Microexon ID Os_9:11705349-11705359:-
Species Oryza sativa
Coordinates 9:11705349..11705359
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq AGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATC
Microexon-tag Amino Acid Seq SDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVI
Microexon-tag spanning region11705132-11706049
Microexon-tag prediction score0.9788
Overlapped with the annotated transcript (%) 100
New Transcript ID Os09t0359800-01x
Reference Transcript ID Os09t0359800-01
Gene ID Os09g0359800
Gene Name OsPRMT1
Transcript ID Os09t0359800-01
Protein ID Os09t0359800-01
Gene ID Os09g0359800
Gene Name OsPRMT1
Pfam domain motif PRMT5
Motif E-value 0.00016
Motif start 81
Motif end 183
Protein seq >Os09t0359800-01
MDQRKGSGSDANGGLAEATASRLRFEDPDEVMEENPAAAAATVGAEEEGGEGGGGEEVIGSDKTSADYYFDSYSHFGIHE
EMLKDVVRTKSYQNVITQNSFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGYSNVITVIKG
KVEEIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDM
RCIKKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFNVSFTKCHKMMGFSTG
PRSKATHWKQTVLYLEDVLTICEGETITGSMTVTPNKKNPRDIDIKLCYALSGHRCQVSRTQHYKMR*
CDS seq >Os09t0359800-01
ATGGATCAGCGCAAGGGCAGCGGCAGCGACGCCAACGGCGGCCTGGCGGAGGCGACGGCGTCGAGGCTGAGGTTCGAGGA
CCCCGACGAGGTCATGGAGGAGAACCCCGCCGCCGCCGCCGCCACCGTCGGGGCGGAGGAGGAAGGGGGAGAGGGAGGAG
GAGGGGAGGAGGTGATCGGCAGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAA
GAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATCACCCAGAACAGCTTTCTTTTCAAGGACAAAAT
AGTCCTTGATGTTGGTGCTGGGACTGGGATCCTCTCACTTTTCTGTGCAAAAGCAGGGGCTAAGCATGTCTATGCGATTG
AGTGTTCTCAAATGGCAGATATGGCAAAGGAAATTGTGAAAACAAATGGATATTCTAATGTTATAACGGTAATAAAAGGG
AAAGTGGAAGAAATTGAGCTTCCTGTCCCAAAAGTAGATGTAATAATCTCCGAATGGATGGGCTATTTCCTCCTGTTCGA
GAATATGCTGAACACTGTTCTATATGCACGTGATAAATGGCTTGCTGATGGTGGTGTTGTCCTACCTGACAAAGCTTCTT
TGCATCTTACTGCAATCGAAGATGCAGAATACAAAGAAGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATG
CGCTGTATCAAGAAACAGGCAATGATGGAGCCACTTGTAGATACGGTGGATGCAAATCAGATTGTCACTAACTGCCAGTT
ACTGAAGACAATGGATATTTCCAAAATGACACCTGGAGATGCGTCCTTTACAGTACCATTTAAGTTAGTAGCAGAGCGTA
ATGACTATATCCATGCTCTTGTTGCCTATTTCAATGTGTCCTTCACCAAATGCCATAAGATGATGGGCTTCTCAACAGGC
CCAAGATCAAAAGCCACTCACTGGAAGCAAACTGTTCTGTACCTGGAGGATGTACTGACCATCTGTGAGGGGGAAACCAT
CACAGGCAGTATGACTGTTACACCGAATAAAAAGAATCCCCGAGATATTGACATTAAGCTCTGCTACGCCCTAAGTGGGC
ATAGATGCCAAGTGTCAAGAACACAACACTACAAGATGCGGTGA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq AGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATC
Microexon-tag Amino Acid seq SDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVI
Transcript ID Os09t0359800-01
Gene ID Os.37266
Gene Name OsPRMT1
Pfam domain motif PRMT5
Motif E-value 0.00017
Motif start 81
Motif end 183
Protein seq >Os09t0359800-01
MDQRKGSGSDANGGLAEATASRLRFEDPDEVMEENPAAAAATVGAEEEGGEGGGGEEVIGSDKTSADYYFDSYSHFGIHE
EMLKDVVRTKSYQNVITQNSFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGYSNVITVIKG
KVEEIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDM
RCIKKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFNVSFTKCHKMMGFSTG
PRSKATHWKQTVLYLEDVLTICEGETITGSMTVTPNKKNPRDIDIKLCYALSGHRCQVSRTQHYKMR*
CDS seq >Os09t0359800-01
ATGGATCAGCGCAAGGGCAGCGGCAGCGACGCCAACGGCGGCCTGGCGGAGGCGACGGCGTCGAGGCTGAGGTTCGAGGA
CCCCGACGAGGTCATGGAGGAGAACCCCGCCGCCGCCGCCGCCACCGTCGGGGCGGAGGAGGAAGGGGGAGAGGGAGGAG
GAGGGGAGGAGGTGATCGGCAGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAA
GAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATCACCCAGAACAGCTTTCTTTTCAAGGACAAAAT
AGTCCTTGATGTTGGTGCTGGGACTGGGATCCTCTCACTTTTCTGTGCAAAAGCAGGGGCTAAGCATGTCTATGCGATTG
AGTGTTCTCAAATGGCAGATATGGCAAAGGAAATTGTGAAAACAAATGGATATTCTAATGTTATAACGGTAATAAAAGGG
AAAGTGGAAGAAATTGAGCTTCCTGTCCCAAAAGTAGATGTAATAATCTCCGAATGGATGGGCTATTTCCTCCTGTTCGA
GAATATGCTGAACACTGTTCTATATGCACGTGATAAATGGCTTGCTGATGGTGGTGTTGTCCTACCTGACAAAGCTTCTT
TGCATCTTACTGCAATCGAAGATGCAGAATACAAAGAAGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATG
CGCTGTATCAAGAAACAGGCAATGATGGAGCCACTTGTAGATACGGTGGATGCAAATCAGATTGTCACTAACTGCCAGTT
ACTGAAGACAATGGATATTTCCAAAATGACACCTGGAGATGCGTCCTTTACAGTACCATTTAAGTTAGTAGCAGAGCGTA
ATGACTATATCCATGCTCTTGTTGCCTATTTCAATGTGTCCTTCACCAAATGCCATAAGATGATGGGCTTCTCAACAGGC
CCAAGATCAAAAGCCACTCACTGGAAGCAAACTGTTCTGTACCTGGAGGATGTACTGACCATCTGTGAGGGGGAAACCAT
CACAGGCAGTATGACTGTTACACCGAATAAAAAGAATCCCCGAGATATTGACATTAAGCTCTGCTACGCCCTAAGTGGGC
ATAGATGCCAAGTGTCAAGAACACAACACTACAAGATGCGGTGA