
Microexon ID | At_5:23216003-23216013:+ |
Species | Arabidopsis thaliana | Coordinates | 5:23216003..23216013 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAAGTCTGAAG |
Microexon Amino Acid seq | ESLK |
Microexon-tag DNA Seq | AGGGATGGAGAGAGTGATCCTCATCTCTTTTCTTGCACATATACAAACGAAAGTCTGAAGGCTACAGAGATCTTCAACTTCACTCAAGATGATTTGATGACTGAAGAT |
Microexon-tag Amino Acid Seq | RDGESDPHLFSCTYTNESLKATEIFNFTQDDLMTED |
Microexon-tag spanning region | 23215820-23216171 |
Microexon-tag prediction score | 0.9427 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT5G57320.1x |
Reference Transcript ID | AT5G57320.1 |
Gene ID | AT5G57320 |
Gene Name | VLN5 |
Transcript ID | AT5G57320.1 |
Protein ID | AT5G57320.1 |
Gene ID | AT5G57320 |
Gene Name | VLN5 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT5G57320.1 MTFSMRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGSLHHDIHYWLGKDSSQDEAGA VAVMTVELDSALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFNHVKPEEHQTRLYICKGKHVVRVKEVPFVRS TLNHEDVFILDTESKIFQFSGSKSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRMMADAEAGEFWGLFGGFAPLPKK PAVNDDETAASDGIKLFSVEKGQTDAVEAECLTKELLDTNKCYILDCGLELFVWKGRSTSIDQRKSATEAAEEFFRSSEP PKSNLVSVMEGYETVMFRSKFDSWPASSTIAEPQQGRGKVAALLQRQGVNVQGLVKTSSSSSKDEPKPYIDGTGNLQVWR INCEEKILLEAAEQSKFYSGDCYILQYSYPGEDREEHLVGTWFGKQSVEEDRASAISLANKMVESMKFVPAQARINEGKE PIQFFVIMQSFITFKGGVSDAFKKYIAENDIPDTTYEAEGVALFRVQGSGPENMQAIQIEAASAGLNSSHCYILHGDSTV FTWCGNLTSSEDQELMERMLDLIKPNEPTKAQKEGSESEQFWELLGGKSEYPSQKIKRDGESDPHLFSCTYTNESLKATE IFNFTQDDLMTEDIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLLENLASETPIYIVTEGNEPPFFTRFFTW DSSKSGMHGDSFQRKLAILTNKGKPLLDKPKRRVPAYSSRSTVPDKSQPRSRSMTFSPDRARVRGRSPAFNALAANFEKL NIRNQSTPPPMVSPMVRKLYPKSHAPDLSKIAPKSAIAARTALFEKPTPTSQEPPTSPSSSEATNQAEAPKSTSETNEEE AMSSINEDSKEEEAEEESSLPTFPYERLKTDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFYKLPKWKQNKLKMSVN LF* |
CDS seq | >AT5G57320.1 ATGACGTTTTCCATGAGAGATTTAGATCAGGCTCTTCAAGGAGCTGGCCAGAAATCCGGGATTGAAATATGGCGCATCGA GAACTTCAAACCTGTCACTGTTCCACAAGAGTCTCATGGGAAATTTTTCACCGGGGATTCCTATATAGTCTTAAAGACCA CAGCGTCAAGAAGCGGTTCTTTGCATCATGATATTCACTACTGGCTCGGTAAAGATTCCAGCCAGGATGAAGCAGGTGCT GTAGCCGTCATGACTGTTGAATTAGATTCAGCATTAGGTGGACGTGCTGTTCAGTACCGAGAAGTACAGGGTCACGAAAC CGAGAAGTTTCTTTCCTACTTCAAACCTTGCATAATACCTCAAGAAGGTGGAGTTGCTTCAGGGTTCAACCATGTAAAGC CCGAGGAGCATCAGACGCGTCTGTATATCTGCAAAGGCAAACATGTCGTCCGTGTTAAAGAGGTTCCGTTTGTTCGATCG ACTCTCAACCACGAAGACGTTTTTATTCTTGATACAGAGTCTAAAATTTTTCAATTCAGTGGTTCCAAGTCGAGTATTCA AGAAAGAGCAAAAGCTCTTGAGGTTGTTCAGTACATTAAAGACACTTACCATGATGGAAAGTGCGATATCGCAGCTGTTG AGGATGGGAGGATGATGGCTGATGCTGAAGCTGGAGAGTTTTGGGGCTTGTTTGGTGGGTTTGCTCCGCTTCCTAAGAAA CCAGCAGTCAATGATGACGAAACCGCTGCATCTGATGGTATCAAACTTTTCAGTGTCGAGAAGGGACAGACAGATGCCGT AGAGGCTGAGTGTTTGACGAAAGAGCTTCTGGACACTAACAAATGTTATATTCTCGATTGCGGTCTTGAATTGTTCGTTT GGAAGGGACGAAGTACTTCAATCGACCAAAGAAAGAGCGCAACTGAAGCTGCAGAAGAATTTTTCCGTTCGTCTGAACCG CCAAAATCAAACCTGGTCAGTGTGATGGAAGGGTATGAAACAGTGATGTTCCGATCTAAGTTTGATTCATGGCCGGCTTC AAGTACCATAGCTGAGCCCCAACAAGGCAGAGGCAAAGTCGCAGCTCTTTTGCAGCGGCAAGGAGTTAACGTTCAAGGCC TGGTTAAGACTTCTTCTTCTTCTTCTAAAGACGAACCGAAGCCATACATTGATGGTACAGGAAATCTCCAGGTCTGGCGA ATCAATTGTGAAGAAAAGATCCTTCTCGAAGCAGCAGAGCAATCAAAGTTCTATAGCGGGGATTGTTATATACTCCAGTA CTCATACCCAGGAGAAGACAGAGAGGAACATCTAGTGGGTACTTGGTTTGGCAAGCAAAGCGTTGAGGAAGACAGAGCAT CTGCTATTTCTTTGGCAAACAAGATGGTTGAATCCATGAAGTTTGTGCCGGCTCAGGCTCGCATTAATGAGGGAAAAGAG CCAATTCAGTTTTTTGTGATCATGCAAAGCTTCATCACATTTAAGGGTGGTGTAAGTGATGCTTTCAAAAAGTACATAGC TGAGAACGACATCCCTGATACTACTTACGAAGCAGAAGGTGTTGCACTGTTTCGGGTTCAAGGTTCTGGACCCGAGAACA TGCAAGCCATACAGATAGAAGCGGCTTCCGCAGGACTAAATTCTTCGCACTGTTATATATTACACGGTGATTCTACTGTT TTCACTTGGTGTGGCAATCTTACTTCCTCGGAAGATCAAGAACTTATGGAAAGAATGTTGGATTTGATTAAGCCAAATGA ACCCACTAAGGCACAAAAGGAAGGCTCAGAGTCTGAACAGTTTTGGGAATTATTAGGAGGCAAATCAGAATATCCGAGCC AAAAGATCAAAAGGGATGGAGAGAGTGATCCTCATCTCTTTTCTTGCACATATACAAACGAAAGTCTGAAGGCTACAGAG ATCTTCAACTTCACTCAAGATGATTTGATGACTGAAGATATCTTCATACTTGATTGTCACACTGAGGTCTTTGTCTGGGT GGGACAACAAGTTGACCCAAAGAAGAAACCTCAAGCTTTGGACATTGGAGAGAACTTTCTTAAGCATGATTTCCTCCTAG AGAATCTAGCAAGTGAAACACCGATATACATTGTAACAGAGGGAAACGAACCTCCATTTTTCACTCGGTTCTTCACCTGG GACTCTTCTAAATCTGGAATGCATGGAGACTCTTTCCAGAGAAAGCTTGCGATCCTGACAAATAAAGGAAAGCCGCTTCT AGATAAACCTAAAAGGAGAGTCCCTGCATACAGTAGCAGGTCCACCGTTCCAGACAAATCGCAGCCTCGGTCCAGAAGTA TGACTTTTAGTCCAGACAGGGCCCGCGTGAGGGGACGGTCTCCAGCTTTCAACGCACTTGCAGCAAACTTTGAGAAACTA AATATAAGAAACCAATCAACTCCACCACCTATGGTTAGTCCAATGGTCCGGAAGCTTTACCCGAAATCTCATGCCCCAGA CCTCTCGAAGATAGCTCCTAAATCCGCTATAGCTGCCCGTACAGCGCTTTTTGAAAAACCTACTCCTACTTCTCAAGAAC CACCTACTAGCCCCAGTTCTTCAGAAGCTACAAACCAAGCAGAAGCACCAAAATCGACATCAGAGACAAACGAGGAAGAA GCAATGAGCAGCATCAATGAAGACTCAAAAGAAGAAGAAGCAGAAGAAGAGAGCAGCCTCCCTACTTTCCCATATGAACG CCTTAAAACCGACTCAGAGGATCCTGTTTCAGATGTCGACCTCACTAGAAGAGAGGCATACTTGACTTCAGTAGAGTTCA AGGAGAAGTTTGAGATGACAAAGAATGAGTTCTACAAACTGCCTAAATGGAAACAAAACAAGCTCAAAATGTCTGTCAAT CTCTTCTAA |
Microexon DNA seq | AAAGTCTGAAG |
Microexon Amino Acid seq | ESLK |
Microexon-tag DNA Seq | AGGGATGGAGAGAGTGATCCTCATCTCTTTTCTTGCACATATACAAACGAAAGTCTGAAGGCTACAGAGATCTTCAACTTCACTCAAGATGATTTGATGACTGAAGAT |
Microexon-tag Amino Acid seq | RDGESDPHLFSCTYTNESLKATEIFNFTQDDLMTED |
Transcript ID | At.26873.1 |
Gene ID | At.26873 |
Gene Name | VLN5 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >At.26873.1 MTFSMRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGSLHHDIHYWLGKDSSQDEAGA VAVMTVELDSALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFNHVKPEEHQTRLYICKGKHVVRVKEVPFVRS TLNHEDVFILDTESKIFQFSGSKSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRMMADAEAGEFWGLFGGFAPLPKK PAVNDDETAASDGIKLFSVEKGQTDAVEAECLTKELLDTNKCYILDCGLELFVWKGRSTSIDQRKSATEAAEEFFRSSEP PKSNLVSVMEGYETVMFRSKFDSWPASSTIAEPQQGRGKVAALLQRQGVNVQGLVKTSSSSSKDEPKPYIDGTGNLQVWR INCEEKILLEAAEQSKFYSGDCYILQYSYPGEDREEHLVGTWFGKQSVEEDRASAISLANKMVESMKFVPAQARINEGKE PIQFFVIMQSFITFKGGVSDAFKKYIAENDIPDTTYEAEGVALFRVQGSGPENMQAIQIEAASAGLNSSHCYILHGDSTV FTWCGNLTSSEDQELMERMLDLIKPNEPTKAQKEGSESEQFWELLGGKSEYPSQKIKRDGESDPHLFSCTYTNESLKATE IFNFTQDDLMTEDIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLLENLASETPIYIVTEGNEPPFFTRFFTW DSSKSGMHGDSFQRKLAILTNKGKPLLDKPKRRVPAYSSRSTVPDKSQPRSRSMTFSPDRARVRGRSPAFNALAANFEKL NIRNQSTPPPMVSPMVRKLYPKSHAPDLSKIAPKSAIAARTALFEKPTPTSQEPPTSPSSSEATNQAEAPKSTSETNEEE AMSSINEDSKEEEAEEESSLPTFPYERLKTDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFYKLPKWKQNKLKMSVN LF* |
CDS seq | >At.26873.1 ATGACGTTTTCCATGAGAGATTTAGATCAGGCTCTTCAAGGAGCTGGCCAGAAATCCGGGATTGAAATATGGCGCATCGA GAACTTCAAACCTGTCACTGTTCCACAAGAGTCTCATGGGAAATTTTTCACCGGGGATTCCTATATAGTCTTAAAGACCA CAGCGTCAAGAAGCGGTTCTTTGCATCATGATATTCACTACTGGCTCGGTAAAGATTCCAGCCAGGATGAAGCAGGTGCT GTAGCCGTCATGACTGTTGAATTAGATTCAGCATTAGGTGGACGTGCTGTTCAGTACCGAGAAGTACAGGGTCACGAAAC CGAGAAGTTTCTTTCCTACTTCAAACCTTGCATAATACCTCAAGAAGGTGGAGTTGCTTCAGGGTTCAACCATGTAAAGC CCGAGGAGCATCAGACGCGTCTGTATATCTGCAAAGGCAAACATGTCGTCCGTGTTAAAGAGGTTCCGTTTGTTCGATCG ACTCTCAACCACGAAGACGTTTTTATTCTTGATACAGAGTCTAAAATTTTTCAATTCAGTGGTTCCAAGTCGAGTATTCA AGAAAGAGCAAAAGCTCTTGAGGTTGTTCAGTACATTAAAGACACTTACCATGATGGAAAGTGCGATATCGCAGCTGTTG AGGATGGGAGGATGATGGCTGATGCTGAAGCTGGAGAGTTTTGGGGCTTGTTTGGTGGGTTTGCTCCGCTTCCTAAGAAA CCAGCAGTCAATGATGACGAAACCGCTGCATCTGATGGTATCAAACTTTTCAGTGTCGAGAAGGGACAGACAGATGCCGT AGAGGCTGAGTGTTTGACGAAAGAGCTTCTGGACACTAACAAATGTTATATTCTCGATTGCGGTCTTGAATTGTTCGTTT GGAAGGGACGAAGTACTTCAATCGACCAAAGAAAGAGCGCAACTGAAGCTGCAGAAGAATTTTTCCGTTCGTCTGAACCG CCAAAATCAAACCTGGTCAGTGTGATGGAAGGGTATGAAACAGTGATGTTCCGATCTAAGTTTGATTCATGGCCGGCTTC AAGTACCATAGCTGAGCCCCAACAAGGCAGAGGCAAAGTCGCAGCTCTTTTGCAGCGGCAAGGAGTTAACGTTCAAGGCC TGGTTAAGACTTCTTCTTCTTCTTCTAAAGACGAACCGAAGCCATACATTGATGGTACAGGAAATCTCCAGGTCTGGCGA ATCAATTGTGAAGAAAAGATCCTTCTCGAAGCAGCAGAGCAATCAAAGTTCTATAGCGGGGATTGTTATATACTCCAGTA CTCATACCCAGGAGAAGACAGAGAGGAACATCTAGTGGGTACTTGGTTTGGCAAGCAAAGCGTTGAGGAAGACAGAGCAT CTGCTATTTCTTTGGCAAACAAGATGGTTGAATCCATGAAGTTTGTGCCGGCTCAGGCTCGCATTAATGAGGGAAAAGAG CCAATTCAGTTTTTTGTGATCATGCAAAGCTTCATCACATTTAAGGGTGGTGTAAGTGATGCTTTCAAAAAGTACATAGC TGAGAACGACATCCCTGATACTACTTACGAAGCAGAAGGTGTTGCACTGTTTCGGGTTCAAGGTTCTGGACCCGAGAACA TGCAAGCCATACAGATAGAAGCGGCTTCCGCAGGACTAAATTCTTCGCACTGTTATATATTACACGGTGATTCTACTGTT TTCACTTGGTGTGGCAATCTTACTTCCTCGGAAGATCAAGAACTTATGGAAAGAATGTTGGATTTGATTAAGCCAAATGA ACCCACTAAGGCACAAAAGGAAGGCTCAGAGTCTGAACAGTTTTGGGAATTATTAGGAGGCAAATCAGAATATCCGAGCC AAAAGATCAAAAGGGATGGAGAGAGTGATCCTCATCTCTTTTCTTGCACATATACAAACGAAAGTCTGAAGGCTACAGAG ATCTTCAACTTCACTCAAGATGATTTGATGACTGAAGATATCTTCATACTTGATTGTCACACTGAGGTCTTTGTCTGGGT GGGACAACAAGTTGACCCAAAGAAGAAACCTCAAGCTTTGGACATTGGAGAGAACTTTCTTAAGCATGATTTCCTCCTAG AGAATCTAGCAAGTGAAACACCGATATACATTGTAACAGAGGGAAACGAACCTCCATTTTTCACTCGGTTCTTCACCTGG GACTCTTCTAAATCTGGAATGCATGGAGACTCTTTCCAGAGAAAGCTTGCGATCCTGACAAATAAAGGAAAGCCGCTTCT AGATAAACCTAAAAGGAGAGTCCCTGCATACAGTAGCAGGTCCACCGTTCCAGACAAATCGCAGCCTCGGTCCAGAAGTA TGACTTTTAGTCCAGACAGGGCCCGCGTGAGGGGACGGTCTCCAGCTTTCAACGCACTTGCAGCAAACTTTGAGAAACTA AATATAAGAAACCAATCAACTCCACCACCTATGGTTAGTCCAATGGTCCGGAAGCTTTACCCGAAATCTCATGCCCCAGA CCTCTCGAAGATAGCTCCTAAATCCGCTATAGCTGCCCGTACAGCGCTTTTTGAAAAACCTACTCCTACTTCTCAAGAAC CACCTACTAGCCCCAGTTCTTCAGAAGCTACAAACCAAGCAGAAGCACCAAAATCGACATCAGAGACAAACGAGGAAGAA GCAATGAGCAGCATCAATGAAGACTCAAAAGAAGAAGAAGCAGAAGAAGAGAGCAGCCTCCCTACTTTCCCATATGAACG CCTTAAAACCGACTCAGAGGATCCTGTTTCAGATGTCGACCTCACTAGAAGAGAGGCATACTTGACTTCAGTAGAGTTCA AGGAGAAGTTTGAGATGACAAAGAATGAGTTCTACAAACTGCCTAAATGGAAACAAAACAAGCTCAAAATGTCTGTCAAT CTCTTCTAA |