Microexon ID Sm_GL377572:3407026-3407036:+
Species Selaginella moellendorffii
Coordinates GL377572:3407026..3407036
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCACGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GTCGATCCCACCAGCGCGGATTATTACTTCGATTCTTATGCGCATTTCGGTATTCACGAAGAAATGCTTAAAGATACTGTGAGAACGAAGACTTACCAGAACGTTATT
Microexon-tag Amino Acid Seq VDPTSADYYFDSYAHFGIHEEMLKDTVRTKTYQNVI
Microexon-tag spanning region3406923-3407151
Microexon-tag prediction score0.9478
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ32427x
Reference Transcript ID EFJ32427
Gene ID SELMODRAFT_86090
Gene Name NA
Transcript ID EFJ32427
Protein ID EFJ32427
Gene ID SELMODRAFT_86090
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.0056
Motif start 31
Motif end 133
Protein seq >EFJ32427
MEEILPEEHEVDPTSADYYFDSYAHFGIHEEMLKDTVRTKTYQNVIYENGFLFKDKVVLDVGAGTGILSLFCAKGGAKHV
YAVECSLMANTAKEIIQKNGYSDVITVLKGKVEEIELPVQQVDVIISEWMGYFLLFENMLDTVLYARDKWLVPGGVVLPD
RTSLHLTAIEDADYKHEKINFWSSVYGFDMSCIKKQAMLEPLVDTVEPNQIVTQTQLIKTMDISNMTPGDVSFSAPFKLV
ATRNDFIHALVAYFDVSFTKCHKVVGFSTGPRSRPTHWKQTVLYLEDVITICEGEALTGKMSVAPNARNPRDVDIVVEYT
FNGKRSQASRRQHFRMR*
CDS seq >EFJ32427
ATGGAGGAAATCCTCCCCGAGGAGCACGAGGTCGATCCCACCAGCGCGGATTATTACTTCGATTCTTATGCGCATTTCGG
TATTCACGAAGAAATGCTTAAAGATACTGTGAGAACGAAGACTTACCAGAACGTTATTTATGAAAATGGATTCCTCTTCA
AGGACAAGGTAGTTCTAGATGTCGGTGCCGGGACGGGAATTCTCTCCTTGTTTTGTGCGAAGGGTGGAGCAAAGCATGTC
TATGCGGTGGAATGCTCGCTAATGGCCAATACCGCGAAAGAAATCATACAAAAGAATGGATATAGTGATGTGATTACTGT
CCTCAAAGGCAAGGTGGAAGAGATCGAGCTCCCTGTTCAGCAAGTAGACGTGATCATCTCCGAATGGATGGGATATTTCC
TTCTCTTCGAAAACATGCTCGACACTGTCCTGTATGCCCGTGACAAATGGCTCGTGCCCGGCGGCGTGGTTCTTCCGGAC
AGAACAAGCTTGCACTTGACAGCGATCGAAGACGCAGACTACAAGCACGAGAAAATAAACTTCTGGAGCTCGGTCTATGG
ATTTGACATGAGCTGCATCAAGAAACAAGCGATGCTGGAGCCTCTGGTTGACACGGTCGAGCCAAACCAGATCGTCACAC
AGACGCAGCTGATCAAGACAATGGATATTAGCAACATGACACCCGGGGATGTGTCCTTCTCGGCTCCGTTCAAGCTCGTT
GCCACCCGAAACGATTTTATCCATGCGCTGGTAGCATACTTCGACGTCTCCTTTACAAAGTGCCACAAGGTGGTGGGATT
CTCCACAGGGCCTCGTTCTCGTCCAACGCACTGGAAGCAAACCGTCTTGTATCTGGAAGACGTGATCACGATTTGCGAGG
GAGAGGCGCTTACCGGGAAGATGTCGGTGGCTCCAAACGCCCGCAATCCTCGAGACGTGGACATTGTCGTCGAGTATACT
TTCAATGGCAAGCGCAGCCAAGCGTCTCGGAGGCAACACTTTAGGATGCGATAA
Microexon DNA seq GTATTCACGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GTCGATCCCACCAGCGCGGATTATTACTTCGATTCTTATGCGCATTTCGGTATTCACGAAGAAATGCTTAAAGATACTGTGAGAACGAAGACTTACCAGAACGTTATT
Microexon-tag Amino Acid seq VDPTSADYYFDSYAHFGIHEEMLKDTVRTKTYQNVI
Transcript ID EFJ32427
Gene ID Sm.6264
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.0056
Motif start 31
Motif end 133
Protein seq >EFJ32427
MEEILPEEHEVDPTSADYYFDSYAHFGIHEEMLKDTVRTKTYQNVIYENGFLFKDKVVLDVGAGTGILSLFCAKGGAKHV
YAVECSLMANTAKEIIQKNGYSDVITVLKGKVEEIELPVQQVDVIISEWMGYFLLFENMLDTVLYARDKWLVPGGVVLPD
RTSLHLTAIEDADYKHEKINFWSSVYGFDMSCIKKQAMLEPLVDTVEPNQIVTQTQLIKTMDISNMTPGDVSFSAPFKLV
ATRNDFIHALVAYFDVSFTKCHKVVGFSTGPRSRPTHWKQTVLYLEDVITICEGEALTGKMSVAPNARNPRDVDIVVEYT
FNGKRSQASRRQHFRMR*
CDS seq >EFJ32427
ATGGAGGAAATCCTCCCCGAGGAGCACGAGGTCGATCCCACCAGCGCGGATTATTACTTCGATTCTTATGCGCATTTCGG
TATTCACGAAGAAATGCTTAAAGATACTGTGAGAACGAAGACTTACCAGAACGTTATTTATGAAAATGGATTCCTCTTCA
AGGACAAGGTAGTTCTAGATGTCGGTGCCGGGACGGGAATTCTCTCCTTGTTTTGTGCGAAGGGTGGAGCAAAGCATGTC
TATGCGGTGGAATGCTCGCTAATGGCCAATACCGCGAAAGAAATCATACAAAAGAATGGATATAGTGATGTGATTACTGT
CCTCAAAGGCAAGGTGGAAGAGATCGAGCTCCCTGTTCAGCAAGTAGACGTGATCATCTCCGAATGGATGGGATATTTCC
TTCTCTTCGAAAACATGCTCGACACTGTCCTGTATGCCCGTGACAAATGGCTCGTGCCCGGCGGCGTGGTTCTTCCGGAC
AGAACAAGCTTGCACTTGACAGCGATCGAAGACGCAGACTACAAGCACGAGAAAATAAACTTCTGGAGCTCGGTCTATGG
ATTTGACATGAGCTGCATCAAGAAACAAGCGATGCTGGAGCCTCTGGTTGACACGGTCGAGCCAAACCAGATCGTCACAC
AGACGCAGCTGATCAAGACAATGGATATTAGCAACATGACACCCGGGGATGTGTCCTTCTCGGCTCCGTTCAAGCTCGTT
GCCACCCGAAACGATTTTATCCATGCGCTGGTAGCATACTTCGACGTCTCCTTTACAAAGTGCCACAAGGTGGTGGGATT
CTCCACAGGGCCTCGTTCTCGTCCAACGCACTGGAAGCAAACCGTCTTGTATCTGGAAGACGTGATCACGATTTGCGAGG
GAGAGGCGCTTACCGGGAAGATGTCGGTGGCTCCAAACGCCCGCAATCCTCGAGACGTGGACATTGTCGTCGAGTATACT
TTCAATGGCAAGCGCAGCCAAGCGTCTCGGAGGCAACACTTTAGGATGCGATAA