
Microexon ID | At_3:21245803-21245813:- |
Species | Arabidopsis thaliana | Coordinates | 3:21245803..21245813 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAGTTTCAG |
Microexon Amino Acid seq | GKFQ |
Microexon-tag DNA Seq | TCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATTCACAACTTTGATCAAGATGACCTCTTGACGGAGGAA |
Microexon-tag Amino Acid Seq | SETVRDPHLFSFSFNRGKFQVEEIHNFDQDDLLTEE |
Microexon-tag spanning region | 21245681-21245986 |
Microexon-tag prediction score | 0.9522 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT3G57410.1x |
Reference Transcript ID | AT3G57410.1 |
Gene ID | AT3G57410 |
Gene Name | VLN3 |
Transcript ID | AT3G57410.1 |
Protein ID | AT3G57410.1 |
Gene ID | AT3G57410 |
Gene Name | VLN3 |
Pfam domain motif | Gelsolin |
Motif E-value | 0.00022 |
Motif start | 635 |
Motif end | 713 |
Protein seq | >AT3G57410.1 MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGT AAVKTVELDAALGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYTCKGKRAVHLKQVPFARS SLNHDDVFILDTKEKIYQFNGANSNIQERAKALVVIQYLKDKFHEGTSDVAIVDDGKLDTESDSGEFWVLFGGFAPIARK VASEDEIIPETTPPKLYSIADGQVESIDGDLSKSMLENNKCYLLDCGSEIFIWVGRVTQVEERKTAIQAAEDFVASENRP KATRITRVIQGYEPHSFKSNFDSWPSGSATPANEEGRGKVAALLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYID ANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQETAVRLASTMTNSLKGRPVQARIFEGKEP PQFVALFQHMVVLKGGLSSGYKNSMTEKGSSGETYTPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCFLLQSGTSMF LWVGNHSTHEQQELAAKVAEFLKPGTTIKHAKEGTESSSFWFALGGKQNFTSKKVSSETVRDPHLFSFSFNRGKFQVEEI HNFDQDDLLTEEMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGLSPKVPLYKITEGNEPCFFTTYFSWD STKATVQGNSYQKKAALLLGTHHVVEDQSSSGNQGPRQRAAALAALTSAFNSSSGRTSSPSRDRSNGSQGGPRQRAEALA ALTSAFNSSPSSKSPPRRSGLTSQASQRAAAVAALSQVLTAEKKKSPDTSPSAEAKDEKAFSEVEATEEATEAKEEEEVS PAAEASAEEAKPKQDDSEVETTGVTFTYERLQAKSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKK KFNLF* |
CDS seq | >AT3G57410.1 ATGTCTGGGTCAACAAAAGTATTGGATCCTGCGTTTCAAGGAGTGGGGCAGAAACCAGGTACTGAAATCTGGAGAATCGA AAATTTTGAGCCAGTCCCAGTACCAAAGTCTGAACATGGAAAGTTCTATATGGGAGATACCTACATTGTCTTGCAGACCA CACAGAATAAGGGTGGCGCTTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACA GCAGCTGTCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATATCGTGAAATTCAAGGTCATGAATC TGACAAATTCTTGTCTTACTTCAAGCCTTGCATTATACCACTAGAGGGTGGTGTTGCGTCTGGATTTAAAAAACCGGAGG AGGAGGAGTTTGAAACCCGGCTGTATACCTGCAAAGGAAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTCA TCTCTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGTGCAAATTCAAATATCCA AGAGAGAGCTAAAGCGTTGGTAGTCATTCAATATTTGAAAGACAAGTTTCATGAAGGAACTTCTGACGTTGCTATTGTTG ATGATGGAAAATTAGATACAGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGGTTTGCTCCAATAGCAAGGAAA GTTGCGAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGATGGTCAGGTGGAATCTAT AGACGGCGATTTGTCCAAATCTATGCTAGAAAACAATAAATGCTACCTTTTGGACTGCGGTTCTGAGATCTTTATCTGGG TTGGCCGAGTAACTCAAGTGGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCCA AAGGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGG CTCGGCAACTCCTGCTAATGAAGAAGGACGAGGAAAAGTCGCTGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCC TGTCAAAAAGCACACCAGTGAATGAGGATATTCCACCATTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGAT GCCAACTCCAAGACTGTTCTATCCAAAGATCATGTCGGAAAACTTTATTCTGGGGACTGCTATCTGGTCCTTTATACCTA CCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTGTTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAG CAGTTCGTCTAGCGAGCACAATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAGCCT CCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAAGGGCGGTTTGAGCTCTGGTTACAAAAATAGTATGACAGA GAAAGGTTCGTCAGGCGAAACCTACACGCCGGAATCAATTGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAATA AGGCTCTACAAGTTGAAGCGGTGGCAACTTCTTTGAACTCCTATGACTGCTTCCTTCTGCAATCGGGTACTTCCATGTTC CTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAGGAACTGGCTGCTAAAGTTGCTGAATTCTTAAAGCCTGGGACTAC TATCAAGCACGCAAAAGAGGGAACAGAGAGCTCATCCTTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGA AAGTTTCCTCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATT CACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATACTCATGCTGAAGTTTTTGTCTGGGTTGG TCAATGTGTGGACCCTAAGGAAAAACAAACTGCCTTTGAGATTGGCCAAAGATACATAAATCTGGCTGGTTCGCTGGAAG GCTTGTCTCCAAAAGTTCCATTATACAAAATCACTGAGGGAAATGAACCGTGCTTCTTCACCACTTATTTTTCATGGGAT TCTACTAAAGCTACTGTGCAAGGGAATTCCTACCAGAAGAAGGCAGCATTATTACTTGGTACACACCACGTTGTGGAGGA TCAGTCTAGCAGTGGGAACCAAGGACCAAGGCAAAGGGCTGCTGCTTTAGCTGCCTTGACTTCTGCCTTTAATTCTTCTT CTGGGAGAACAAGCTCTCCGAGCCGAGACAGATCAAATGGAAGTCAAGGGGGTCCAAGACAAAGGGCTGAAGCTTTAGCC GCCTTAACATCCGCATTCAATTCTTCACCATCATCAAAGTCACCTCCCCGAAGATCAGGATTGACAAGCCAGGCGTCACA AAGAGCAGCAGCAGTGGCTGCTCTTTCCCAAGTTCTCACTGCTGAGAAGAAGAAATCACCTGATACCAGCCCTTCTGCTG AAGCAAAAGATGAGAAAGCTTTCTCAGAAGTGGAGGCTACCGAAGAAGCTACTGAAGCCAAGGAAGAAGAGGAAGTGTCA CCTGCAGCAGAAGCGAGTGCTGAGGAAGCAAAACCAAAGCAGGATGATTCTGAAGTAGAAACAACTGGAGTAACTTTCAC CTACGAACGACTACAAGCCAAATCTGAGAAACCCGTGACAGGGATTGACTTCAAACGCAGAGAGGCTTACCTGTCTGAGG TAGAGTTCAAGACTGTATTTGGGATGGAGAAAGAATCATTCTACAAATTGCCTGGATGGAAACAAGACTTACTGAAGAAG AAATTCAACTTATTCTAA |
Microexon DNA seq | GAAAGTTTCAG |
Microexon Amino Acid seq | GKFQ |
Microexon-tag DNA Seq | TCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATTCACAACTTTGATCAAGATGACCTCTTGACGGAGGAA |
Microexon-tag Amino Acid seq | SETVRDPHLFSFSFNRGKFQVEEIHNFDQDDLLTEE |
Transcript ID | AT3G57410.6 |
Gene ID | At.16770 |
Gene Name | VLN3 |
Pfam domain motif | Gelsolin |
Motif E-value | 0.00018 |
Motif start | 635 |
Motif end | 713 |
Protein seq | >AT3G57410.6 MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGT AAVKTVELDAALGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYTCKGKRAVHLKQVPFARS SLNHDDVFILDTKEKIYQFNGANSNIQERAKALVVIQYLKDKFHEGTSDVAIVDDGKLDTESDSGEFWVLFGGFAPIARK VASEDEIIPETTPPKLYSIADGQVESIDGDLSKSMLENNKCYLLDCGSEIFIWVGRVTQVEERKTAIQAAEDFVASENRP KATRITRVIQGYEPHSFKSNFDSWPSGSATPANEEGRGKVAALLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYID ANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQETAVRLASTMTNSLKGRPVQARIFEGKEP PQFVALFQHMVVLKGGLSSGYKNSMTEKGSSGETYTPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCFLLQSGTSMF LWVGNHSTHEQQELAAKVAEFLKPGTTIKHAKEGTESSSFWFALGGKQNFTSKKVSSETVRDPHLFSFSFNRGKFQVEEI HNFDQDDLLTEEMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGLSPKVPLYKITEGNEPCFFTTYFSWD STKATVQGNSYQKKAALLLGTHHVVEDQSSSGNQGPRQRAAALAALTSAFNSSSGRTSSPEKKRLWDSFLGFPFMNLSEL RKPLSCNQIISQITATSVPCS* |
CDS seq | >AT3G57410.6 ATGTCTGGGTCAACAAAAGTATTGGATCCTGCGTTTCAAGGAGTGGGGCAGAAACCAGGTACTGAAATCTGGAGAATCGA AAATTTTGAGCCAGTCCCAGTACCAAAGTCTGAACATGGAAAGTTCTATATGGGAGATACCTACATTGTCTTGCAGACCA CACAGAATAAGGGTGGCGCTTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACA GCAGCTGTCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATATCGTGAAATTCAAGGTCATGAATC TGACAAATTCTTGTCTTACTTCAAGCCTTGCATTATACCACTAGAGGGTGGTGTTGCGTCTGGATTTAAAAAACCGGAGG AGGAGGAGTTTGAAACCCGGCTGTATACCTGCAAAGGAAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTCA TCTCTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGTGCAAATTCAAATATCCA AGAGAGAGCTAAAGCGTTGGTAGTCATTCAATATTTGAAAGACAAGTTTCATGAAGGAACTTCTGACGTTGCTATTGTTG ATGATGGAAAATTAGATACAGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGGTTTGCTCCAATAGCAAGGAAA GTTGCGAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGATGGTCAGGTGGAATCTAT AGACGGCGATTTGTCCAAATCTATGCTAGAAAACAATAAATGCTACCTTTTGGACTGCGGTTCTGAGATCTTTATCTGGG TTGGCCGAGTAACTCAAGTGGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCCA AAGGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGG CTCGGCAACTCCTGCTAATGAAGAAGGACGAGGAAAAGTCGCTGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCC TGTCAAAAAGCACACCAGTGAATGAGGATATTCCACCATTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGAT GCCAACTCCAAGACTGTTCTATCCAAAGATCATGTCGGAAAACTTTATTCTGGGGACTGCTATCTGGTCCTTTATACCTA CCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTGTTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAG CAGTTCGTCTAGCGAGCACAATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAGCCT CCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAAGGGCGGTTTGAGCTCTGGTTACAAAAATAGTATGACAGA GAAAGGTTCGTCAGGCGAAACCTACACGCCGGAATCAATTGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAATA AGGCTCTACAAGTTGAAGCGGTGGCAACTTCTTTGAACTCCTATGACTGCTTCCTTCTGCAATCGGGTACTTCCATGTTC CTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAGGAACTGGCTGCTAAAGTTGCTGAATTCTTAAAGCCTGGGACTAC TATCAAGCACGCAAAAGAGGGAACAGAGAGCTCATCCTTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGA AAGTTTCCTCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATT CACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATACTCATGCTGAAGTTTTTGTCTGGGTTGG TCAATGTGTGGACCCTAAGGAAAAACAAACTGCCTTTGAGATTGGCCAAAGATACATAAATCTGGCTGGTTCGCTGGAAG GCTTGTCTCCAAAAGTTCCATTATACAAAATCACTGAGGGAAATGAACCGTGCTTCTTCACCACTTATTTTTCATGGGAT TCTACTAAAGCTACTGTGCAAGGGAATTCCTACCAGAAGAAGGCAGCATTATTACTTGGTACACACCACGTTGTGGAGGA TCAGTCTAGCAGTGGGAACCAAGGACCAAGGCAAAGGGCTGCTGCTTTAGCTGCCTTGACTTCTGCCTTTAATTCTTCTT CTGGGAGAACAAGCTCTCCGGAAAAAAAAAGGCTCTGGGACTCATTTCTGGGGTTCCCATTCATGAATCTCTCAGAGTTA CGCAAACCTTTGAGTTGCAATCAAATAATTTCTCAAATCACAGCTACTAGTGTCCCATGTTCTTGA |