
Microexon ID | Ps_NC_039359.1:70532323-70532333:+ |
Species | Papaver somniferum | Coordinates | NC_039359.1:70532323..70532333 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTTGGTATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATATCAAAATGTTATT |
Microexon-tag Amino Acid Seq | DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI |
Microexon-tag spanning region | 70531909-70532710 |
Microexon-tag prediction score | 0.9763 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026591673.1x |
Reference Transcript ID | XM_026591673.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026591673.1 |
Protein ID | XP_026447458.1 |
Gene ID | LOC113347980 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 4e-04 |
Motif start | 84 |
Motif end | 186 |
Protein seq | >XP_026447458.1 MGRRRSNNGGSSSSSNIENNNHPQVTKLCIDDDDNELPEEMITPSIDQSMSEADNSTAVIGGDDDKTSADYYFDSYSHFG IHEEMLKDTVRTKTYQNVIYKNTFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKQIVETNGFSNVITV LKGKVEEIELPVPKVDIIISEWMGYFLLFENMLDTVLYARNKWLVNDGIVLPDKASLYVTAIEDHEYKEDKIEFWNDVYG FDMKCIKKQSIMEPLVDTVDQNQIVTNCQLLKTMDILKMASGDVSFTAPFKLRAERSDYIHALVAYFDVSFTQCHKLMGF STGPRSRTTHWKQTVLYLEDVLTICEGEVLSGSMTVSQNKKNPRDVDITLKYELNGQRSKISGTQHYKMR* |
CDS seq | >XM_026591673.1 ATGGGCCGTAGAAGAAGTAACAATGGGGGTTCTTCATCATCAAGTAATATTGAGAATAATAATCATCCACAAGTAACTAA GTTATGTATTGATGATGATGATAATGAGCTACCAGAAGAGATGATTACTCCTTCTATTGATCAATCTATGTCTGAAGCTG ATAATAGTACAGCTGTTATTGGTGGTGATGATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTTGGT ATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATATCAAAATGTTATTTACAAGAACACGTTCCTCTTCAA GGATAAAATTGTTCTTGATGTTGGTGCTGGTACTGGAATTTTGTCCCTCTTTTGTGCAAAAGCAGGAGCAAAGCATGTTT ATGCGATCGAGTGTTCCCAAATGGCTGACATGGCGAAACAGATTGTTGAAACAAATGGCTTTTCTAATGTTATTACAGTA TTGAAGGGAAAGGTGGAAGAGATTGAGCTTCCAGTCCCCAAAGTTGATATCATCATATCCGAGTGGATGGGTTATTTCCT GTTGTTTGAGAATATGTTAGACACTGTTCTATATGCACGTAACAAGTGGTTGGTAAATGATGGGATTGTGTTGCCCGACA AGGCATCACTCTACGTGACAGCCATTGAGGATCATGAGTATAAGGAAGACAAAATTGAATTCTGGAATGATGTTTACGGC TTCGACATGAAATGTATCAAAAAACAATCCATAATGGAACCCCTTGTAGACACGGTTGATCAGAATCAAATCGTCACAAA CTGTCAGCTGCTTAAGACAATGGATATCTTGAAGATGGCTTCTGGAGATGTCTCGTTTACAGCTCCCTTTAAGCTCAGGG CTGAACGTAGTGATTATATTCATGCCCTAGTTGCATACTTTGATGTCTCATTTACGCAGTGTCATAAGTTGATGGGCTTC TCTACAGGACCTAGATCCCGCACCACGCATTGGAAGCAAACGGTATTGTACCTTGAAGATGTGCTAACCATTTGTGAAGG TGAAGTACTGTCTGGGAGCATGACAGTTTCACAAAACAAGAAGAATCCTCGCGATGTTGATATTACTCTTAAATATGAAT TGAATGGTCAGCGTAGCAAGATATCAGGAACTCAGCATTACAAGATGCGTTGA |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTTGGTATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATATCAAAATGTTATT |
Microexon-tag Amino Acid seq | DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI |
Transcript ID | XM_026591673.1 |
Gene ID | Ps.10616 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 4e-04 |
Motif start | 84 |
Motif end | 186 |
Protein seq | >XM_026591673.1 MGRRRSNNGGSSSSSNIENNNHPQVTKLCIDDDDNELPEEMITPSIDQSMSEADNSTAVIGGDDDKTSADYYFDSYSHFG IHEEMLKDTVRTKTYQNVIYKNTFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKQIVETNGFSNVITV LKGKVEEIELPVPKVDIIISEWMGYFLLFENMLDTVLYARNKWLVNDGIVLPDKASLYVTAIEDHEYKEDKIEFWNDVYG FDMKCIKKQSIMEPLVDTVDQNQIVTNCQLLKTMDILKMASGDVSFTAPFKLRAERSDYIHALVAYFDVSFTQCHKLMGF STGPRSRTTHWKQTVLYLEDVLTICEGEVLSGSMTVSQNKKNPRDVDITLKYELNGQRSKISGTQHYKMR* |
CDS seq | >XM_026591673.1 ATGGGCCGTAGAAGAAGTAACAATGGGGGTTCTTCATCATCAAGTAATATTGAGAATAATAATCATCCACAAGTAACTAA GTTATGTATTGATGATGATGATAATGAGCTACCAGAAGAGATGATTACTCCTTCTATTGATCAATCTATGTCTGAAGCTG ATAATAGTACAGCTGTTATTGGTGGTGATGATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTTGGT ATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATATCAAAATGTTATTTACAAGAACACGTTCCTCTTCAA GGATAAAATTGTTCTTGATGTTGGTGCTGGTACTGGAATTTTGTCCCTCTTTTGTGCAAAAGCAGGAGCAAAGCATGTTT ATGCGATCGAGTGTTCCCAAATGGCTGACATGGCGAAACAGATTGTTGAAACAAATGGCTTTTCTAATGTTATTACAGTA TTGAAGGGAAAGGTGGAAGAGATTGAGCTTCCAGTCCCCAAAGTTGATATCATCATATCCGAGTGGATGGGTTATTTCCT GTTGTTTGAGAATATGTTAGACACTGTTCTATATGCACGTAACAAGTGGTTGGTAAATGATGGGATTGTGTTGCCCGACA AGGCATCACTCTACGTGACAGCCATTGAGGATCATGAGTATAAGGAAGACAAAATTGAATTCTGGAATGATGTTTACGGC TTCGACATGAAATGTATCAAAAAACAATCCATAATGGAACCCCTTGTAGACACGGTTGATCAGAATCAAATCGTCACAAA CTGTCAGCTGCTTAAGACAATGGATATCTTGAAGATGGCTTCTGGAGATGTCTCGTTTACAGCTCCCTTTAAGCTCAGGG CTGAACGTAGTGATTATATTCATGCCCTAGTTGCATACTTTGATGTCTCATTTACGCAGTGTCATAAGTTGATGGGCTTC TCTACAGGACCTAGATCCCGCACCACGCATTGGAAGCAAACGGTATTGTACCTTGAAGATGTGCTAACCATTTGTGAAGG TGAAGTACTGTCTGGGAGCATGACAGTTTCACAAAACAAGAAGAATCCTCGCGATGTTGATATTACTCTTAAATATGAAT TGAATGGTCAGCGTAGCAAGATATCAGGAACTCAGCATTACAAGATGCGTTGA |