
Microexon ID | Pp_14:14451890-14451900:+ |
Species | Physcomitrium patens | Coordinates | 14:14451890..14451900 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | TCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATGCTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATC |
Microexon-tag Amino Acid Seq | SDHTSSDYYFDSYAHFGIHEEMLKDAVRTKTYQNAI |
Microexon-tag spanning region | 14451398-14452231 |
Microexon-tag prediction score | 0.9435 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c14_22470V3.1x |
Reference Transcript ID | Pp3c14_22470V3.1 |
Gene ID | Pp3c14_22470 |
Gene Name | NA |
Transcript ID | Pp3c14_22470V3.1 |
Protein ID | Pp3c14_22470V3.1 |
Gene ID | Pp3c14_22470 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00018 |
Motif start | 80 |
Motif end | 181 |
Protein seq | >Pp3c14_22470V3.1 MGRRNKGKAVREGSSAMDVVADANGTEAMAVEGETVVAPPEPLIAAIRIEGDEGAVTPSDHTSSDYYFDSYAHFGIHEEM LKDAVRTKTYQNAIYQNRFLFKDKVVLDVGAGTGVLSLFCAKGGAKHVYAVECSTMAETAREIVKTNGFSDVVTVIKGKL EDITLPVDKVDIIISEWMGYFLLFENMLDTVLYARDKWLVPGGLVMPDKTSLYLTAIEDAEYKQEKINFWEQVYGFDMSC IKKQAMVEPLVDVVDANQIVTHAAHLKTMDISKMSTGDASFTAPFKLVATRNDFIHALVAYFDVTFSMCHKPIGFSTGPK ARPTHWKQTVMYLEDVIAICEGEALTGTMTVSQNKKNPRDLDVTVTYNFKGKRSQASRTQHYRMR* |
CDS seq | >Pp3c14_22470V3.1 ATGGGCCGTCGTAACAAGGGGAAGGCGGTGAGAGAAGGGTCGTCCGCCATGGATGTTGTTGCGGATGCGAATGGCACTGA GGCTATGGCTGTAGAAGGCGAGACGGTTGTTGCTCCCCCTGAGCCTCTGATCGCCGCGATTCGTATCGAGGGCGACGAGG GAGCGGTCACGCCGTCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATG CTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATCTATCAGAATAGGTTTTTATTTAAGGATAAAGTAGTCCT GGACGTGGGAGCAGGTACTGGTGTGCTCTCCCTTTTCTGCGCCAAGGGGGGTGCTAAGCACGTATATGCAGTTGAATGCT CGACAATGGCCGAGACTGCACGGGAGATTGTGAAAACCAACGGATTCAGTGATGTTGTCACGGTTATCAAAGGGAAGTTG GAGGACATAACTCTGCCAGTCGACAAAGTCGACATTATCATCTCAGAGTGGATGGGCTATTTCCTTCTCTTCGAAAATAT GCTTGACACTGTACTTTATGCTCGAGACAAGTGGTTGGTTCCTGGAGGTCTGGTCATGCCCGATAAGACTTCTTTGTATC TCACTGCCATCGAAGATGCTGAATACAAACAGGAGAAAATTAACTTTTGGGAGCAAGTGTACGGGTTTGACATGAGCTGT ATTAAGAAACAGGCGATGGTAGAACCTCTAGTGGATGTGGTTGACGCCAACCAAATTGTGACACATGCCGCACACTTAAA GACAATGGATATCAGCAAGATGAGCACCGGAGATGCTTCTTTCACAGCTCCCTTCAAATTAGTGGCTACCCGAAATGATT TTATACATGCTTTGGTCGCCTATTTTGACGTCACTTTCTCAATGTGCCATAAGCCCATTGGGTTTTCAACAGGACCCAAG GCACGGCCAACGCACTGGAAGCAAACTGTGATGTACTTGGAGGACGTCATCGCAATCTGTGAGGGTGAGGCCTTGACAGG CACAATGACAGTCTCCCAGAATAAGAAGAATCCCCGTGACTTGGATGTGACTGTCACATACAATTTCAAGGGGAAAAGGT CGCAAGCTTCAAGAACACAGCATTATCGCATGCGTTGA |
Microexon DNA seq | GCATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | TCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATGCTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATC |
Microexon-tag Amino Acid seq | SDHTSSDYYFDSYAHFGIHEEMLKDAVRTKTYQNAI |
Transcript ID | Pp3c14_22470V3.1 |
Gene ID | Pp.6196 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00018 |
Motif start | 80 |
Motif end | 181 |
Protein seq | >Pp3c14_22470V3.1 MGRRNKGKAVREGSSAMDVVADANGTEAMAVEGETVVAPPEPLIAAIRIEGDEGAVTPSDHTSSDYYFDSYAHFGIHEEM LKDAVRTKTYQNAIYQNRFLFKDKVVLDVGAGTGVLSLFCAKGGAKHVYAVECSTMAETAREIVKTNGFSDVVTVIKGKL EDITLPVDKVDIIISEWMGYFLLFENMLDTVLYARDKWLVPGGLVMPDKTSLYLTAIEDAEYKQEKINFWEQVYGFDMSC IKKQAMVEPLVDVVDANQIVTHAAHLKTMDISKMSTGDASFTAPFKLVATRNDFIHALVAYFDVTFSMCHKPIGFSTGPK ARPTHWKQTVMYLEDVIAICEGEALTGTMTVSQNKKNPRDLDVTVTYNFKGKRSQASRTQHYRMR* |
CDS seq | >Pp3c14_22470V3.1 ATGGGCCGTCGTAACAAGGGGAAGGCGGTGAGAGAAGGGTCGTCCGCCATGGATGTTGTTGCGGATGCGAATGGCACTGA GGCTATGGCTGTAGAAGGCGAGACGGTTGTTGCTCCCCCTGAGCCTCTGATCGCCGCGATTCGTATCGAGGGCGACGAGG GAGCGGTCACGCCGTCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATG CTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATCTATCAGAATAGGTTTTTATTTAAGGATAAAGTAGTCCT GGACGTGGGAGCAGGTACTGGTGTGCTCTCCCTTTTCTGCGCCAAGGGGGGTGCTAAGCACGTATATGCAGTTGAATGCT CGACAATGGCCGAGACTGCACGGGAGATTGTGAAAACCAACGGATTCAGTGATGTTGTCACGGTTATCAAAGGGAAGTTG GAGGACATAACTCTGCCAGTCGACAAAGTCGACATTATCATCTCAGAGTGGATGGGCTATTTCCTTCTCTTCGAAAATAT GCTTGACACTGTACTTTATGCTCGAGACAAGTGGTTGGTTCCTGGAGGTCTGGTCATGCCCGATAAGACTTCTTTGTATC TCACTGCCATCGAAGATGCTGAATACAAACAGGAGAAAATTAACTTTTGGGAGCAAGTGTACGGGTTTGACATGAGCTGT ATTAAGAAACAGGCGATGGTAGAACCTCTAGTGGATGTGGTTGACGCCAACCAAATTGTGACACATGCCGCACACTTAAA GACAATGGATATCAGCAAGATGAGCACCGGAGATGCTTCTTTCACAGCTCCCTTCAAATTAGTGGCTACCCGAAATGATT TTATACATGCTTTGGTCGCCTATTTTGACGTCACTTTCTCAATGTGCCATAAGCCCATTGGGTTTTCAACAGGACCCAAG GCACGGCCAACGCACTGGAAGCAAACTGTGATGTACTTGGAGGACGTCATCGCAATCTGTGAGGGTGAGGCCTTGACAGG CACAATGACAGTCTCCCAGAATAAGAAGAATCCCCGTGACTTGGATGTGACTGTCACATACAATTTCAAGGGGAAAAGGT CGCAAGCTTCAAGAACACAGCATTATCGCATGCGTTGA |