
Microexon ID | Vv_11:2021619-2021629:- |
Species | Vistis vinifera | Coordinates | 11:2021619..2021629 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | AGTGATAAGACCAGCGCCGATTATTACTTCGACTCCTATTCTCACTTCGGTATTCATGAAGAAATGTTGAAGGATGTTGTGAGAACTAAGACCTATCAAAATGTCATT |
Microexon-tag Amino Acid Seq | SDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Microexon-tag spanning region | 2020695-2022113 |
Microexon-tag prediction score | 0.9881 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_11s0016g02530.t01x |
Reference Transcript ID | VIT_11s0016g02530.t01 |
Gene ID | VIT_11s0016g02530 |
Gene Name | NA |
Transcript ID | VIT_11s0016g02530.t01 |
Protein ID | VIT_11s0016g02530.t01 |
Gene ID | VIT_11s0016g02530 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 0.0041 |
Motif start | 44 |
Motif end | 146 |
Protein seq | >VIT_11s0016g02530.t01 MCEPGESDKDIARSFELDDSVIGSDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVIYKNKFLFKNKVVLDVGAGTGI LSLFCAKAGAKHVYAVECSHMADMAKEIVEVNGFSDVITVMKGKVEEIVLPVAQVDIIISEWMGYFLLFENMLNTVLYAR DKWLVNDGIVLPDKASLYLTAIEDAEYKEDKIEFWNSVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMA PGDASFTAPFKLVASRDDYIHALVAYFDVSFTKCHKLTGFSTGPRSRATHWKQTVLYLEDVLTICEGETVVGSMTVAQNK KNPRDVDIMIKYSFNGQRCQVSRTQYYKMR* |
CDS seq | >VIT_11s0016g02530.t01 ATGTGCGAGCCTGGCGAGTCTGATAAAGACATTGCACGATCTTTCGAGCTCGACGACTCCGTCATTGGCAGTGATAAGAC CAGCGCCGATTATTACTTCGACTCCTATTCTCACTTCGGTATTCATGAAGAAATGTTGAAGGATGTTGTGAGAACTAAGA CCTATCAAAATGTCATTTATAAGAATAAGTTTCTGTTCAAGAACAAAGTAGTCCTTGATGTGGGAGCAGGGACTGGAATT CTGTCCCTCTTTTGTGCAAAGGCAGGGGCAAAACATGTTTATGCGGTTGAGTGTTCCCATATGGCTGACATGGCAAAAGA GATTGTTGAAGTAAATGGATTTTCTGATGTTATAACAGTTATGAAAGGAAAGGTTGAAGAAATTGTTCTTCCTGTTGCTC AAGTGGATATCATTATATCAGAATGGATGGGCTACTTTTTGTTGTTTGAGAATATGTTAAATACAGTCCTATATGCTCGT GATAAATGGCTTGTGAATGATGGTATTGTGCTGCCAGACAAAGCATCTCTCTATTTGACAGCCATTGAGGATGCGGAGTA CAAAGAAGACAAGATTGAATTTTGGAACAGTGTGTATGGCTTTGACATGAGCTGTATCAAGAAGCAAGCAATGATGGAAC CACTTGTGGACACAGTTGATCAGAATCAGATCGTCACAAACTGCCAGTTACTCAAGACTATGGACATCTCTAAAATGGCT CCTGGGGATGCTTCCTTCACAGCTCCTTTTAAGCTTGTGGCATCACGCGATGATTACATCCATGCTCTTGTAGCATATTT TGATGTATCATTTACCAAGTGTCATAAATTGACAGGCTTCTCCACAGGGCCAAGATCACGGGCTACACATTGGAAACAAA CAGTCCTGTATCTGGAAGATGTGCTAACCATATGCGAAGGGGAGACAGTTGTTGGGAGCATGACAGTGGCCCAGAACAAG AAGAATCCTCGTGACGTTGATATAATGATCAAATATTCCTTCAATGGTCAGCGTTGCCAGGTCTCAAGAACTCAATATTA CAAGATGCGTTAG |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | AGTGATAAGACCAGCGCCGATTATTACTTCGACTCCTATTCTCACTTCGGTATTCATGAAGAAATGTTGAAGGATGTTGTGAGAACTAAGACCTATCAAAATGTCATT |
Microexon-tag Amino Acid seq | SDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Transcript ID | Vv.3356.1 |
Gene ID | Vv.3356 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 0.0025 |
Motif start | 100 |
Motif end | 202 |
Protein seq | >Vv.3356.1 MARRESHSHHPHHHQGTHTRFEDEQIEEATESSNLEDPMCDADESTIGQDKAIDDTMCEPGESDKDIARSFELDDSVIGS DKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVIYKNKFLFKNKVVLDVGAGTGILSLFCAKAGAKHVYAVECSHMADM AKEIVEVNGFSDVITVMKGKVEEIVLPVAQVDIIISEWMGYFLLFENMLNTVLYARDKWLVNDGIVLPDKASLYLTAIED AEYKEDKIECEPIEIFKIHLSRIFFSFCLCFYVWER* |
CDS seq | >Vv.3356.1 ATGGCTCGACGAGAGTCCCACAGCCACCACCCCCACCACCACCAAGGCACGCACACCAGATTCGAGGACGAACAGATCGA AGAAGCGACGGAGAGCTCCAACCTCGAAGATCCTATGTGCGACGCAGACGAGTCCACCATTGGCCAAGACAAAGCCATTG ATGACACGATGTGCGAGCCTGGCGAGTCTGATAAAGACATTGCACGATCTTTCGAGCTCGACGACTCCGTCATTGGCAGT GATAAGACCAGCGCCGATTATTACTTCGACTCCTATTCTCACTTCGGTATTCATGAAGAAATGTTGAAGGATGTTGTGAG AACTAAGACCTATCAAAATGTCATTTATAAGAATAAGTTTCTGTTCAAGAACAAAGTAGTCCTTGATGTGGGAGCAGGGA CTGGAATTCTGTCCCTCTTTTGTGCAAAGGCAGGGGCAAAACATGTTTATGCGGTTGAGTGTTCCCATATGGCTGACATG GCAAAAGAGATTGTTGAAGTAAATGGATTTTCTGATGTTATAACAGTTATGAAAGGAAAGGTTGAAGAAATTGTTCTTCC TGTTGCTCAAGTGGATATCATTATATCAGAATGGATGGGCTACTTTTTGTTGTTTGAGAATATGTTAAATACAGTCCTAT ATGCTCGTGATAAATGGCTTGTGAATGATGGTATTGTGCTGCCAGACAAAGCATCTCTCTATTTGACAGCCATTGAGGAT GCGGAGTACAAAGAAGACAAGATTGAATGTGAGCCTATTGAGATTTTTAAAATACATTTGAGTAGAATATTTTTCTCATT CTGTCTATGTTTTTATGTGTGGGAAAGATGA |