Microexon ID Pp_14:14451890-14451900:+
Species Physcomitrium patens
Coordinates 14:14451890..14451900
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq TCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATGCTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATC
Microexon-tag Amino Acid Seq SDHTSSDYYFDSYAHFGIHEEMLKDAVRTKTYQNAI
Microexon-tag spanning region14451398-14452231
Microexon-tag prediction score0.9435
Overlapped with the annotated transcript (%) 100
New Transcript ID Pp3c14_22470V3.1x
Reference Transcript ID Pp3c14_22470V3.1
Gene ID Pp3c14_22470
Gene Name NA
Transcript ID Pp3c14_22470V3.1
Protein ID Pp3c14_22470V3.1
Gene ID Pp3c14_22470
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.00018
Motif start 80
Motif end 181
Protein seq >Pp3c14_22470V3.1
MGRRNKGKAVREGSSAMDVVADANGTEAMAVEGETVVAPPEPLIAAIRIEGDEGAVTPSDHTSSDYYFDSYAHFGIHEEM
LKDAVRTKTYQNAIYQNRFLFKDKVVLDVGAGTGVLSLFCAKGGAKHVYAVECSTMAETAREIVKTNGFSDVVTVIKGKL
EDITLPVDKVDIIISEWMGYFLLFENMLDTVLYARDKWLVPGGLVMPDKTSLYLTAIEDAEYKQEKINFWEQVYGFDMSC
IKKQAMVEPLVDVVDANQIVTHAAHLKTMDISKMSTGDASFTAPFKLVATRNDFIHALVAYFDVTFSMCHKPIGFSTGPK
ARPTHWKQTVMYLEDVIAICEGEALTGTMTVSQNKKNPRDLDVTVTYNFKGKRSQASRTQHYRMR*
CDS seq >Pp3c14_22470V3.1
ATGGGCCGTCGTAACAAGGGGAAGGCGGTGAGAGAAGGGTCGTCCGCCATGGATGTTGTTGCGGATGCGAATGGCACTGA
GGCTATGGCTGTAGAAGGCGAGACGGTTGTTGCTCCCCCTGAGCCTCTGATCGCCGCGATTCGTATCGAGGGCGACGAGG
GAGCGGTCACGCCGTCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATG
CTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATCTATCAGAATAGGTTTTTATTTAAGGATAAAGTAGTCCT
GGACGTGGGAGCAGGTACTGGTGTGCTCTCCCTTTTCTGCGCCAAGGGGGGTGCTAAGCACGTATATGCAGTTGAATGCT
CGACAATGGCCGAGACTGCACGGGAGATTGTGAAAACCAACGGATTCAGTGATGTTGTCACGGTTATCAAAGGGAAGTTG
GAGGACATAACTCTGCCAGTCGACAAAGTCGACATTATCATCTCAGAGTGGATGGGCTATTTCCTTCTCTTCGAAAATAT
GCTTGACACTGTACTTTATGCTCGAGACAAGTGGTTGGTTCCTGGAGGTCTGGTCATGCCCGATAAGACTTCTTTGTATC
TCACTGCCATCGAAGATGCTGAATACAAACAGGAGAAAATTAACTTTTGGGAGCAAGTGTACGGGTTTGACATGAGCTGT
ATTAAGAAACAGGCGATGGTAGAACCTCTAGTGGATGTGGTTGACGCCAACCAAATTGTGACACATGCCGCACACTTAAA
GACAATGGATATCAGCAAGATGAGCACCGGAGATGCTTCTTTCACAGCTCCCTTCAAATTAGTGGCTACCCGAAATGATT
TTATACATGCTTTGGTCGCCTATTTTGACGTCACTTTCTCAATGTGCCATAAGCCCATTGGGTTTTCAACAGGACCCAAG
GCACGGCCAACGCACTGGAAGCAAACTGTGATGTACTTGGAGGACGTCATCGCAATCTGTGAGGGTGAGGCCTTGACAGG
CACAATGACAGTCTCCCAGAATAAGAAGAATCCCCGTGACTTGGATGTGACTGTCACATACAATTTCAAGGGGAAAAGGT
CGCAAGCTTCAAGAACACAGCATTATCGCATGCGTTGA
Microexon DNA seq GCATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq TCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATGCTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATC
Microexon-tag Amino Acid seq SDHTSSDYYFDSYAHFGIHEEMLKDAVRTKTYQNAI
Transcript ID Pp3c14_22470V3.1
Gene ID Pp.6196
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.00018
Motif start 80
Motif end 181
Protein seq >Pp3c14_22470V3.1
MGRRNKGKAVREGSSAMDVVADANGTEAMAVEGETVVAPPEPLIAAIRIEGDEGAVTPSDHTSSDYYFDSYAHFGIHEEM
LKDAVRTKTYQNAIYQNRFLFKDKVVLDVGAGTGVLSLFCAKGGAKHVYAVECSTMAETAREIVKTNGFSDVVTVIKGKL
EDITLPVDKVDIIISEWMGYFLLFENMLDTVLYARDKWLVPGGLVMPDKTSLYLTAIEDAEYKQEKINFWEQVYGFDMSC
IKKQAMVEPLVDVVDANQIVTHAAHLKTMDISKMSTGDASFTAPFKLVATRNDFIHALVAYFDVTFSMCHKPIGFSTGPK
ARPTHWKQTVMYLEDVIAICEGEALTGTMTVSQNKKNPRDLDVTVTYNFKGKRSQASRTQHYRMR*
CDS seq >Pp3c14_22470V3.1
ATGGGCCGTCGTAACAAGGGGAAGGCGGTGAGAGAAGGGTCGTCCGCCATGGATGTTGTTGCGGATGCGAATGGCACTGA
GGCTATGGCTGTAGAAGGCGAGACGGTTGTTGCTCCCCCTGAGCCTCTGATCGCCGCGATTCGTATCGAGGGCGACGAGG
GAGCGGTCACGCCGTCCGACCACACCAGCTCAGATTACTATTTCGATTCATATGCGCATTTCGGCATTCATGAAGAGATG
CTGAAGGATGCAGTGAGAACAAAGACGTATCAGAATGCTATCTATCAGAATAGGTTTTTATTTAAGGATAAAGTAGTCCT
GGACGTGGGAGCAGGTACTGGTGTGCTCTCCCTTTTCTGCGCCAAGGGGGGTGCTAAGCACGTATATGCAGTTGAATGCT
CGACAATGGCCGAGACTGCACGGGAGATTGTGAAAACCAACGGATTCAGTGATGTTGTCACGGTTATCAAAGGGAAGTTG
GAGGACATAACTCTGCCAGTCGACAAAGTCGACATTATCATCTCAGAGTGGATGGGCTATTTCCTTCTCTTCGAAAATAT
GCTTGACACTGTACTTTATGCTCGAGACAAGTGGTTGGTTCCTGGAGGTCTGGTCATGCCCGATAAGACTTCTTTGTATC
TCACTGCCATCGAAGATGCTGAATACAAACAGGAGAAAATTAACTTTTGGGAGCAAGTGTACGGGTTTGACATGAGCTGT
ATTAAGAAACAGGCGATGGTAGAACCTCTAGTGGATGTGGTTGACGCCAACCAAATTGTGACACATGCCGCACACTTAAA
GACAATGGATATCAGCAAGATGAGCACCGGAGATGCTTCTTTCACAGCTCCCTTCAAATTAGTGGCTACCCGAAATGATT
TTATACATGCTTTGGTCGCCTATTTTGACGTCACTTTCTCAATGTGCCATAAGCCCATTGGGTTTTCAACAGGACCCAAG
GCACGGCCAACGCACTGGAAGCAAACTGTGATGTACTTGGAGGACGTCATCGCAATCTGTGAGGGTGAGGCCTTGACAGG
CACAATGACAGTCTCCCAGAATAAGAAGAATCCCCGTGACTTGGATGTGACTGTCACATACAATTTCAAGGGGAAAAGGT
CGCAAGCTTCAAGAACACAGCATTATCGCATGCGTTGA