Microexon ID Ta_5D:298764619-298764629:-
Species Triticum   Aestivum
Coordinates 5D:298764619..298764629
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq AACGACAAGACCAGCGCCGACTACTACTTCGACTCATACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTTGTTCGGACAAGATCATATCAAAATGTTATC
Microexon-tag Amino Acid Seq NDKTSADYYFDSYSHFGIHEEMLKDVVRTRSYQNVI
Microexon-tag spanning region298764101-298765851
Microexon-tag prediction score0.9724
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5D02G195000.1x
Reference Transcript ID TraesCS5D02G195000.1
Gene ID TraesCS5D02G195000
Gene Name NA
Transcript ID TraesCS5D02G195000.1
Protein ID
Gene ID TraesCS5D02G195000
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS5D02G195000.1
MDRRKGSGSRDANGGLAEATASRLRFEDADEVAGEVGMEVEESPAAPGEEVIGNDKTSADYYFDSYSHFGIHEEMLKDVV
RTRSYQNVITQNNFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGFSEVITVIKGKVEEIDL
PVPKVDVIISEWMGYFLLFENMLDTVLFARDKWLADDGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDMSCIKKQA
MMEPLVDTVDQNQIVTNCQLLKTMDISKMSSGDASFTVPFKLVAERNDFIHALVAYFNVSFTKCHKLMGFSTGPRSKSTH
WKQTVLYLEDVVTICEGETLSGSMTVANNKKNPRDIDITLKYAINGNRCKVSRTQHYKMR*
CDS seq >TraesCS5D02G195000.1
ATGGATCGGCGCAAGGGCAGCGGCAGCCGCGACGCCAACGGCGGCCTCGCGGAGGCGACGGCGTCCAGGCTCAGGTTCGA
GGACGCCGACGAGGTGGCCGGGGAGGTCGGGATGGAGGTGGAGGAGAGCCCCGCCGCGCCCGGGGAGGAGGTCATCGGCA
ACGACAAGACCAGCGCCGACTACTACTTCGACTCATACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTTGTT
CGGACAAGATCATATCAAAATGTTATCACCCAGAATAACTTTCTTTTCAAGGACAAAATAGTCCTTGATGTTGGTGCTGG
GACCGGTATCCTATCACTTTTTTGTGCGAAGGCAGGAGCTAAGCACGTCTATGCGATTGAATGCTCACAGATGGCGGACA
TGGCAAAGGAAATTGTGAAAACAAATGGATTTTCTGAAGTCATTACGGTAATAAAAGGGAAAGTTGAAGAAATTGATCTT
CCCGTCCCAAAAGTAGATGTCATAATCTCTGAATGGATGGGTTATTTCCTCCTGTTTGAGAATATGTTGGACACTGTTCT
TTTTGCACGTGATAAATGGCTGGCTGATGATGGTGTTGTCCTGCCAGACAAAGCCTCTTTACATCTTACTGCAATTGAAG
ATGCAGAATACAAGGAGGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATGAGCTGTATTAAGAAACAGGCG
ATGATGGAGCCACTTGTAGATACTGTGGATCAAAATCAGATCGTCACTAACTGTCAGTTACTGAAGACGATGGATATTTC
CAAGATGTCATCTGGGGATGCATCATTTACTGTGCCGTTCAAATTGGTAGCAGAGCGTAATGACTTCATCCATGCTCTTG
TTGCTTACTTTAACGTGTCGTTCACCAAATGCCATAAGCTGATGGGCTTCTCGACAGGGCCCAGATCAAAGTCCACCCAC
TGGAAGCAGACGGTTCTGTATCTCGAGGATGTAGTAACCATCTGCGAGGGGGAGACCCTGTCGGGCAGCATGACAGTTGC
GAACAACAAGAAGAACCCCCGAGACATCGACATTACGCTGAAATACGCCATAAACGGCAATAGGTGCAAGGTATCCAGAA
CACAACACTACAAGATGCGGTGA
Ta_5D:298764619-298764629:- does not have available information here.