
Microexon ID | Ta_5D:298764619-298764629:- |
Species | Triticum Aestivum | Coordinates | 5D:298764619..298764629 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | AACGACAAGACCAGCGCCGACTACTACTTCGACTCATACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTTGTTCGGACAAGATCATATCAAAATGTTATC |
Microexon-tag Amino Acid Seq | NDKTSADYYFDSYSHFGIHEEMLKDVVRTRSYQNVI |
Microexon-tag spanning region | 298764101-298765851 |
Microexon-tag prediction score | 0.9724 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5D02G195000.1x |
Reference Transcript ID | TraesCS5D02G195000.1 |
Gene ID | TraesCS5D02G195000 |
Gene Name | NA |
Transcript ID | TraesCS5D02G195000.1 |
Protein ID | |
Gene ID | TraesCS5D02G195000 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS5D02G195000.1 MDRRKGSGSRDANGGLAEATASRLRFEDADEVAGEVGMEVEESPAAPGEEVIGNDKTSADYYFDSYSHFGIHEEMLKDVV RTRSYQNVITQNNFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGFSEVITVIKGKVEEIDL PVPKVDVIISEWMGYFLLFENMLDTVLFARDKWLADDGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDMSCIKKQA MMEPLVDTVDQNQIVTNCQLLKTMDISKMSSGDASFTVPFKLVAERNDFIHALVAYFNVSFTKCHKLMGFSTGPRSKSTH WKQTVLYLEDVVTICEGETLSGSMTVANNKKNPRDIDITLKYAINGNRCKVSRTQHYKMR* |
CDS seq | >TraesCS5D02G195000.1 ATGGATCGGCGCAAGGGCAGCGGCAGCCGCGACGCCAACGGCGGCCTCGCGGAGGCGACGGCGTCCAGGCTCAGGTTCGA GGACGCCGACGAGGTGGCCGGGGAGGTCGGGATGGAGGTGGAGGAGAGCCCCGCCGCGCCCGGGGAGGAGGTCATCGGCA ACGACAAGACCAGCGCCGACTACTACTTCGACTCATACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTTGTT CGGACAAGATCATATCAAAATGTTATCACCCAGAATAACTTTCTTTTCAAGGACAAAATAGTCCTTGATGTTGGTGCTGG GACCGGTATCCTATCACTTTTTTGTGCGAAGGCAGGAGCTAAGCACGTCTATGCGATTGAATGCTCACAGATGGCGGACA TGGCAAAGGAAATTGTGAAAACAAATGGATTTTCTGAAGTCATTACGGTAATAAAAGGGAAAGTTGAAGAAATTGATCTT CCCGTCCCAAAAGTAGATGTCATAATCTCTGAATGGATGGGTTATTTCCTCCTGTTTGAGAATATGTTGGACACTGTTCT TTTTGCACGTGATAAATGGCTGGCTGATGATGGTGTTGTCCTGCCAGACAAAGCCTCTTTACATCTTACTGCAATTGAAG ATGCAGAATACAAGGAGGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATGAGCTGTATTAAGAAACAGGCG ATGATGGAGCCACTTGTAGATACTGTGGATCAAAATCAGATCGTCACTAACTGTCAGTTACTGAAGACGATGGATATTTC CAAGATGTCATCTGGGGATGCATCATTTACTGTGCCGTTCAAATTGGTAGCAGAGCGTAATGACTTCATCCATGCTCTTG TTGCTTACTTTAACGTGTCGTTCACCAAATGCCATAAGCTGATGGGCTTCTCGACAGGGCCCAGATCAAAGTCCACCCAC TGGAAGCAGACGGTTCTGTATCTCGAGGATGTAGTAACCATCTGCGAGGGGGAGACCCTGTCGGGCAGCATGACAGTTGC GAACAACAAGAAGAACCCCCGAGACATCGACATTACGCTGAAATACGCCATAAACGGCAATAGGTGCAAGGTATCCAGAA CACAACACTACAAGATGCGGTGA |
Ta_5D:298764619-298764629:- does not have available information here.