
Microexon ID | At_2:17413035-17413045:- |
Species | Arabidopsis thaliana | Coordinates | 2:17413035..17413045 |
Microexon Cluster ID | MEP27 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | Gelsolin |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | MRRGADRYTGWMAGWGATCCYCAYYTGTTYDCWTKYWCWTTYWMTAAAGGRAADYTKRAGGTKRMRGARRTHTACAAYTTYWCYCARGATGAYYTGWTGACWGARGAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAGTTTCAG |
Microexon Amino Acid seq | GKFQ |
Microexon-tag DNA Seq | TCTGAGACGATCAGGGATCCTCACTTATTCTCATTTGCTTTCAACAGAGGAAAGTTTCAGGTTGAGGAGATTTACAACTTTGCTCAAGATGACCTCTTGACTGAGGAT |
Microexon-tag Amino Acid Seq | SETIRDPHLFSFAFNRGKFQVEEIYNFAQDDLLTED |
Microexon-tag spanning region | 17412910-17413217 |
Microexon-tag prediction score | 0.9542 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G41740.1x |
Reference Transcript ID | AT2G41740.1 |
Gene ID | AT2G41740 |
Gene Name | VLN2 |
Transcript ID | AT2G41740.1 |
Protein ID | AT2G41740.1 |
Gene ID | AT2G41740 |
Gene Name | VLN2 |
Pfam domain motif | Gelsolin |
Motif E-value | 0.00012 |
Motif start | 634 |
Motif end | 710 |
Protein seq | >AT2G41740.1 MSTKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAA VKTVELDAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTVEEEVFETRLYTCKGKRAIRLKQVPFARSSL NHDDVFILDTEEKIYQFNGANSNIQERAKALEVVQYLKDKYHEGTCDVAIVDDGKLDTESDSGAFWVLFGGFAPIGRKVA NDDDIVPESTPPKLYCITDGKMEPIDGDLSKSMLENTKCYLLDCGAEIYIWVGRVTQVDERKAASQSAEEFLASENRPKA THVTRVIQGYESHSFKSNFDSWPSGSATPGNEEGRGKVAALLKQQGVGLKGIAKSAPVNEDIPPLLESGGKLEVWYVNGK VKTPLPKEDIGKLYSGDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQDTAIRLANTMSNSLKGRPVQGRIYEGKEPPQ FVALFQPMVVLKGGLSSGYKSSMGESESTDETYTPESIALVQVSGTGVHNNKAVQVETVATSLNSYECFLLQSGTSMFLW HGNQSTHEQLELATKVAEFLKPGITLKHAKEGTESSTFWFALGGKQNFTSKKASSETIRDPHLFSFAFNRGKFQVEEIYN FAQDDLLTEDIYFLDTHAEVFVWVGQCVEPKEKQTVFEIGQKYIDLAGSLEGLHPKVPIYKINEGNEPCFFTTYFSWDAT KAIVQGNSFQKKASLLFGTHHVVEDKSNGGNQGLRQRAEALAALNSAFNSSSNRPAYSSQDRLNESHDGPRQRAEALAAL SSAFNSSSSSTKSPPPPRPVGTSQASQRAAAVAALSQVLVAENKKSPDTSPTRRSTSSNPADDIPLTEAKDEEEASEVAG LEAKEEEEVSPAADETEAKQETEEQGDSEIQPSGATFTYEQLRAKSENPVTGIDFKRREAYLSEEEFQSVFGIEKEAFNN LPRWKQDLLKKKFDLF* |
CDS seq | >AT2G41740.1 ATGTCAACAAAAGTGTTGGATCCTGCATTTCAAGGAGCTGGCCAGAAACCAGGGACTGAAATCTGGAGAATTGAGAATTT TGAGGCAGTTCCTGTACCAAAGTCTGAGCATGGAAAGTTCTATATGGGAGATACTTACATTGTCTTGCAGACAACACAGA ATAAAGGGGGTGCTTATTTGTTTGATATACATTTCTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACAGCAGCT GTTAAAACAGTTGAACTCGATGCAGTTCTTGGAGGCCGTGCTGTCCAACACCGGGAAATTCAGGGTCATGAATCTGACAA ATTCTTGTCTTACTTCAAGCCATGTATTATACCCTTAGAGGGTGGTGTTGCGTCTGGTTTCAAAACAGTTGAAGAAGAGG TGTTTGAGACCCGGTTATATACTTGCAAAGGAAAACGTGCAATCCGTTTGAAGCAGGTTCCTTTTGCCCGCTCATCACTG AATCATGATGATGTATTTATCTTGGACACCGAGGAAAAGATCTATCAGTTCAATGGTGCAAATTCAAACATTCAGGAGAG AGCCAAAGCTTTGGAAGTCGTTCAGTATTTAAAAGACAAGTATCACGAAGGAACTTGTGATGTTGCGATTGTTGATGACG GAAAATTAGATACAGAATCAGATTCTGGTGCATTTTGGGTCCTCTTTGGTGGTTTTGCTCCAATCGGAAGGAAAGTTGCC AATGATGATGACATTGTCCCGGAGTCAACTCCACCTAAGCTTTATTGCATCACTGATGGTAAGATGGAACCAATAGACGG TGACCTATCCAAATCTATGCTGGAAAACACTAAATGCTACCTCTTGGACTGTGGCGCTGAGATATATATCTGGGTTGGCC GTGTCACTCAAGTAGATGAGAGGAAAGCTGCTAGTCAATCTGCTGAGGAATTCCTTGCTAGTGAAAATAGGCCAAAGGCA ACACATGTAACTCGTGTAATCCAAGGTTATGAGTCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGGCTCGGC CACTCCTGGTAACGAAGAAGGACGAGGAAAAGTCGCTGCTTTACTGAAGCAACAAGGCGTTGGGCTCAAGGGCATTGCAA AAAGTGCACCAGTGAATGAGGATATTCCACCTCTGCTTGAAAGTGGTGGAAAATTGGAGGTTTGGTACGTTAATGGTAAA GTCAAGACTCCCTTACCTAAAGAAGATATTGGAAAGCTCTATTCTGGGGACTGCTATTTGGTCCTTTATACCTATCATTC TGGGGAAAGGAAAGACGAATATTTCTTGAGTTGTTGGTTTGGAAAGAAAAGCATTCCGGAGGACCAAGATACAGCAATTC GACTGGCGAATACAATGTCAAACTCGTTAAAAGGAAGACCTGTGCAGGGCCGTATATACGAGGGTAAAGAGCCTCCACAA TTTGTTGCCCTTTTTCAACCTATGGTGGTCTTAAAGGGTGGTTTGAGCTCTGGGTACAAAAGCAGTATGGGAGAGTCAGA GTCAACAGACGAAACCTACACGCCAGAATCAATTGCACTAGTTCAAGTATCTGGAACCGGAGTTCACAATAATAAGGCTG TGCAAGTTGAAACGGTGGCAACATCTTTGAACTCTTATGAGTGCTTCCTTCTGCAATCTGGTACTTCCATGTTCCTTTGG CATGGAAATCAAAGTACGCATGAACAGCTAGAACTGGCCACTAAAGTTGCTGAATTCTTGAAGCCCGGGATTACTCTCAA GCATGCCAAAGAAGGAACAGAGAGCTCAACCTTTTGGTTTGCACTTGGGGGAAAACAGAATTTCACCAGCAAGAAGGCTT CCTCTGAGACGATCAGGGATCCTCACTTATTCTCATTTGCTTTCAACAGAGGAAAGTTTCAGGTTGAGGAGATTTACAAC TTTGCTCAAGATGACCTCTTGACTGAGGATATATATTTCCTAGACACCCATGCTGAAGTTTTTGTCTGGGTTGGTCAATG TGTGGAGCCTAAGGAAAAGCAAACTGTATTTGAGATTGGCCAAAAATACATAGATCTTGCTGGATCCTTGGAAGGCTTGC ATCCTAAAGTCCCAATCTACAAAATCAATGAAGGGAACGAACCATGCTTCTTCACCACTTACTTTTCTTGGGATGCCACT AAAGCTATCGTACAAGGAAATTCATTCCAGAAAAAGGCATCGTTGTTATTTGGCACTCACCACGTTGTGGAGGATAAGTC TAACGGTGGGAACCAAGGACTAAGGCAAAGGGCTGAAGCACTAGCTGCCTTAAATTCGGCATTTAACTCTTCTAGTAACA GGCCTGCCTATTCGAGCCAGGACAGATTAAACGAAAGTCACGACGGCCCAAGACAGAGAGCTGAAGCTTTAGCCGCCTTG TCATCCGCATTCAACTCTTCTTCGTCATCAACTAAATCGCCTCCACCACCAAGGCCAGTGGGGACGAGTCAGGCTTCACA GAGAGCAGCAGCAGTGGCTGCTCTTTCTCAAGTTCTTGTTGCGGAAAATAAGAAATCACCTGATACCTCTCCTACAAGAA GATCCACTAGCTCCAACCCAGCAGATGACATCCCTCTGACGGAAGCAAAAGATGAAGAAGAGGCTTCAGAGGTAGCTGGT CTTGAAGCCAAGGAAGAAGAGGAAGTTTCACCTGCAGCAGATGAAACAGAAGCAAAGCAGGAAACAGAAGAGCAAGGTGA TTCTGAAATACAACCAAGTGGAGCAACTTTCACCTATGAACAGCTGAGAGCTAAATCTGAGAACCCAGTGACTGGAATCG ATTTCAAACGCAGAGAGGCTTATCTATCTGAGGAAGAGTTCCAAAGTGTGTTTGGGATCGAGAAAGAAGCATTCAACAAC TTACCACGTTGGAAGCAAGATCTGCTTAAGAAGAAGTTCGACTTGTTCTAG |
Microexon DNA seq | GAAAGTTTCAG |
Microexon Amino Acid seq | GKFQ |
Microexon-tag DNA Seq | TCTGAGACGATCAGGGATCCTCACTTATTCTCATTTGCTTTCAACAGAGGAAAGTTTCAGGTTGAGGAGATTTACAACTTTGCTCAAGATGACCTCTTGACTGAGGAT |
Microexon-tag Amino Acid seq | SETIRDPHLFSFAFNRGKFQVEEIYNFAQDDLLTED |
Transcript ID | At.11154.1 |
Gene ID | At.11154 |
Gene Name | VLN2 |
Pfam domain motif | Gelsolin |
Motif E-value | 0.00011 |
Motif start | 634 |
Motif end | 710 |
Protein seq | >At.11154.1 MSTKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAA VKTVELDAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTVEEEVFETRLYTCKGKRAIRLKQVPFARSSL NHDDVFILDTEEKIYQFNGANSNIQERAKALEVVQYLKDKYHEGTCDVAIVDDGKLDTESDSGAFWVLFGGFAPIGRKVA NDDDIVPESTPPKLYCITDGKMEPIDGDLSKSMLENTKCYLLDCGAEIYIWVGRVTQVDERKAASQSAEEFLASENRPKA THVTRVIQGYESHSFKSNFDSWPSGSATPGNEEGRGKVAALLKQQGVGLKGIAKSAPVNEDIPPLLESGGKLEVWYVNGK VKTPLPKEDIGKLYSGDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQDTAIRLANTMSNSLKGRPVQGRIYEGKEPPQ FVALFQPMVVLKGGLSSGYKSSMGESESTDETYTPESIALVQVSGTGVHNNKAVQVETVATSLNSYECFLLQSGTSMFLW HGNQSTHEQLELATKVAEFLKPGITLKHAKEGTESSTFWFALGGKQNFTSKKASSETIRDPHLFSFAFNRGKFQVEEIYN FAQDDLLTEDIYFLDTHAEVFVWVGQCVEPKEKQTVFEIGQKYIDLAGSLEGLHPKVPIYKINEGNEPCFFTTYFSWDAT KAIVQGNSFQKKASLLFGTHHVVEDKSNGGNQGLRQRAEALAALNSAFNSSSNRPAYSSQDRLNESHDGPRQRAEALAAL SSAFNSSSSSTKSPPPPRPVGTSQASQRAAAVAALSQVLVAENKKSPDTSPTRRSTSSNPADDIPLTEAKDEEEASEVAG LEAKEEEEVSPAADETEAKQETEEQGDSEIQPSGATFTYEQLRAKSENPVTGIDFKRREVN* |
CDS seq | >At.11154.1 ATGTCAACAAAAGTGTTGGATCCTGCATTTCAAGGAGCTGGCCAGAAACCAGGGACTGAAATCTGGAGAATTGAGAATTT TGAGGCAGTTCCTGTACCAAAGTCTGAGCATGGAAAGTTCTATATGGGAGATACTTACATTGTCTTGCAGACAACACAGA ATAAAGGGGGTGCTTATTTGTTTGATATACATTTCTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACAGCAGCT GTTAAAACAGTTGAACTCGATGCAGTTCTTGGAGGCCGTGCTGTCCAACACCGGGAAATTCAGGGTCATGAATCTGACAA ATTCTTGTCTTACTTCAAGCCATGTATTATACCCTTAGAGGGTGGTGTTGCGTCTGGTTTCAAAACAGTTGAAGAAGAGG TGTTTGAGACCCGGTTATATACTTGCAAAGGAAAACGTGCAATCCGTTTGAAGCAGGTTCCTTTTGCCCGCTCATCACTG AATCATGATGATGTATTTATCTTGGACACCGAGGAAAAGATCTATCAGTTCAATGGTGCAAATTCAAACATTCAGGAGAG AGCCAAAGCTTTGGAAGTCGTTCAGTATTTAAAAGACAAGTATCACGAAGGAACTTGTGATGTTGCGATTGTTGATGACG GAAAATTAGATACAGAATCAGATTCTGGTGCATTTTGGGTCCTCTTTGGTGGTTTTGCTCCAATCGGAAGGAAAGTTGCC AATGATGATGACATTGTCCCGGAGTCAACTCCACCTAAGCTTTATTGCATCACTGATGGTAAGATGGAACCAATAGACGG TGACCTATCCAAATCTATGCTGGAAAACACTAAATGCTACCTCTTGGACTGTGGCGCTGAGATATATATCTGGGTTGGCC GTGTCACTCAAGTAGATGAGAGGAAAGCTGCTAGTCAATCTGCTGAGGAATTCCTTGCTAGTGAAAATAGGCCAAAGGCA ACACATGTAACTCGTGTAATCCAAGGTTATGAGTCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGGCTCGGC CACTCCTGGTAACGAAGAAGGACGAGGAAAAGTCGCTGCTTTACTGAAGCAACAAGGCGTTGGGCTCAAGGGCATTGCAA AAAGTGCACCAGTGAATGAGGATATTCCACCTCTGCTTGAAAGTGGTGGAAAATTGGAGGTTTGGTACGTTAATGGTAAA GTCAAGACTCCCTTACCTAAAGAAGATATTGGAAAGCTCTATTCTGGGGACTGCTATTTGGTCCTTTATACCTATCATTC TGGGGAAAGGAAAGACGAATATTTCTTGAGTTGTTGGTTTGGAAAGAAAAGCATTCCGGAGGACCAAGATACAGCAATTC GACTGGCGAATACAATGTCAAACTCGTTAAAAGGAAGACCTGTGCAGGGCCGTATATACGAGGGTAAAGAGCCTCCACAA TTTGTTGCCCTTTTTCAACCTATGGTGGTCTTAAAGGGTGGTTTGAGCTCTGGGTACAAAAGCAGTATGGGAGAGTCAGA GTCAACAGACGAAACCTACACGCCAGAATCAATTGCACTAGTTCAAGTATCTGGAACCGGAGTTCACAATAATAAGGCTG TGCAAGTTGAAACGGTGGCAACATCTTTGAACTCTTATGAGTGCTTCCTTCTGCAATCTGGTACTTCCATGTTCCTTTGG CATGGAAATCAAAGTACGCATGAACAGCTAGAACTGGCCACTAAAGTTGCTGAATTCTTGAAGCCCGGGATTACTCTCAA GCATGCCAAAGAAGGAACAGAGAGCTCAACCTTTTGGTTTGCACTTGGGGGAAAACAGAATTTCACCAGCAAGAAGGCTT CCTCTGAGACGATCAGGGATCCTCACTTATTCTCATTTGCTTTCAACAGAGGAAAGTTTCAGGTTGAGGAGATTTACAAC TTTGCTCAAGATGACCTCTTGACTGAGGATATATATTTCCTAGACACCCATGCTGAAGTTTTTGTCTGGGTTGGTCAATG TGTGGAGCCTAAGGAAAAGCAAACTGTATTTGAGATTGGCCAAAAATACATAGATCTTGCTGGATCCTTGGAAGGCTTGC ATCCTAAAGTCCCAATCTACAAAATCAATGAAGGGAACGAACCATGCTTCTTCACCACTTACTTTTCTTGGGATGCCACT AAAGCTATCGTACAAGGAAATTCATTCCAGAAAAAGGCATCGTTGTTATTTGGCACTCACCACGTTGTGGAGGATAAGTC TAACGGTGGGAACCAAGGACTAAGGCAAAGGGCTGAAGCACTAGCTGCCTTAAATTCGGCATTTAACTCTTCTAGTAACA GGCCTGCCTATTCGAGCCAGGACAGATTAAACGAAAGTCACGACGGCCCAAGACAGAGAGCTGAAGCTTTAGCCGCCTTG TCATCCGCATTCAACTCTTCTTCGTCATCAACTAAATCGCCTCCACCACCAAGGCCAGTGGGGACGAGTCAGGCTTCACA GAGAGCAGCAGCAGTGGCTGCTCTTTCTCAAGTTCTTGTTGCGGAAAATAAGAAATCACCTGATACCTCTCCTACAAGAA GATCCACTAGCTCCAACCCAGCAGATGACATCCCTCTGACGGAAGCAAAAGATGAAGAAGAGGCTTCAGAGGTAGCTGGT CTTGAAGCCAAGGAAGAAGAGGAAGTTTCACCTGCAGCAGATGAAACAGAAGCAAAGCAGGAAACAGAAGAGCAAGGTGA TTCTGAAATACAACCAAGTGGAGCAACTTTCACCTATGAACAGCTGAGAGCTAAATCTGAGAACCCAGTGACTGGAATCG ATTTCAAACGCAGAGAGGTGAATTAG |