
Microexon ID | At_4:14757778-14757788:+ |
Species | Arabidopsis thaliana | Coordinates | 4:14757778..14757788 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AAGTTCTCAAG |
Microexon Amino Acid seq | EVLK |
Microexon-tag DNA Seq | AAGGAACCCGAGCGTGACCCTCACTTGTTCTCTTGTACATTCACAAAAGAAGTTCTCAAGGTGACAGAGATATATAACTTTACACAGGATGACTTGATGACCGAAGAT |
Microexon-tag Amino Acid Seq | KEPERDPHLFSCTFTKEVLKVTEIYNFTQDDLMTED |
Microexon-tag spanning region | 14757621-14757952 |
Microexon-tag prediction score | 0.951 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT4G30160.1x |
Reference Transcript ID | AT4G30160.1 |
Gene ID | AT4G30160 |
Gene Name | VLN4 |
Transcript ID | AT4G30160.1 |
Protein ID | AT4G30160.1 |
Gene ID | AT4G30160 |
Gene Name | VLN4 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT4G30160.1 MSVSMRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGT AAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVVAEEHITRLFVCRGKHVVHVKEVPFARS SLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGKLMADADSGEFWGFFGGFAPLPRK TANDEDKTYNSDITRLFCVEKGQANPVEGDTLKREMLDTNKCYILDCGIEVFVWMGRTTSLDDRKIASKAAEEMIRSSER PKSQMIRIIEGFETVPFRSKFESWTQETNTTVSEDGRGRVAALLQRQGVNVRGLMKAAPPKEEPQVFIDCTGNLQVWRVN GQAKTLLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERGSAVSMASKMVESMKFVPAQARIYEGKEPI QFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGVALFRIQGSGPENMQAIQVDPVAASLNSSYYYILHNDSSVFT WAGNLSTATDQELAERQLDLIKPNQQSRAQKEGSESEQFWELLGGKAEYSSQKLTKEPERDPHLFSCTFTKEVLKVTEIY NFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWD SSKSAMHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRGRSPAFNALAATFESQ NARNLSTPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEKIPPQEPSIPKPVKASPKTPESPAPESNSKEQEEKK ENDKEEGSMSSRIESLTIQEDAKEGVEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLP KWKQNKFKMAVQLF* |
CDS seq | >AT4G30160.1 ATGTCTGTTTCTATGAGAGATTTAGATCCAGCTTTCCAAGGAGCTGGACAGAAAGCTGGTATTGAGATATGGCGTATAGA GAATTTCATCCCTACCCCAATTCCAAAATCTTCTATTGGGAAGTTTTTCACCGGAGATTCTTACATAGTATTGAAGACAA CGGCGTTAAAAACTGGTGCATTGCGCCATGATATCCATTACTGGCTTGGTAAAGATACCTCTCAGGATGAAGCCGGTACT GCTGCAGTTAAGACAGTTGAATTAGATGCTGCTCTAGGAGGTCGTGCAGTGCAGTATCGGGAAGTTCAAGGCCACGAGAC TGAGAAATTCTTGTCTTATTTTAAGCCATGTATCATTCCTCAAGAAGGTGGAGTAGCATCAGGATTCAAGCATGTCGTAG CTGAAGAACATATTACCCGCTTGTTCGTCTGCAGAGGAAAACATGTTGTCCATGTCAAAGAGGTTCCTTTTGCTCGGAGT TCATTAAACCATGACGATATTTACATTCTTGACACAAAGTCCAAGATTTTCCAATTCAATGGATCCAATTCTAGTATCCA AGAGAGAGCAAAAGCACTGGAAGTGGTTCAGTACATCAAAGATACTTACCATGATGGGACATGTGAAGTTGCTACAGTTG AGGATGGGAAACTTATGGCTGATGCTGATAGTGGAGAATTTTGGGGTTTCTTTGGTGGGTTTGCTCCGCTACCTAGGAAA ACAGCTAATGATGAAGACAAAACTTATAATTCAGATATCACCAGATTATTTTGTGTCGAGAAGGGACAGGCAAATCCTGT TGAAGGCGATACATTGAAGAGGGAGATGCTGGATACAAACAAGTGTTACATTCTTGATTGTGGAATTGAAGTGTTTGTTT GGATGGGAAGAACCACTTCTCTTGATGATAGAAAAATTGCGAGTAAAGCAGCAGAAGAAATGATCCGTTCATCTGAACGA CCGAAATCGCAAATGATCCGCATAATAGAAGGGTTTGAAACAGTACCATTCCGATCAAAGTTTGAATCTTGGACTCAAGA AACTAATACAACCGTGTCAGAAGATGGTAGAGGCAGAGTTGCTGCTCTTTTGCAACGACAAGGAGTAAATGTCAGAGGCC TGATGAAAGCTGCTCCGCCTAAAGAAGAGCCTCAGGTTTTCATCGACTGCACGGGAAATCTGCAGGTTTGGCGTGTGAAT GGTCAGGCAAAGACTCTCCTTCAAGCTGCTGATCATTCAAAATTCTACAGTGGAGATTGCTATGTTTTCCAGTATTCTTA TCCCGGAGAAGAAAAAGAAGAAGTTCTTATAGGAACGTGGTTTGGCAAACAAAGTGTGGAGGAAGAAAGAGGTTCTGCAG TCTCTATGGCAAGCAAAATGGTTGAGTCAATGAAATTTGTCCCAGCCCAAGCTCGCATTTATGAAGGAAAGGAACCAATT CAATTCTTCGTGATTATGCAAAGCTTTATCGTTTTCAAGGGTGGTATTAGCAGTGGATACAAGAAATACATAGCCGAGAA AGAAGTTGATGATGATACATACAATGAGAATGGTGTTGCTCTATTCCGAATTCAAGGGTCTGGTCCGGAAAATATGCAAG CTATACAAGTTGACCCGGTTGCTGCATCACTGAACTCCTCGTACTATTACATACTACATAATGATTCTTCCGTCTTTACT TGGGCTGGAAATTTATCAACCGCAACTGACCAAGAACTGGCGGAAAGGCAGCTAGATCTGATTAAGCCAAATCAACAATC TAGAGCACAAAAGGAAGGTTCAGAATCAGAACAGTTCTGGGAGTTATTAGGAGGCAAAGCTGAATATTCGAGCCAAAAGC TCACAAAGGAACCCGAGCGTGACCCTCACTTGTTCTCTTGTACATTCACAAAAGAAGTTCTCAAGGTGACAGAGATATAT AACTTTACACAGGATGACTTGATGACCGAAGATATATTTATCATAGACTGTCACTCAGAAATCTTTGTCTGGGTTGGCCA AGAAGTAGTCCCAAAGAACAAGTTACTAGCTTTAACTATTGGAGAGAAATTCATCGAGAAAGATTCTCTCCTGGAGAAGT TATCCCCTGAAGCCCCTATTTATGTGATCATGGAAGGCGGTGAGCCGTCATTCTTCACCCGGTTCTTCACTTCTTGGGAT TCCTCAAAATCCGCTATGCATGGAAACTCATTCCAAAGAAAACTTAAAATTGTCAAAAATGGTGGAACTCCAGTGGCAGA TAAACCAAAACGAAGAACTCCAGCTTCATATGGTGGCCGTGCCAGCGTTCCTGACAAGTCGCAGCAGCGGTCAAGAAGCA TGTCATTTAGTCCAGACAGGGTTCGCGTGAGGGGCAGATCTCCGGCGTTCAATGCACTCGCAGCAACATTTGAGAGCCAA AATGCAAGAAACCTGTCAACTCCTCCCCCAGTAGTTAGGAAACTCTACCCAAGATCTGTTACTCCTGACTCCTCAAAGTT TGCTCCCGCTCCCAAGTCTTCAGCCATCGCTTCTCGAAGTGCACTTTTCGAAAAAATACCTCCACAAGAACCTTCAATTC CAAAACCAGTCAAAGCGAGCCCGAAGACACCTGAGTCTCCAGCGCCAGAATCCAATTCAAAAGAACAAGAAGAGAAAAAG GAAAATGACAAGGAGGAGGGATCAATGAGCAGCCGGATAGAATCTCTTACGATTCAAGAAGATGCTAAAGAAGGAGTCGA AGACGAGGAAGATTTACCAGCTCACCCTTATGATCGTCTCAAGACAACTTCCACTGATCCTGTCTCTGACATTGATGTAA CAAGGAGAGAGGCTTACCTTTCATCAGAAGAGTTCAAGGAGAAATTTGGCATGACGAAAGAAGCTTTCTACAAGCTGCCT AAATGGAAACAGAACAAATTCAAAATGGCTGTTCAGCTTTTCTGA |
Microexon DNA seq | AAGTTCTCAAG |
Microexon Amino Acid seq | EVLK |
Microexon-tag DNA Seq | AAGGAACCCGAGCGTGACCCTCACTTGTTCTCTTGTACATTCACAAAAGAAGTTCTCAAGGTGACAGAGATATATAACTTTACACAGGATGACTTGATGACCGAAGAT |
Microexon-tag Amino Acid seq | KEPERDPHLFSCTFTKEVLKVTEIYNFTQDDLMTED |
Transcript ID | AT4G30160.1 |
Gene ID | At.20530 |
Gene Name | VLN4 |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >AT4G30160.1 MSVSMRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGT AAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVVAEEHITRLFVCRGKHVVHVKEVPFARS SLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGKLMADADSGEFWGFFGGFAPLPRK TANDEDKTYNSDITRLFCVEKGQANPVEGDTLKREMLDTNKCYILDCGIEVFVWMGRTTSLDDRKIASKAAEEMIRSSER PKSQMIRIIEGFETVPFRSKFESWTQETNTTVSEDGRGRVAALLQRQGVNVRGLMKAAPPKEEPQVFIDCTGNLQVWRVN GQAKTLLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERGSAVSMASKMVESMKFVPAQARIYEGKEPI QFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGVALFRIQGSGPENMQAIQVDPVAASLNSSYYYILHNDSSVFT WAGNLSTATDQELAERQLDLIKPNQQSRAQKEGSESEQFWELLGGKAEYSSQKLTKEPERDPHLFSCTFTKEVLKVTEIY NFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWD SSKSAMHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRGRSPAFNALAATFESQ NARNLSTPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEKIPPQEPSIPKPVKASPKTPESPAPESNSKEQEEKK ENDKEEGSMSSRIESLTIQEDAKEGVEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLP KWKQNKFKMAVQLF* |
CDS seq | >AT4G30160.1 ATGTCTGTTTCTATGAGAGATTTAGATCCAGCTTTCCAAGGAGCTGGACAGAAAGCTGGTATTGAGATATGGCGTATAGA GAATTTCATCCCTACCCCAATTCCAAAATCTTCTATTGGGAAGTTTTTCACCGGAGATTCTTACATAGTATTGAAGACAA CGGCGTTAAAAACTGGTGCATTGCGCCATGATATCCATTACTGGCTTGGTAAAGATACCTCTCAGGATGAAGCCGGTACT GCTGCAGTTAAGACAGTTGAATTAGATGCTGCTCTAGGAGGTCGTGCAGTGCAGTATCGGGAAGTTCAAGGCCACGAGAC TGAGAAATTCTTGTCTTATTTTAAGCCATGTATCATTCCTCAAGAAGGTGGAGTAGCATCAGGATTCAAGCATGTCGTAG CTGAAGAACATATTACCCGCTTGTTCGTCTGCAGAGGAAAACATGTTGTCCATGTCAAAGAGGTTCCTTTTGCTCGGAGT TCATTAAACCATGACGATATTTACATTCTTGACACAAAGTCCAAGATTTTCCAATTCAATGGATCCAATTCTAGTATCCA AGAGAGAGCAAAAGCACTGGAAGTGGTTCAGTACATCAAAGATACTTACCATGATGGGACATGTGAAGTTGCTACAGTTG AGGATGGGAAACTTATGGCTGATGCTGATAGTGGAGAATTTTGGGGTTTCTTTGGTGGGTTTGCTCCGCTACCTAGGAAA ACAGCTAATGATGAAGACAAAACTTATAATTCAGATATCACCAGATTATTTTGTGTCGAGAAGGGACAGGCAAATCCTGT TGAAGGCGATACATTGAAGAGGGAGATGCTGGATACAAACAAGTGTTACATTCTTGATTGTGGAATTGAAGTGTTTGTTT GGATGGGAAGAACCACTTCTCTTGATGATAGAAAAATTGCGAGTAAAGCAGCAGAAGAAATGATCCGTTCATCTGAACGA CCGAAATCGCAAATGATCCGCATAATAGAAGGGTTTGAAACAGTACCATTCCGATCAAAGTTTGAATCTTGGACTCAAGA AACTAATACAACCGTGTCAGAAGATGGTAGAGGCAGAGTTGCTGCTCTTTTGCAACGACAAGGAGTAAATGTCAGAGGCC TGATGAAAGCTGCTCCGCCTAAAGAAGAGCCTCAGGTTTTCATCGACTGCACGGGAAATCTGCAGGTTTGGCGTGTGAAT GGTCAGGCAAAGACTCTCCTTCAAGCTGCTGATCATTCAAAATTCTACAGTGGAGATTGCTATGTTTTCCAGTATTCTTA TCCCGGAGAAGAAAAAGAAGAAGTTCTTATAGGAACGTGGTTTGGCAAACAAAGTGTGGAGGAAGAAAGAGGTTCTGCAG TCTCTATGGCAAGCAAAATGGTTGAGTCAATGAAATTTGTCCCAGCCCAAGCTCGCATTTATGAAGGAAAGGAACCAATT CAATTCTTCGTGATTATGCAAAGCTTTATCGTTTTCAAGGGTGGTATTAGCAGTGGATACAAGAAATACATAGCCGAGAA AGAAGTTGATGATGATACATACAATGAGAATGGTGTTGCTCTATTCCGAATTCAAGGGTCTGGTCCGGAAAATATGCAAG CTATACAAGTTGACCCGGTTGCTGCATCACTGAACTCCTCGTACTATTACATACTACATAATGATTCTTCCGTCTTTACT TGGGCTGGAAATTTATCAACCGCAACTGACCAAGAACTGGCGGAAAGGCAGCTAGATCTGATTAAGCCAAATCAACAATC TAGAGCACAAAAGGAAGGTTCAGAATCAGAACAGTTCTGGGAGTTATTAGGAGGCAAAGCTGAATATTCGAGCCAAAAGC TCACAAAGGAACCCGAGCGTGACCCTCACTTGTTCTCTTGTACATTCACAAAAGAAGTTCTCAAGGTGACAGAGATATAT AACTTTACACAGGATGACTTGATGACCGAAGATATATTTATCATAGACTGTCACTCAGAAATCTTTGTCTGGGTTGGCCA AGAAGTAGTCCCAAAGAACAAGTTACTAGCTTTAACTATTGGAGAGAAATTCATCGAGAAAGATTCTCTCCTGGAGAAGT TATCCCCTGAAGCCCCTATTTATGTGATCATGGAAGGCGGTGAGCCGTCATTCTTCACCCGGTTCTTCACTTCTTGGGAT TCCTCAAAATCCGCTATGCATGGAAACTCATTCCAAAGAAAACTTAAAATTGTCAAAAATGGTGGAACTCCAGTGGCAGA TAAACCAAAACGAAGAACTCCAGCTTCATATGGTGGCCGTGCCAGCGTTCCTGACAAGTCGCAGCAGCGGTCAAGAAGCA TGTCATTTAGTCCAGACAGGGTTCGCGTGAGGGGCAGATCTCCGGCGTTCAATGCACTCGCAGCAACATTTGAGAGCCAA AATGCAAGAAACCTGTCAACTCCTCCCCCAGTAGTTAGGAAACTCTACCCAAGATCTGTTACTCCTGACTCCTCAAAGTT TGCTCCCGCTCCCAAGTCTTCAGCCATCGCTTCTCGAAGTGCACTTTTCGAAAAAATACCTCCACAAGAACCTTCAATTC CAAAACCAGTCAAAGCGAGCCCGAAGACACCTGAGTCTCCAGCGCCAGAATCCAATTCAAAAGAACAAGAAGAGAAAAAG GAAAATGACAAGGAGGAGGGATCAATGAGCAGCCGGATAGAATCTCTTACGATTCAAGAAGATGCTAAAGAAGGAGTCGA AGACGAGGAAGATTTACCAGCTCACCCTTATGATCGTCTCAAGACAACTTCCACTGATCCTGTCTCTGACATTGATGTAA CAAGGAGAGAGGCTTACCTTTCATCAGAAGAGTTCAAGGAGAAATTTGGCATGACGAAAGAAGCTTTCTACAAGCTGCCT AAATGGAAACAGAACAAATTCAAAATGGCTGTTCAGCTTTTCTGA |