
Microexon ID | Gm_1:399995-400005:- |
Species | Glycine max | Coordinates | 1:399995..400005 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAATTCACGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACCAGCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACATATCAAAATGTTATT |
Microexon-tag Amino Acid Seq | DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI |
Microexon-tag spanning region | 399763-400183 |
Microexon-tag prediction score | 0.9817 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH74166x |
Reference Transcript ID | KRH74166 |
Gene ID | GLYMA_01G003800 |
Gene Name | NA |
Transcript ID | KRH74166 |
Protein ID | KRH74166 |
Gene ID | GLYMA_01G003800 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00013 |
Motif start | 69 |
Motif end | 172 |
Protein seq | >KRH74166 MGQRKNDNNINQCSSSKEDADMNNNHLRFEEAVDESSNLDQSMCDIEESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKT YQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAK VDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEP LVDTVDQNQIATNCQLLKTMDISKMAPGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQT VLYLEDVLTICEGEAIVGSMAVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR* |
CDS seq | >KRH74166 ATGGGTCAGCGAAAGAACGACAACAACATCAATCAGTGCTCCTCAAGCAAGGAAGACGCTGACATGAATAACAACCACCT TCGCTTTGAAGAGGCTGTCGACGAGAGTTCCAACCTCGACCAATCCATGTGCGACATCGAAGAATCCGATGATAAAACCA GCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACA TATCAAAATGTTATTTATCAGAACAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTT ATCACTATTTTGTGCCAAAGCAGGGGCAGAACACGTCTATGCGGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGA TTGTTGAAGCTAATGGTTACTCTAATGTTGTAACAGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAA GTTGATATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCGGTGCTCTATGCTCGTGA CAAATGGCTTGTGGATGGCGGAGTTGTGCTACCAGACAAAGCATCCCTCCATCTCACTGCTATTGAAGATGCTGACTATA AAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCT CTTGTTGACACAGTCGACCAGAATCAGATTGCTACAAACTGTCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCC TGGAGATGCTTCATTCACAGTACCTTTTAAGCTTGTAGCTGAACGTGATGACTATATTCATGCTCTTGTTGCATATTTTG ATGTATCGTTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAGATCACGAGCTACGCATTGGAAACAAACA GTCCTATACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGGCAATTGTGGGGAGCATGGCTGTTGCTCCAAATAAAAA AAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCAAGGGTTCAGTACTACA AGATGCGTTGA |
Microexon DNA seq | GAATTCACGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATAAAACCAGCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACATATCAAAATGTTATT |
Microexon-tag Amino Acid seq | DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI |
Transcript ID | KRH74166 |
Gene ID | Gm.44 |
Gene Name | NA |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00013 |
Motif start | 69 |
Motif end | 172 |
Protein seq | >KRH74166 MGQRKNDNNINQCSSSKEDADMNNNHLRFEEAVDESSNLDQSMCDIEESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKT YQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAK VDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEP LVDTVDQNQIATNCQLLKTMDISKMAPGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQT VLYLEDVLTICEGEAIVGSMAVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR* |
CDS seq | >KRH74166 ATGGGTCAGCGAAAGAACGACAACAACATCAATCAGTGCTCCTCAAGCAAGGAAGACGCTGACATGAATAACAACCACCT TCGCTTTGAAGAGGCTGTCGACGAGAGTTCCAACCTCGACCAATCCATGTGCGACATCGAAGAATCCGATGATAAAACCA GCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACA TATCAAAATGTTATTTATCAGAACAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTT ATCACTATTTTGTGCCAAAGCAGGGGCAGAACACGTCTATGCGGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGA TTGTTGAAGCTAATGGTTACTCTAATGTTGTAACAGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAA GTTGATATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCGGTGCTCTATGCTCGTGA CAAATGGCTTGTGGATGGCGGAGTTGTGCTACCAGACAAAGCATCCCTCCATCTCACTGCTATTGAAGATGCTGACTATA AAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCT CTTGTTGACACAGTCGACCAGAATCAGATTGCTACAAACTGTCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCC TGGAGATGCTTCATTCACAGTACCTTTTAAGCTTGTAGCTGAACGTGATGACTATATTCATGCTCTTGTTGCATATTTTG ATGTATCGTTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAGATCACGAGCTACGCATTGGAAACAAACA GTCCTATACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGGCAATTGTGGGGAGCATGGCTGTTGCTCCAAATAAAAA AAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCAAGGGTTCAGTACTACA AGATGCGTTGA |