Microexon ID Sl_7:36554592-36554602:+
Species Solanum   Lycopersicum
Coordinates 7:36554592..36554602
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq AGCAACAAGACTAGCGCTGACTATTACTTCGACTCATATTCTCACTTTGGTATTCATGAAGAGATGTTAAAGGATGTGGTGAGAACTAAAACTTACCAAAATGTTATT
Microexon-tag Amino Acid Seq SNKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI
Microexon-tag spanning region36553836-36554763
Microexon-tag prediction score0.9702
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc07g032240.3.1x
Reference Transcript ID Solyc07g032240.3.1
Gene ID Solyc07g032240.3
Gene Name NA
Transcript ID Solyc07g032240.3.1
Protein ID
Gene ID Solyc07g032240.3
Gene Name
Pfam domain motif PRMT5
Motif E-value 0.00068
Motif start 70
Motif end 171
Protein seq >Solyc07g032240.3.1
MDCRSNYENQNSGSTSSKMKFEYEDESSNIEVEEDTSMCDPIDESIVGSNKTSADYYFDSYSHFGIHEEMLKDVVRTKTY
QNVIYKNSFLIKDKVVLDVGAGTGILSLFCAKVGAKHVYAIECSSMADMAQEIVKLNGFSDVITVIKGKVEEIDFPVRKV
DIIISEWMGYFLLYENMLDTVLYARDKWLVKDGLVLPDKASLYLTAIEDADYKDEKIEFWNSVYGFDMSCLQKQTIMEPL
VDNVDQKQIVTNCQLLKTMDISKMASGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLTGFSTGPRSRGTHWKQTV
LYLEDVLTVCQGEAVVGSMTVASNKKNPRDLDIMLKYSVNGQRCSVSRTQCYRMR*
CDS seq >Solyc07g032240.3.1
ATGGATTGTCGAAGTAACTATGAAAATCAGAACTCGGGAAGCACATCATCAAAGATGAAATTTGAGTACGAGGATGAAAG
CTCCAACATTGAGGTGGAGGAAGATACCTCCATGTGTGACCCAATTGACGAATCTATTGTGGGCAGCAACAAGACTAGCG
CTGACTATTACTTCGACTCATATTCTCACTTTGGTATTCATGAAGAGATGTTAAAGGATGTGGTGAGAACTAAAACTTAC
CAAAATGTTATTTACAAAAACTCCTTCTTAATCAAGGATAAAGTGGTACTTGATGTGGGTGCTGGGACGGGAATCTTGTC
ACTCTTTTGTGCAAAAGTTGGCGCCAAACATGTTTATGCGATTGAGTGCTCCAGCATGGCTGATATGGCCCAAGAAATTG
TAAAACTCAATGGGTTCTCAGACGTTATAACTGTTATCAAGGGAAAGGTAGAAGAGATTGACTTTCCGGTTCGAAAAGTG
GATATAATTATTTCTGAGTGGATGGGATACTTTCTTCTTTATGAGAACATGTTAGATACAGTCTTATATGCTCGTGACAA
ATGGCTGGTAAAAGATGGTCTTGTGCTGCCAGATAAAGCTTCTTTGTATTTAACAGCAATTGAAGATGCTGACTACAAAG
ATGAGAAAATCGAATTTTGGAATAGTGTGTATGGTTTTGATATGAGCTGCTTACAGAAGCAAACTATAATGGAACCACTT
GTTGATAATGTAGATCAGAAGCAGATTGTTACAAATTGCCAGTTACTCAAGACAATGGATATCTCTAAGATGGCTTCTGG
TGATGCTTCCTTCACAGTTCCGTTTAAGCTAGTCGCAGAACGTGACGATTACATCCATGCCCTTGTAGCTTACTTTGATG
TCTCTTTCACGAAGTGTCACAAATTGACTGGCTTCTCCACAGGACCAAGGTCTCGTGGTACACACTGGAAGCAAACGGTT
CTCTACCTGGAAGATGTGCTTACTGTATGCCAGGGGGAAGCTGTAGTTGGGAGTATGACTGTGGCGTCTAACAAGAAGAA
TCCTCGAGATCTTGATATAATGCTAAAGTATTCAGTAAATGGTCAGCGTTGTTCTGTTTCAAGAACTCAGTGTTATCGGA
TGCGATGA
Sl_7:36554592-36554602:+ does not have available information here.