Microexon ID At_3:21245803-21245813:-
Species Arabidopsis thaliana
Coordinates 3:21245803..21245813
Microexon Cluster ID MEP27
Size 11
Phase 1
Pfam Domain Motif Gelsolin
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAGTTTCAG
Microexon Amino Acid seq GKFQ
Microexon-tag DNA Seq TCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATTCACAACTTTGATCAAGATGACCTCTTGACGGAGGAA
Microexon-tag Amino Acid Seq SETVRDPHLFSFSFNRGKFQVEEIHNFDQDDLLTEE
Microexon-tag spanning region21245681-21245986
Microexon-tag prediction score0.9522
Overlapped with the annotated transcript (%) 100
New Transcript ID AT3G57410.1x
Reference Transcript ID AT3G57410.1
Gene ID AT3G57410
Gene Name VLN3
Transcript ID AT3G57410.1
Protein ID AT3G57410.1
Gene ID AT3G57410
Gene Name VLN3
Pfam domain motif Gelsolin
Motif E-value 0.00022
Motif start 635
Motif end 713
Protein seq >AT3G57410.1
MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGT
AAVKTVELDAALGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYTCKGKRAVHLKQVPFARS
SLNHDDVFILDTKEKIYQFNGANSNIQERAKALVVIQYLKDKFHEGTSDVAIVDDGKLDTESDSGEFWVLFGGFAPIARK
VASEDEIIPETTPPKLYSIADGQVESIDGDLSKSMLENNKCYLLDCGSEIFIWVGRVTQVEERKTAIQAAEDFVASENRP
KATRITRVIQGYEPHSFKSNFDSWPSGSATPANEEGRGKVAALLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYID
ANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQETAVRLASTMTNSLKGRPVQARIFEGKEP
PQFVALFQHMVVLKGGLSSGYKNSMTEKGSSGETYTPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCFLLQSGTSMF
LWVGNHSTHEQQELAAKVAEFLKPGTTIKHAKEGTESSSFWFALGGKQNFTSKKVSSETVRDPHLFSFSFNRGKFQVEEI
HNFDQDDLLTEEMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGLSPKVPLYKITEGNEPCFFTTYFSWD
STKATVQGNSYQKKAALLLGTHHVVEDQSSSGNQGPRQRAAALAALTSAFNSSSGRTSSPSRDRSNGSQGGPRQRAEALA
ALTSAFNSSPSSKSPPRRSGLTSQASQRAAAVAALSQVLTAEKKKSPDTSPSAEAKDEKAFSEVEATEEATEAKEEEEVS
PAAEASAEEAKPKQDDSEVETTGVTFTYERLQAKSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKK
KFNLF*
CDS seq >AT3G57410.1
ATGTCTGGGTCAACAAAAGTATTGGATCCTGCGTTTCAAGGAGTGGGGCAGAAACCAGGTACTGAAATCTGGAGAATCGA
AAATTTTGAGCCAGTCCCAGTACCAAAGTCTGAACATGGAAAGTTCTATATGGGAGATACCTACATTGTCTTGCAGACCA
CACAGAATAAGGGTGGCGCTTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACA
GCAGCTGTCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATATCGTGAAATTCAAGGTCATGAATC
TGACAAATTCTTGTCTTACTTCAAGCCTTGCATTATACCACTAGAGGGTGGTGTTGCGTCTGGATTTAAAAAACCGGAGG
AGGAGGAGTTTGAAACCCGGCTGTATACCTGCAAAGGAAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTCA
TCTCTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGTGCAAATTCAAATATCCA
AGAGAGAGCTAAAGCGTTGGTAGTCATTCAATATTTGAAAGACAAGTTTCATGAAGGAACTTCTGACGTTGCTATTGTTG
ATGATGGAAAATTAGATACAGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGGTTTGCTCCAATAGCAAGGAAA
GTTGCGAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGATGGTCAGGTGGAATCTAT
AGACGGCGATTTGTCCAAATCTATGCTAGAAAACAATAAATGCTACCTTTTGGACTGCGGTTCTGAGATCTTTATCTGGG
TTGGCCGAGTAACTCAAGTGGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCCA
AAGGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGG
CTCGGCAACTCCTGCTAATGAAGAAGGACGAGGAAAAGTCGCTGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCC
TGTCAAAAAGCACACCAGTGAATGAGGATATTCCACCATTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGAT
GCCAACTCCAAGACTGTTCTATCCAAAGATCATGTCGGAAAACTTTATTCTGGGGACTGCTATCTGGTCCTTTATACCTA
CCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTGTTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAG
CAGTTCGTCTAGCGAGCACAATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAGCCT
CCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAAGGGCGGTTTGAGCTCTGGTTACAAAAATAGTATGACAGA
GAAAGGTTCGTCAGGCGAAACCTACACGCCGGAATCAATTGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAATA
AGGCTCTACAAGTTGAAGCGGTGGCAACTTCTTTGAACTCCTATGACTGCTTCCTTCTGCAATCGGGTACTTCCATGTTC
CTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAGGAACTGGCTGCTAAAGTTGCTGAATTCTTAAAGCCTGGGACTAC
TATCAAGCACGCAAAAGAGGGAACAGAGAGCTCATCCTTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGA
AAGTTTCCTCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATT
CACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATACTCATGCTGAAGTTTTTGTCTGGGTTGG
TCAATGTGTGGACCCTAAGGAAAAACAAACTGCCTTTGAGATTGGCCAAAGATACATAAATCTGGCTGGTTCGCTGGAAG
GCTTGTCTCCAAAAGTTCCATTATACAAAATCACTGAGGGAAATGAACCGTGCTTCTTCACCACTTATTTTTCATGGGAT
TCTACTAAAGCTACTGTGCAAGGGAATTCCTACCAGAAGAAGGCAGCATTATTACTTGGTACACACCACGTTGTGGAGGA
TCAGTCTAGCAGTGGGAACCAAGGACCAAGGCAAAGGGCTGCTGCTTTAGCTGCCTTGACTTCTGCCTTTAATTCTTCTT
CTGGGAGAACAAGCTCTCCGAGCCGAGACAGATCAAATGGAAGTCAAGGGGGTCCAAGACAAAGGGCTGAAGCTTTAGCC
GCCTTAACATCCGCATTCAATTCTTCACCATCATCAAAGTCACCTCCCCGAAGATCAGGATTGACAAGCCAGGCGTCACA
AAGAGCAGCAGCAGTGGCTGCTCTTTCCCAAGTTCTCACTGCTGAGAAGAAGAAATCACCTGATACCAGCCCTTCTGCTG
AAGCAAAAGATGAGAAAGCTTTCTCAGAAGTGGAGGCTACCGAAGAAGCTACTGAAGCCAAGGAAGAAGAGGAAGTGTCA
CCTGCAGCAGAAGCGAGTGCTGAGGAAGCAAAACCAAAGCAGGATGATTCTGAAGTAGAAACAACTGGAGTAACTTTCAC
CTACGAACGACTACAAGCCAAATCTGAGAAACCCGTGACAGGGATTGACTTCAAACGCAGAGAGGCTTACCTGTCTGAGG
TAGAGTTCAAGACTGTATTTGGGATGGAGAAAGAATCATTCTACAAATTGCCTGGATGGAAACAAGACTTACTGAAGAAG
AAATTCAACTTATTCTAA
Microexon DNA seq GAAAGTTTCAG
Microexon Amino Acid seq GKFQ
Microexon-tag DNA Seq TCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATTCACAACTTTGATCAAGATGACCTCTTGACGGAGGAA
Microexon-tag Amino Acid seq SETVRDPHLFSFSFNRGKFQVEEIHNFDQDDLLTEE
Transcript ID AT3G57410.6
Gene ID At.16770
Gene Name VLN3
Pfam domain motif Gelsolin
Motif E-value 0.00018
Motif start 635
Motif end 713
Protein seq >AT3G57410.6
MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGT
AAVKTVELDAALGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYTCKGKRAVHLKQVPFARS
SLNHDDVFILDTKEKIYQFNGANSNIQERAKALVVIQYLKDKFHEGTSDVAIVDDGKLDTESDSGEFWVLFGGFAPIARK
VASEDEIIPETTPPKLYSIADGQVESIDGDLSKSMLENNKCYLLDCGSEIFIWVGRVTQVEERKTAIQAAEDFVASENRP
KATRITRVIQGYEPHSFKSNFDSWPSGSATPANEEGRGKVAALLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYID
ANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQETAVRLASTMTNSLKGRPVQARIFEGKEP
PQFVALFQHMVVLKGGLSSGYKNSMTEKGSSGETYTPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCFLLQSGTSMF
LWVGNHSTHEQQELAAKVAEFLKPGTTIKHAKEGTESSSFWFALGGKQNFTSKKVSSETVRDPHLFSFSFNRGKFQVEEI
HNFDQDDLLTEEMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGLSPKVPLYKITEGNEPCFFTTYFSWD
STKATVQGNSYQKKAALLLGTHHVVEDQSSSGNQGPRQRAAALAALTSAFNSSSGRTSSPEKKRLWDSFLGFPFMNLSEL
RKPLSCNQIISQITATSVPCS*
CDS seq >AT3G57410.6
ATGTCTGGGTCAACAAAAGTATTGGATCCTGCGTTTCAAGGAGTGGGGCAGAAACCAGGTACTGAAATCTGGAGAATCGA
AAATTTTGAGCCAGTCCCAGTACCAAAGTCTGAACATGGAAAGTTCTATATGGGAGATACCTACATTGTCTTGCAGACCA
CACAGAATAAGGGTGGCGCTTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACA
GCAGCTGTCAAGACAGTTGAACTTGATGCAGCTCTTGGAGGCCGAGCTGTCCAATATCGTGAAATTCAAGGTCATGAATC
TGACAAATTCTTGTCTTACTTCAAGCCTTGCATTATACCACTAGAGGGTGGTGTTGCGTCTGGATTTAAAAAACCGGAGG
AGGAGGAGTTTGAAACCCGGCTGTATACCTGCAAAGGAAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCACGCTCA
TCTCTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGTGCAAATTCAAATATCCA
AGAGAGAGCTAAAGCGTTGGTAGTCATTCAATATTTGAAAGACAAGTTTCATGAAGGAACTTCTGACGTTGCTATTGTTG
ATGATGGAAAATTAGATACAGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGGTTTGCTCCAATAGCAAGGAAA
GTTGCGAGTGAGGATGAAATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGATGGTCAGGTGGAATCTAT
AGACGGCGATTTGTCCAAATCTATGCTAGAAAACAATAAATGCTACCTTTTGGACTGCGGTTCTGAGATCTTTATCTGGG
TTGGCCGAGTAACTCAAGTGGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGATTTTGTTGCTAGTGAAAATAGGCCA
AAGGCAACACGCATAACCCGTGTTATTCAAGGTTATGAGCCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGG
CTCGGCAACTCCTGCTAATGAAGAAGGACGAGGAAAAGTCGCTGCATTACTTAAGCAACAAGGTGTTGGGTTAAAGGGCC
TGTCAAAAAGCACACCAGTGAATGAGGATATTCCACCATTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGAT
GCCAACTCCAAGACTGTTCTATCCAAAGATCATGTCGGAAAACTTTATTCTGGGGACTGCTATCTGGTCCTTTATACCTA
CCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTGTTGGTTTGGAAAGAATAGTAATCAGGAGGATCAAGAAACAG
CAGTTCGTCTAGCGAGCACAATGACAAATTCGTTGAAGGGAAGACCAGTGCAGGCCCGTATATTTGAGGGTAAAGAGCCT
CCACAATTTGTTGCACTTTTTCAACATATGGTTGTCCTTAAGGGCGGTTTGAGCTCTGGTTACAAAAATAGTATGACAGA
GAAAGGTTCGTCAGGCGAAACCTACACGCCGGAATCAATTGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAATA
AGGCTCTACAAGTTGAAGCGGTGGCAACTTCTTTGAACTCCTATGACTGCTTCCTTCTGCAATCGGGTACTTCCATGTTC
CTTTGGGTTGGAAACCATAGTACGCATGAGCAGCAGGAACTGGCTGCTAAAGTTGCTGAATTCTTAAAGCCTGGGACTAC
TATCAAGCACGCAAAAGAGGGAACAGAGAGCTCATCCTTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGA
AAGTTTCCTCTGAGACTGTCAGGGATCCTCACTTGTTCTCCTTTTCCTTCAACAGAGGAAAGTTTCAGGTTGAAGAGATT
CACAACTTTGATCAAGATGACCTCTTGACGGAGGAAATGCATTTACTAGATACTCATGCTGAAGTTTTTGTCTGGGTTGG
TCAATGTGTGGACCCTAAGGAAAAACAAACTGCCTTTGAGATTGGCCAAAGATACATAAATCTGGCTGGTTCGCTGGAAG
GCTTGTCTCCAAAAGTTCCATTATACAAAATCACTGAGGGAAATGAACCGTGCTTCTTCACCACTTATTTTTCATGGGAT
TCTACTAAAGCTACTGTGCAAGGGAATTCCTACCAGAAGAAGGCAGCATTATTACTTGGTACACACCACGTTGTGGAGGA
TCAGTCTAGCAGTGGGAACCAAGGACCAAGGCAAAGGGCTGCTGCTTTAGCTGCCTTGACTTCTGCCTTTAATTCTTCTT
CTGGGAGAACAAGCTCTCCGGAAAAAAAAAGGCTCTGGGACTCATTTCTGGGGTTCCCATTCATGAATCTCTCAGAGTTA
CGCAAACCTTTGAGTTGCAATCAAATAATTTCTCAAATCACAGCTACTAGTGTCCCATGTTCTTGA