Microexon ID Sm_GL377601:296053-296063:-
Species Selaginella moellendorffii
Coordinates GL377601:296053..296063
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCACGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GTCGATCCCACCAGCGCGGATTATTACTTCGATTCTTATGCGCATTTCGGTATTCACGAAGAAATGCTTAAAGATACTGTGAGAACGAAGACTTACCAGAACGTTATT
Microexon-tag Amino Acid Seq VDPTSADYYFDSYAHFGIHEEMLKDTVRTKTYQNVI
Microexon-tag spanning region295938-296166
Microexon-tag prediction score0.9478
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ20820x
Reference Transcript ID EFJ20820
Gene ID SELMODRAFT_108460
Gene Name NA
Transcript ID EFJ20820
Protein ID EFJ20820
Gene ID SELMODRAFT_108460
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.0056
Motif start 31
Motif end 133
Protein seq >EFJ20820
MEEILPEEHEVDPTSADYYFDSYAHFGIHEEMLKDTVRTKTYQNVIYENGFLFKDKVVLDVGAGTGILSLFCAKGGAKHV
YAVECSLMANTAKEIIQKNGYSDVITVLKGKVEEIELPVQQVDVIISEWMGYFLLFENMLDTVLYARDKWLVPGGVVLPD
RTSLHLTAIEDADYKHEKINFWSSVYGFDMSCIKKQAMLEPLVDTVEPNQIVTQTQLIKTMDISNMTPGDVSFSAPFKLV
ATRNDFIHALVAYFDVSFTKCHKVVGFSTGPRSRPTHWKQTVLYLEDVITICEGEALTGKMSVAPNARNPRDVDIVVEYT
FNGKRSQASRRQHFRMR*
CDS seq >EFJ20820
ATGGAGGAAATCCTCCCCGAGGAGCACGAGGTCGATCCCACCAGCGCGGATTATTACTTCGATTCTTATGCGCATTTCGG
TATTCACGAAGAAATGCTTAAAGATACTGTGAGAACGAAGACTTACCAGAACGTTATTTATGAAAATGGATTCCTCTTCA
AGGACAAGGTAGTTCTAGATGTCGGTGCCGGGACGGGAATTCTCTCCTTGTTTTGTGCGAAGGGTGGAGCAAAGCATGTC
TATGCGGTGGAATGCTCGCTAATGGCCAATACCGCGAAAGAAATCATACAAAAGAATGGATATAGTGATGTGATTACTGT
CCTCAAAGGCAAGGTGGAAGAGATCGAGCTCCCTGTTCAGCAAGTGGACGTGATCATCTCCGAATGGATGGGATATTTCC
TTCTCTTCGAAAACATGCTCGACACTGTCCTGTATGCCCGTGACAAATGGCTCGTGCCCGGCGGCGTGGTTCTTCCGGAC
AGAACAAGCTTGCACTTGACAGCGATCGAAGACGCAGACTACAAGCACGAGAAAATAAACTTCTGGAGCTCGGTCTATGG
ATTTGACATGAGCTGCATCAAGAAACAAGCGATGCTGGAGCCTCTGGTTGACACGGTCGAGCCAAACCAGATCGTCACAC
AGACGCAGCTGATCAAGACAATGGATATTAGCAACATGACACCCGGGGATGTGTCCTTCTCGGCTCCGTTCAAGCTCGTT
GCCACCCGAAACGATTTTATCCATGCGCTGGTAGCATACTTCGACGTCTCCTTTACAAAGTGCCACAAGGTGGTGGGATT
CTCCACAGGGCCTCGTTCTCGTCCAACGCACTGGAAGCAAACCGTCTTGTATCTGGAAGACGTGATCACGATTTGCGAGG
GAGAGGCGCTTACCGGGAAGATGTCGGTGGCTCCAAACGCCCGCAATCCTCGAGACGTGGACATTGTCGTCGAGTATACT
TTCAATGGCAAGCGCAGCCAAGCGTCTCGGAGGCAACACTTTAGGATGCGATAA
Microexon DNA seq NA
Microexon Amino Acid seq NA
Microexon-tag DNA Seq NA
Microexon-tag Amino Acid seq NA
Transcript ID Sm.16862.1
Gene ID Sm.16862
Gene Name NA
Pfam domain motif NA
Motif E-value NA
Motif start NA
Motif end NA
Protein seq
CDS seq