATAGAAAAGTTGCCAGTGGAGCAGCAGAAGAAATGATCCGTTCATCTGAACGA CCTAAATCGCAAATGATCCGCATAATAGAAGGGTTTGAAACAGTGCCATTCCGATCAAAGTTTGATACATGGACTCAAGA AACTAATACAACTGTGTCAGAGGATGGTAGAGGCAGAGTTGCTGCTCTCTTGCTACGACAAGGAGTAAACGTGAGAGGAC TAATGAAAGCTGCTCCTCCTAAAGAGGAGCTCGAAGCTTTCATTGATTGCACGGGGAATCTGCAGGTTTGGCGTGTGAAT GGTCAGGAAAAGATACTCCTTCAAGCTGCTGATCATTCGAAGTTCTACAGTGGAGATTGCTATGTTTTCCAGTATTCTTA TCCTGGAGAAGAGAAAGAAGAAGTGCTTATAGGGACTTGGTTCGGAAAGCAAAGTGTGGAGGAAGAAAGAGCTTCTGCAG TCTCTATGGCGAGCAAAATGGTTGAGTCAATGAAGTTTGTGCCAGCCCAAGCTCGCATCTATGAGGGAAAGGAACCTGTT CAGTTCTTCGTCATTATGCAAAGCTTTATAGTTTTCAAGGGTGGTATCAGCAGTGGATACAAGAAATACATAGCAGAGAA AGAAGTTGATGATGATACATACAATGAGAATGGTCTTGCTCTTTTCCGCATTCAAGGGTCTGGTCCGGATAATATGCAAG CAATACAAGTTGACCCGGTTGCTTCGTCACTGAACTCCTCATATTGTTACATACTACATAATGATTCTTCTGTCTTTACT TGGATGGGGAATCTAGCTACCTCAACTGACCAGGAACTCGTCGAGAGGCAGCTCGATCTTATTAAGCCAAACTTACAGAC GAGAGCACAAAAGGAAGGTTCAGAATCCGAACAGTTCTGGGAGTTATTAGGAGGCAAAACCGAATATTCCAGCCAAAAGC TCACAAAAGAACCTGAGAGTGACCCTCACTTGTTCTCCTGCACATTCACTAAAGACGTTCTGAAGGTGACAGAGATATAT AACTTCACACAGGATGACTTGATGACCGAAGATATATTTATAGTAGACTGTCACTCAGAGATCTTTGTATGGGTTGGCCA AGAAGTAGTCCCCAAGAACAAGTTGCTAGCGTTAACTATTGGAGAGAAATTCATCGAGAAAGATTCTCTTCTGGAAAAGT TATCCCCTGAAGCCCCTATATATGTGATCATGGAAGGTGGTGAGCCAAGTTTCTTCACCCGGTTTTTCACTTCTTGGGAT TCCTCAAAATCTTCTATGCATGGAAACTCATTCCAAAGAAAACTCAAAATTGTCAAAAATGGTGGAACTCCAGTTGCAGA TAAACCGAAACGAAGAACACCAGCTTCATATGGTGGCCGTGCCAGTGTTCCTGAAAAGTCACAGCAGCGGTCAAGAACCA TGTCGTTAAGTCCAGACAGGGTTCGCGTGAGGGGTAGATCTCCAGCGTTCAATGCACTCGCAGCAACATTTGAGAACCAG AATGCAAGAAACCTCTCAACTCCTCCCCCAGTAGTTAGAAAACTCTACCCGAGATCTGTTACTCCTGATTCCGCAAGGCT TGCTCCCAAGTCTTCAGCCATTGCTTCTCGTAGTGCCCTTTTCGAAAAATTCAAAACACCTCCTCAAGAACCTTTAATCC CAAAATCCATCAAAGCGAGCCCGAAGACACCTGAGTCTCCAGCGCCAGAATCCAGCTCAGAAGGACAGGAAGAGAAGAAG GATAATGACAAGGAGGAGGAGAAATCGATGAGCAGCAAGATAGTATCTCTGACTATCCAAGAAGATGCTAAAGAAGGAGT GGAAGACGAAGAAGATTTGCCAGCTTACCCATACGAACGTCTCAAGACAACTTCACCTGATCCTGTCACAGACATTGATG TAACAAGGAGAGAGGCTTACCTTTCATCTGAGGAGTTCAAAGAGAAGTTTGGTATGACGAAAGAAGCTTTCTACAAGCTG CCTAAATGGAAACAGAACAAATTCAAGATGGCTGTTCAGCTCTTCTGA |
Bn_scaffoldC01:5215911-5215921:- does not have available information here.