
Microexon ID | Ps_NC_039359.1:146986436-146986446:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:146986436..146986446 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTTGGTATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATACCAAAATGTTATC |
Microexon-tag Amino Acid Seq | DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI |
Microexon-tag spanning region | 146986062-146986856 |
Microexon-tag prediction score | 0.9768 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026593352.1x |
Reference Transcript ID | XM_026593352.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026593352.1 |
Protein ID | XP_026449137.1 |
Gene ID | LOC113349384 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 4e-04 |
Motif start | 85 |
Motif end | 187 |
Protein seq | >XP_026449137.1 MGRRRSNNGGSSSSSNIENNNHPQVTKLCIDDDDNELPEEMITPTTDQSMSEADNSTAVVGGGDDDKTSADYYFDSYSHF GIHEEMLKDTVRTKTYQNVIYKNTFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKQIVETNGFSNVIT VLKGKVEEIELPVPKVDIIISEWMGYFLLFENMLDTVLYARNKWLVNDGIVLPDKASLYVTAIEDHEYKEDKIEFWNDVY GFDMKCIKKQSIMEPLVDTVDQNQIVTNYQLLKTMDILKMASGDVSFTAPFKLRAERSDYIHALVAYFDVSFTQCHKLMG FSTGPRSRTTHWKQTVLYLEDVLTICEGEVLSGSMTVSQNKKNPRDVDITLKYELNGQRSKISGTQHYKMR* |
CDS seq | >XM_026593352.1 ATGGGCCGTAGAAGAAGCAACAATGGGGGTTCTTCATCATCAAGTAATATTGAGAATAATAATCATCCGCAAGTAACTAA GTTATGTATCGATGATGATGATAATGAACTACCAGAAGAGATGATTACTCCTACTACTGATCAATCTATGTCTGAAGCTG ATAATAGTACGGCTGTTGTTGGTGGTGGTGATGATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTT GGTATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATACCAAAATGTTATCTACAAGAACACGTTCCTCTT CAAGGATAAAATTGTTCTTGATGTTGGTGCTGGTACTGGAATTTTATCCCTCTTTTGTGCAAAAGCAGGAGCAAAGCATG TTTATGCGATCGAGTGTTCCCAAATGGCTGACATGGCGAAACAGATTGTTGAAACAAATGGCTTCTCTAATGTTATTACA GTTTTGAAGGGGAAGGTGGAAGAGATTGAGCTTCCAGTCCCCAAAGTTGATATCATCATATCCGAGTGGATGGGTTATTT TCTATTGTTTGAGAATATGTTAGACACTGTTCTTTATGCACGTAACAAGTGGCTTGTAAACGATGGGATTGTGTTGCCCG ACAAGGCGTCACTCTACGTAACAGCCATTGAGGATCATGAGTACAAGGAAGACAAAATTGAATTCTGGAATGATGTTTAC GGCTTCGACATGAAATGTATCAAAAAACAATCCATAATGGAACCCCTTGTAGACACGGTTGATCAAAATCAAATTGTCAC AAACTATCAGCTGCTGAAGACAATGGATATCTTGAAGATGGCTTCTGGAGATGTCTCATTTACAGCTCCCTTTAAGCTCA GGGCTGAACGTAGTGACTATATTCATGCCCTAGTTGCATACTTTGATGTCTCATTTACGCAGTGTCATAAGTTGATGGGC TTCTCTACAGGACCTAGATCCCGCACCACGCATTGGAAGCAAACGGTATTGTACCTTGAGGACGTGCTAACCATTTGCGA AGGTGAAGTACTGTCTGGGAGCATGACAGTTTCACAAAACAAGAAGAATCCTCGTGATGTTGATATTACTCTTAAATATG AATTGAATGGTCAGCGTAGCAAGATATCAGGAACTCAACATTACAAGATGCGTTGA |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTTGGTATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATACCAAAATGTTATC |
Microexon-tag Amino Acid seq | DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI |
Transcript ID | XM_026593352.1 |
Gene ID | Ps.13044 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 4e-04 |
Motif start | 85 |
Motif end | 187 |
Protein seq | >XM_026593352.1 MGRRRSNNGGSSSSSNIENNNHPQVTKLCIDDDDNELPEEMITPTTDQSMSEADNSTAVVGGGDDDKTSADYYFDSYSHF GIHEEMLKDTVRTKTYQNVIYKNTFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKQIVETNGFSNVIT VLKGKVEEIELPVPKVDIIISEWMGYFLLFENMLDTVLYARNKWLVNDGIVLPDKASLYVTAIEDHEYKEDKIEFWNDVY GFDMKCIKKQSIMEPLVDTVDQNQIVTNYQLLKTMDILKMASGDVSFTAPFKLRAERSDYIHALVAYFDVSFTQCHKLMG FSTGPRSRTTHWKQTVLYLEDVLTICEGEVLSGSMTVSQNKKNPRDVDITLKYELNGQRSKISGTQHYKMR* |
CDS seq | >XM_026593352.1 ATGGGCCGTAGAAGAAGCAACAATGGGGGTTCTTCATCATCAAGTAATATTGAGAATAATAATCATCCGCAAGTAACTAA GTTATGTATCGATGATGATGATAATGAACTACCAGAAGAGATGATTACTCCTACTACTGATCAATCTATGTCTGAAGCTG ATAATAGTACGGCTGTTGTTGGTGGTGGTGATGATGATAAAACTAGTGCTGATTATTACTTCGATTCTTATTCTCACTTT GGTATTCATGAAGAAATGTTGAAGGACACAGTGAGGACAAAGACATACCAAAATGTTATCTACAAGAACACGTTCCTCTT CAAGGATAAAATTGTTCTTGATGTTGGTGCTGGTACTGGAATTTTATCCCTCTTTTGTGCAAAAGCAGGAGCAAAGCATG TTTATGCGATCGAGTGTTCCCAAATGGCTGACATGGCGAAACAGATTGTTGAAACAAATGGCTTCTCTAATGTTATTACA GTTTTGAAGGGGAAGGTGGAAGAGATTGAGCTTCCAGTCCCCAAAGTTGATATCATCATATCCGAGTGGATGGGTTATTT TCTATTGTTTGAGAATATGTTAGACACTGTTCTTTATGCACGTAACAAGTGGCTTGTAAACGATGGGATTGTGTTGCCCG ACAAGGCGTCACTCTACGTAACAGCCATTGAGGATCATGAGTACAAGGAAGACAAAATTGAATTCTGGAATGATGTTTAC GGCTTCGACATGAAATGTATCAAAAAACAATCCATAATGGAACCCCTTGTAGACACGGTTGATCAAAATCAAATTGTCAC AAACTATCAGCTGCTGAAGACAATGGATATCTTGAAGATGGCTTCTGGAGATGTCTCATTTACAGCTCCCTTTAAGCTCA GGGCTGAACGTAGTGACTATATTCATGCCCTAGTTGCATACTTTGATGTCTCATTTACGCAGTGTCATAAGTTGATGGGC TTCTCTACAGGACCTAGATCCCGCACCACGCATTGGAAGCAAACGGTATTGTACCTTGAGGACGTGCTAACCATTTGCGA AGGTGAAGTACTGTCTGGGAGCATGACAGTTTCACAAAACAAGAAGAATCCTCGTGATGTTGATATTACTCTTAAATATG AATTGAATGGTCAGCGTAGCAAGATATCAGGAACTCAACATTACAAGATGCGTTGA |