Microexon ID Sb_2:56015932-56015942:-
Species Sorghum   Bicolor
Coordinates 2:56015932..56015942
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq AGCGAAAAGACCAGCGCCGACTACTACTTCGACTCCTATTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTTGTTCGGACAAAGACATATCAAAATGTTATC
Microexon-tag Amino Acid Seq SEKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI
Microexon-tag spanning region56015736-56017045
Microexon-tag prediction score0.9793
Overlapped with the annotated transcript (%) 100
New Transcript ID EER98789x
Reference Transcript ID EER98789
Gene ID SORBI_3002G179000
Gene Name NA
Transcript ID EER98789
Protein ID
Gene ID SORBI_3002G179000
Gene Name
Pfam domain motif PRMT5
Motif E-value 0.00039
Motif start 78
Motif end 180
Protein seq >EER98789
MDRRKGSNRDANGGLAEATASRLRFDTEEEAEEVGMEVEESLDAEGEDGQASAEVIGSEKTSADYYFDSYSHFGIHEEML
KDVVRTKTYQNVIFQNSFLIKDKVVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKSNGYSDVITVIKGKVE
EIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKTSLRLTAIEDAEYKEDKIEFWNNVYGFDMSCI
KKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFDVSFTKCHKLMGFSTGPRS
KATHWKQTVLYLEDVITICQGETLTGSMTVTPNKNNPRDIDIKLKYSIDGHRCQVSRTQFYKMR*
CDS seq >EER98789
ATGGATCGTCGCAAGGGCAGCAACCGCGACGCCAACGGCGGCCTGGCGGAGGCCACGGCGTCGCGGCTGAGGTTCGACAC
CGAGGAAGAGGCGGAAGAGGTGGGTATGGAGGTGGAAGAGAGCCTCGACGCGGAGGGGGAGGACGGGCAGGCGTCGGCGG
AGGTGATTGGAAGCGAAAAGACCAGCGCCGACTACTACTTCGACTCCTATTCCCACTTCGGTATTCATGAAGAAATGCTA
AAAGATGTTGTTCGGACAAAGACATATCAAAATGTTATCTTCCAGAACAGCTTTCTTATCAAGGACAAAGTAGTCCTTGA
TGTTGGTGCTGGAACTGGAATTCTTTCACTTTTCTGTGCAAAGGCAGGAGCTAAACATGTCTATGCGATTGAATGTTCCC
AGATGGCAGACATGGCAAAGGAAATTGTGAAATCAAATGGATATTCTGATGTCATAACTGTAATAAAAGGGAAAGTGGAA
GAAATAGAACTTCCGGTCCCAAAAGTAGATGTCATCATCTCGGAGTGGATGGGTTATTTTCTCCTGTTCGAGAATATGTT
GAACACTGTCCTATATGCACGTGATAAATGGCTTGCTGATGGTGGTGTGGTCCTGCCAGACAAAACTTCTTTGCGTCTTA
CTGCGATTGAAGATGCTGAATATAAGGAAGACAAAATTGAATTTTGGAATAATGTATATGGATTTGATATGAGCTGCATA
AAGAAACAGGCGATGATGGAGCCACTGGTAGATACAGTGGATGCAAATCAGATTGTCACTAACTGCCAGTTACTAAAGAC
AATGGATATCTCCAAAATGACCCCTGGTGACGCGTCCTTTACTGTACCATTCAAGCTGGTTGCGGAGCGGAATGATTACA
TTCATGCTCTTGTTGCATACTTCGACGTGTCATTCACCAAATGCCATAAGCTGATGGGCTTCTCAACAGGCCCGAGGTCA
AAAGCCACTCACTGGAAGCAAACTGTTCTTTACCTCGAGGATGTAATAACTATCTGCCAGGGGGAAACCCTGACGGGTAG
CATGACAGTCACACCCAATAAGAACAACCCTCGAGATATCGACATTAAGCTCAAGTACTCCATAGATGGGCATAGGTGTC
AGGTATCAAGAACTCAATTCTACAAGATGCGGTGA
Sb_2:56015932-56015942:- does not have available information here.