
Microexon ID | Sl_7:36554592-36554602:+ |
Species | Solanum Lycopersicum | Coordinates | 7:36554592..36554602 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | AGCAACAAGACTAGCGCTGACTATTACTTCGACTCATATTCTCACTTTGGTATTCATGAAGAGATGTTAAAGGATGTGGTGAGAACTAAAACTTACCAAAATGTTATT |
Microexon-tag Amino Acid Seq | SNKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Microexon-tag spanning region | 36553836-36554763 |
Microexon-tag prediction score | 0.9702 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc07g032240.3.1x |
Reference Transcript ID | Solyc07g032240.3.1 |
Gene ID | Solyc07g032240.3 |
Gene Name | NA |
Transcript ID | Solyc07g032240.3.1 |
Protein ID | |
Gene ID | Solyc07g032240.3 |
Gene Name | |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00068 |
Motif start | 70 |
Motif end | 171 |
Protein seq | >Solyc07g032240.3.1 MDCRSNYENQNSGSTSSKMKFEYEDESSNIEVEEDTSMCDPIDESIVGSNKTSADYYFDSYSHFGIHEEMLKDVVRTKTY QNVIYKNSFLIKDKVVLDVGAGTGILSLFCAKVGAKHVYAIECSSMADMAQEIVKLNGFSDVITVIKGKVEEIDFPVRKV DIIISEWMGYFLLYENMLDTVLYARDKWLVKDGLVLPDKASLYLTAIEDADYKDEKIEFWNSVYGFDMSCLQKQTIMEPL VDNVDQKQIVTNCQLLKTMDISKMASGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLTGFSTGPRSRGTHWKQTV LYLEDVLTVCQGEAVVGSMTVASNKKNPRDLDIMLKYSVNGQRCSVSRTQCYRMR* |
CDS seq | >Solyc07g032240.3.1 ATGGATTGTCGAAGTAACTATGAAAATCAGAACTCGGGAAGCACATCATCAAAGATGAAATTTGAGTACGAGGATGAAAG CTCCAACATTGAGGTGGAGGAAGATACCTCCATGTGTGACCCAATTGACGAATCTATTGTGGGCAGCAACAAGACTAGCG CTGACTATTACTTCGACTCATATTCTCACTTTGGTATTCATGAAGAGATGTTAAAGGATGTGGTGAGAACTAAAACTTAC CAAAATGTTATTTACAAAAACTCCTTCTTAATCAAGGATAAAGTGGTACTTGATGTGGGTGCTGGGACGGGAATCTTGTC ACTCTTTTGTGCAAAAGTTGGCGCCAAACATGTTTATGCGATTGAGTGCTCCAGCATGGCTGATATGGCCCAAGAAATTG TAAAACTCAATGGGTTCTCAGACGTTATAACTGTTATCAAGGGAAAGGTAGAAGAGATTGACTTTCCGGTTCGAAAAGTG GATATAATTATTTCTGAGTGGATGGGATACTTTCTTCTTTATGAGAACATGTTAGATACAGTCTTATATGCTCGTGACAA ATGGCTGGTAAAAGATGGTCTTGTGCTGCCAGATAAAGCTTCTTTGTATTTAACAGCAATTGAAGATGCTGACTACAAAG ATGAGAAAATCGAATTTTGGAATAGTGTGTATGGTTTTGATATGAGCTGCTTACAGAAGCAAACTATAATGGAACCACTT GTTGATAATGTAGATCAGAAGCAGATTGTTACAAATTGCCAGTTACTCAAGACAATGGATATCTCTAAGATGGCTTCTGG TGATGCTTCCTTCACAGTTCCGTTTAAGCTAGTCGCAGAACGTGACGATTACATCCATGCCCTTGTAGCTTACTTTGATG TCTCTTTCACGAAGTGTCACAAATTGACTGGCTTCTCCACAGGACCAAGGTCTCGTGGTACACACTGGAAGCAAACGGTT CTCTACCTGGAAGATGTGCTTACTGTATGCCAGGGGGAAGCTGTAGTTGGGAGTATGACTGTGGCGTCTAACAAGAAGAA TCCTCGAGATCTTGATATAATGCTAAAGTATTCAGTAAATGGTCAGCGTTGTTCTGTTTCAAGAACTCAGTGTTATCGGA TGCGATGA |
Sl_7:36554592-36554602:+ does not have available information here.