Microexon ID Ta_5B:339495282-339495292:-
Species Triticum   Aestivum
Coordinates 5B:339495282..339495292
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq AACGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGGATTCATGAAGAAATGCTAAAAGATGTTGTTCGGACAAGATCATATCAAAATGTTATC
Microexon-tag Amino Acid Seq NDKTSADYYFDSYSHFGIHEEMLKDVVRTRSYQNVI
Microexon-tag spanning region339495096-339496272
Microexon-tag prediction score0.9719
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5B02G187400.1x
Reference Transcript ID TraesCS5B02G187400.1
Gene ID TraesCS5B02G187400
Gene Name NA
Transcript ID TraesCS5B02G187400.1
Protein ID
Gene ID TraesCS5B02G187400
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >TraesCS5B02G187400.1
MDRRKGSGSRDANGGLAEATASRLRFEDADEVAEEVGMEVEESPAAPGEEVIGNDKTSADYYFDSYSHFGIHEEMLKDVV
RTRSYQNVITQNNFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGFSEVITVIKGKVEEIEL
PVPKVDVIISEWMGYFLLFENMLDTVLFARDKWLADDGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDMSCIKKQA
MMEPLVDTVDQNQIVTNCQLLKTMDISKMSSGDASFTVPFKLVAERNDFIHALVAYFNVSFTKCHKLMGFSTGPRSKSTH
WKQTVLYLEDVVTICEGETLSGSMTVANNKKNPRDIDITLKYAINGNRCKVSRTQHYKMR*
CDS seq >TraesCS5B02G187400.1
ATGGATCGGCGCAAGGGCAGCGGCAGCCGCGACGCCAACGGCGGCCTCGCGGAGGCGACGGCGTCCAGGCTCAGGTTCGA
GGACGCCGACGAGGTGGCCGAGGAGGTCGGGATGGAGGTGGAGGAGAGCCCCGCCGCGCCCGGGGAGGAGGTCATCGGCA
ACGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGGATTCATGAAGAAATGCTAAAAGATGTTGTT
CGGACAAGATCATATCAAAATGTTATCACCCAGAATAACTTTCTTTTCAAGGACAAAATAGTCCTTGATGTTGGTGCTGG
GACCGGTATCCTATCACTTTTTTGTGCAAAGGCAGGAGCTAAGCATGTCTATGCGATTGAATGCTCACAGATGGCGGACA
TGGCAAAGGAAATTGTGAAAACAAATGGATTTTCTGAAGTCATTACGGTAATAAAAGGGAAAGTTGAAGAAATTGAGCTT
CCTGTCCCAAAAGTAGATGTCATAATCTCTGAATGGATGGGTTATTTCCTCCTGTTTGAGAATATGTTGGACACTGTTCT
TTTTGCACGTGATAAATGGCTGGCTGATGATGGTGTTGTCCTGCCAGACAAAGCCTCTTTACATCTTACTGCAATTGAAG
ATGCAGAATACAAGGAGGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATGAGCTGTATTAAGAAACAGGCA
ATGATGGAGCCACTTGTAGATACTGTGGATCAAAATCAGATCGTCACTAACTGTCAGTTACTGAAGACGATGGATATTTC
CAAGATGTCATCTGGGGATGCATCATTTACTGTGCCGTTCAAATTGGTAGCAGAGCGTAATGACTTCATCCATGCTCTTG
TTGCTTACTTTAACGTGTCATTCACCAAATGCCATAAGCTGATGGGCTTCTCGACAGGGCCCAGATCAAAGTCCACTCAC
TGGAAGCAGACTGTTCTGTATCTCGAGGATGTGGTAACTATCTGTGAGGGAGAGACTCTGTCGGGCAGCATGACAGTTGC
AAACAACAAAAAGAACCCTCGGGACATTGACATTACGCTGAAATACGCCATAAACGGCAATAGGTGCAAGGTGTCCAGAA
CACAACACTACAAGATGCGGTGA
Ta_5B:339495282-339495292:- does not have available information here.