
Microexon ID | Os_9:11705349-11705359:- |
Species | Oryza sativa | Coordinates | 9:11705349..11705359 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | AGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATC |
Microexon-tag Amino Acid Seq | SDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVI |
Microexon-tag spanning region | 11705132-11706049 |
Microexon-tag prediction score | 0.9788 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os09t0359800-01x |
Reference Transcript ID | Os09t0359800-01 |
Gene ID | Os09g0359800 |
Gene Name | OsPRMT1 |
Transcript ID | Os09t0359800-01 |
Protein ID | Os09t0359800-01 |
Gene ID | Os09g0359800 |
Gene Name | OsPRMT1 |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00016 |
Motif start | 81 |
Motif end | 183 |
Protein seq | >Os09t0359800-01 MDQRKGSGSDANGGLAEATASRLRFEDPDEVMEENPAAAAATVGAEEEGGEGGGGEEVIGSDKTSADYYFDSYSHFGIHE EMLKDVVRTKSYQNVITQNSFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGYSNVITVIKG KVEEIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDM RCIKKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFNVSFTKCHKMMGFSTG PRSKATHWKQTVLYLEDVLTICEGETITGSMTVTPNKKNPRDIDIKLCYALSGHRCQVSRTQHYKMR* |
CDS seq | >Os09t0359800-01 ATGGATCAGCGCAAGGGCAGCGGCAGCGACGCCAACGGCGGCCTGGCGGAGGCGACGGCGTCGAGGCTGAGGTTCGAGGA CCCCGACGAGGTCATGGAGGAGAACCCCGCCGCCGCCGCCGCCACCGTCGGGGCGGAGGAGGAAGGGGGAGAGGGAGGAG GAGGGGAGGAGGTGATCGGCAGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAA GAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATCACCCAGAACAGCTTTCTTTTCAAGGACAAAAT AGTCCTTGATGTTGGTGCTGGGACTGGGATCCTCTCACTTTTCTGTGCAAAAGCAGGGGCTAAGCATGTCTATGCGATTG AGTGTTCTCAAATGGCAGATATGGCAAAGGAAATTGTGAAAACAAATGGATATTCTAATGTTATAACGGTAATAAAAGGG AAAGTGGAAGAAATTGAGCTTCCTGTCCCAAAAGTAGATGTAATAATCTCCGAATGGATGGGCTATTTCCTCCTGTTCGA GAATATGCTGAACACTGTTCTATATGCACGTGATAAATGGCTTGCTGATGGTGGTGTTGTCCTACCTGACAAAGCTTCTT TGCATCTTACTGCAATCGAAGATGCAGAATACAAAGAAGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATG CGCTGTATCAAGAAACAGGCAATGATGGAGCCACTTGTAGATACGGTGGATGCAAATCAGATTGTCACTAACTGCCAGTT ACTGAAGACAATGGATATTTCCAAAATGACACCTGGAGATGCGTCCTTTACAGTACCATTTAAGTTAGTAGCAGAGCGTA ATGACTATATCCATGCTCTTGTTGCCTATTTCAATGTGTCCTTCACCAAATGCCATAAGATGATGGGCTTCTCAACAGGC CCAAGATCAAAAGCCACTCACTGGAAGCAAACTGTTCTGTACCTGGAGGATGTACTGACCATCTGTGAGGGGGAAACCAT CACAGGCAGTATGACTGTTACACCGAATAAAAAGAATCCCCGAGATATTGACATTAAGCTCTGCTACGCCCTAAGTGGGC ATAGATGCCAAGTGTCAAGAACACAACACTACAAGATGCGGTGA |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | AGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAAGAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATC |
Microexon-tag Amino Acid seq | SDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVI |
Transcript ID | Os09t0359800-01 |
Gene ID | Os.37266 |
Gene Name | OsPRMT1 |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00017 |
Motif start | 81 |
Motif end | 183 |
Protein seq | >Os09t0359800-01 MDQRKGSGSDANGGLAEATASRLRFEDPDEVMEENPAAAAATVGAEEEGGEGGGGEEVIGSDKTSADYYFDSYSHFGIHE EMLKDVVRTKSYQNVITQNSFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGYSNVITVIKG KVEEIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDM RCIKKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFNVSFTKCHKMMGFSTG PRSKATHWKQTVLYLEDVLTICEGETITGSMTVTPNKKNPRDIDIKLCYALSGHRCQVSRTQHYKMR* |
CDS seq | >Os09t0359800-01 ATGGATCAGCGCAAGGGCAGCGGCAGCGACGCCAACGGCGGCCTGGCGGAGGCGACGGCGTCGAGGCTGAGGTTCGAGGA CCCCGACGAGGTCATGGAGGAGAACCCCGCCGCCGCCGCCGCCACCGTCGGGGCGGAGGAGGAAGGGGGAGAGGGAGGAG GAGGGGAGGAGGTGATCGGCAGCGACAAGACCAGCGCCGACTACTACTTCGACTCCTACTCCCACTTCGGTATTCATGAA GAAATGCTAAAAGATGTGGTTCGGACAAAATCATATCAAAATGTTATCACCCAGAACAGCTTTCTTTTCAAGGACAAAAT AGTCCTTGATGTTGGTGCTGGGACTGGGATCCTCTCACTTTTCTGTGCAAAAGCAGGGGCTAAGCATGTCTATGCGATTG AGTGTTCTCAAATGGCAGATATGGCAAAGGAAATTGTGAAAACAAATGGATATTCTAATGTTATAACGGTAATAAAAGGG AAAGTGGAAGAAATTGAGCTTCCTGTCCCAAAAGTAGATGTAATAATCTCCGAATGGATGGGCTATTTCCTCCTGTTCGA GAATATGCTGAACACTGTTCTATATGCACGTGATAAATGGCTTGCTGATGGTGGTGTTGTCCTACCTGACAAAGCTTCTT TGCATCTTACTGCAATCGAAGATGCAGAATACAAAGAAGACAAAATTGAATTTTGGAATAATGTGTATGGCTTTGATATG CGCTGTATCAAGAAACAGGCAATGATGGAGCCACTTGTAGATACGGTGGATGCAAATCAGATTGTCACTAACTGCCAGTT ACTGAAGACAATGGATATTTCCAAAATGACACCTGGAGATGCGTCCTTTACAGTACCATTTAAGTTAGTAGCAGAGCGTA ATGACTATATCCATGCTCTTGTTGCCTATTTCAATGTGTCCTTCACCAAATGCCATAAGATGATGGGCTTCTCAACAGGC CCAAGATCAAAAGCCACTCACTGGAAGCAAACTGTTCTGTACCTGGAGGATGTACTGACCATCTGTGAGGGGGAAACCAT CACAGGCAGTATGACTGTTACACCGAATAAAAAGAATCCCCGAGATATTGACATTAAGCTCTGCTACGCCCTAAGTGGGC ATAGATGCCAAGTGTCAAGAACACAACACTACAAGATGCGGTGA |