
Microexon ID | Ha_10:244399941-244399951:+ |
Species | Helianthus annuus | Coordinates | 10:244399941..244399951 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACCAGCGCCGATTATTACTTCGATTCCTACTCTCACTTCGGTATTCATGAAGAAATGCTGAAGGATGTCGTGAGAACTAAGACTTACCAAAACGTTATC |
Microexon-tag Amino Acid Seq | DDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Microexon-tag spanning region | 244398046-244401230 |
Microexon-tag prediction score | 0.9927 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG13313x |
Reference Transcript ID | OTG13313 |
Gene ID | HannXRQ_Chr10g0319121 |
Gene Name | ATPRMT1A |
Transcript ID | OTG13313 |
Protein ID | OTG13313 |
Gene ID | HannXRQ_Chr10g0319121 |
Gene Name | ATPRMT1A |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00043 |
Motif start | 38 |
Motif end | 140 |
Protein seq | >OTG13313 MNSEAIHEDSSMREPVDDDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVIYRNTFLFKDKIVLDVGAGTGILSLFCA KAGAKHVYAVECSQMADMAKEIVEANGYSNVITVLKGKIEELDLPVPQVDIIISEWMGYFLLYENMLNTVLYARDKWLVN NGIVLPDNASLYLTAIEDAEYKEDKIEFWNNVYGFDMSCIRKQSIMEPLVDTVDQNQIVTNCQLLKTMDISKMTSGDASF TAPFKLVAERDDYVHALVAYFDVAFTVCHKLTGFSTGPRSRNTHWKQTVLYLEEVLTICEGESITGSMTVAQNKKNPRDV DITLKYSLNGQRCVISRTQQYKMR* |
CDS seq | >OTG13313 ATGAATAGTGAAGCAATCCATGAGGACTCCTCCATGCGTGAGCCTGTAGACGATGATAAAACCAGCGCCGATTATTACTT CGATTCCTACTCTCACTTCGGTATTCATGAAGAAATGCTGAAGGATGTCGTGAGAACTAAGACTTACCAAAACGTTATCT ACAGAAACACGTTCTTATTCAAGGACAAGATTGTTCTTGATGTTGGTGCAGGGACAGGGATTCTATCTCTCTTTTGCGCG AAAGCTGGGGCAAAACATGTTTATGCTGTTGAGTGTTCACAGATGGCTGACATGGCAAAAGAGATTGTCGAAGCAAATGG TTATTCTAATGTTATAACCGTTTTGAAAGGAAAGATTGAAGAGCTTGACCTACCGGTTCCTCAAGTGGATATTATTATTT CAGAATGGATGGGTTATTTCTTGTTATATGAAAACATGTTGAATACTGTTTTATATGCTCGCGATAAGTGGTTGGTTAAT AACGGAATTGTGCTACCTGATAACGCTTCTCTCTATCTGACAGCAATTGAGGATGCCGAGTACAAAGAAGACAAGATTGA ATTTTGGAACAATGTGTATGGTTTTGACATGAGCTGCATTAGGAAGCAGTCAATCATGGAACCTCTTGTTGACACAGTTG ACCAGAATCAGATTGTCACGAACTGCCAATTACTTAAGACCATGGACATCTCAAAGATGACATCAGGGGATGCTTCTTTC ACAGCACCTTTTAAACTTGTGGCTGAACGTGACGATTATGTTCATGCTTTAGTCGCATATTTTGATGTAGCGTTTACTGT GTGTCACAAACTCACAGGGTTTTCTACAGGACCAAGATCAAGAAACACACACTGGAAACAAACTGTTTTATATCTTGAAG AGGTGTTGACTATATGTGAAGGCGAATCGATTACTGGGAGCATGACTGTGGCACAAAATAAGAAGAATCCACGAGACGTG GATATCACACTCAAGTACTCGTTAAATGGTCAACGCTGTGTTATCTCAAGAACACAACAATACAAGATGCGCTAA |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACCAGCGCCGATTATTACTTCGATTCCTACTCTCACTTCGGTATTCATGAAGAAATGCTGAAGGATGTCGTGAGAACTAAGACTTACCAAAACGTTATC |
Microexon-tag Amino Acid seq | DDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Transcript ID | OTG13313 |
Gene ID | Ha.7391 |
Gene Name | ATPRMT1A |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00043 |
Motif start | 38 |
Motif end | 140 |
Protein seq | >OTG13313 MNSEAIHEDSSMREPVDDDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVIYRNTFLFKDKIVLDVGAGTGILSLFCA KAGAKHVYAVECSQMADMAKEIVEANGYSNVITVLKGKIEELDLPVPQVDIIISEWMGYFLLYENMLNTVLYARDKWLVN NGIVLPDNASLYLTAIEDAEYKEDKIEFWNNVYGFDMSCIRKQSIMEPLVDTVDQNQIVTNCQLLKTMDISKMTSGDASF TAPFKLVAERDDYVHALVAYFDVAFTVCHKLTGFSTGPRSRNTHWKQTVLYLEEVLTICEGESITGSMTVAQNKKNPRDV DITLKYSLNGQRCVISRTQQYKMR* |
CDS seq | >OTG13313 ATGAATAGTGAAGCAATCCATGAGGACTCCTCCATGCGTGAGCCTGTAGACGATGATAAAACCAGCGCCGATTATTACTT CGATTCCTACTCTCACTTCGGTATTCATGAAGAAATGCTGAAGGATGTCGTGAGAACTAAGACTTACCAAAACGTTATCT ACAGAAACACGTTCTTATTCAAGGACAAGATTGTTCTTGATGTTGGTGCAGGGACAGGGATTCTATCTCTCTTTTGCGCG AAAGCTGGGGCAAAACATGTTTATGCTGTTGAGTGTTCACAGATGGCTGACATGGCAAAAGAGATTGTCGAAGCAAATGG TTATTCTAATGTTATAACCGTTTTGAAAGGAAAGATTGAAGAGCTTGACCTACCGGTTCCTCAAGTGGATATTATTATTT CAGAATGGATGGGTTATTTCTTGTTATATGAAAACATGTTGAATACTGTTTTATATGCTCGCGATAAGTGGTTGGTTAAT AACGGAATTGTGCTACCTGATAACGCTTCTCTCTATCTGACAGCAATTGAGGATGCCGAGTACAAAGAAGACAAGATTGA ATTTTGGAACAATGTGTATGGTTTTGACATGAGCTGCATTAGGAAGCAGTCAATCATGGAACCTCTTGTTGACACAGTTG ACCAGAATCAGATTGTCACGAACTGCCAATTACTTAAGACCATGGACATCTCAAAGATGACATCAGGGGATGCTTCTTTC ACAGCACCTTTTAAACTTGTGGCTGAACGTGACGATTATGTTCATGCTTTAGTCGCATATTTTGATGTAGCGTTTACTGT GTGTCACAAACTCACAGGGTTTTCTACAGGACCAAGATCAAGAAACACACACTGGAAACAAACTGTTTTATATCTTGAAG AGGTGTTGACTATATGTGAAGGCGAATCGATTACTGGGAGCATGACTGTGGCACAAAATAAGAAGAATCCACGAGACGTG GATATCACACTCAAGTACTCGTTAAATGGTCAACGCTGTGTTATCTCAAGAACACAACAATACAAGATGCGCTAA |