Microexon ID Gm_1:399995-400005:-
Species Glycine max
Coordinates 1:399995..400005
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAATTCACGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GATGATAAAACCAGCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACATATCAAAATGTTATT
Microexon-tag Amino Acid Seq DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI
Microexon-tag spanning region399763-400183
Microexon-tag prediction score0.9817
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH74166x
Reference Transcript ID KRH74166
Gene ID GLYMA_01G003800
Gene Name NA
Transcript ID KRH74166
Protein ID KRH74166
Gene ID GLYMA_01G003800
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.00013
Motif start 69
Motif end 172
Protein seq >KRH74166
MGQRKNDNNINQCSSSKEDADMNNNHLRFEEAVDESSNLDQSMCDIEESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKT
YQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAK
VDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEP
LVDTVDQNQIATNCQLLKTMDISKMAPGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQT
VLYLEDVLTICEGEAIVGSMAVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR*
CDS seq >KRH74166
ATGGGTCAGCGAAAGAACGACAACAACATCAATCAGTGCTCCTCAAGCAAGGAAGACGCTGACATGAATAACAACCACCT
TCGCTTTGAAGAGGCTGTCGACGAGAGTTCCAACCTCGACCAATCCATGTGCGACATCGAAGAATCCGATGATAAAACCA
GCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACA
TATCAAAATGTTATTTATCAGAACAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTT
ATCACTATTTTGTGCCAAAGCAGGGGCAGAACACGTCTATGCGGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGA
TTGTTGAAGCTAATGGTTACTCTAATGTTGTAACAGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAA
GTTGATATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCGGTGCTCTATGCTCGTGA
CAAATGGCTTGTGGATGGCGGAGTTGTGCTACCAGACAAAGCATCCCTCCATCTCACTGCTATTGAAGATGCTGACTATA
AAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCT
CTTGTTGACACAGTCGACCAGAATCAGATTGCTACAAACTGTCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCC
TGGAGATGCTTCATTCACAGTACCTTTTAAGCTTGTAGCTGAACGTGATGACTATATTCATGCTCTTGTTGCATATTTTG
ATGTATCGTTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAGATCACGAGCTACGCATTGGAAACAAACA
GTCCTATACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGGCAATTGTGGGGAGCATGGCTGTTGCTCCAAATAAAAA
AAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCAAGGGTTCAGTACTACA
AGATGCGTTGA
Microexon DNA seq GAATTCACGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GATGATAAAACCAGCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACATATCAAAATGTTATT
Microexon-tag Amino Acid seq DDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVI
Transcript ID KRH74166
Gene ID Gm.44
Gene Name NA
Pfam domain motif PRMT5
Motif E-value 0.00013
Motif start 69
Motif end 172
Protein seq >KRH74166
MGQRKNDNNINQCSSSKEDADMNNNHLRFEEAVDESSNLDQSMCDIEESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKT
YQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAK
VDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEP
LVDTVDQNQIATNCQLLKTMDISKMAPGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQT
VLYLEDVLTICEGEAIVGSMAVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR*
CDS seq >KRH74166
ATGGGTCAGCGAAAGAACGACAACAACATCAATCAGTGCTCCTCAAGCAAGGAAGACGCTGACATGAATAACAACCACCT
TCGCTTTGAAGAGGCTGTCGACGAGAGTTCCAACCTCGACCAATCCATGTGCGACATCGAAGAATCCGATGATAAAACCA
GCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACA
TATCAAAATGTTATTTATCAGAACAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTT
ATCACTATTTTGTGCCAAAGCAGGGGCAGAACACGTCTATGCGGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGA
TTGTTGAAGCTAATGGTTACTCTAATGTTGTAACAGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAA
GTTGATATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCGGTGCTCTATGCTCGTGA
CAAATGGCTTGTGGATGGCGGAGTTGTGCTACCAGACAAAGCATCCCTCCATCTCACTGCTATTGAAGATGCTGACTATA
AAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCT
CTTGTTGACACAGTCGACCAGAATCAGATTGCTACAAACTGTCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCC
TGGAGATGCTTCATTCACAGTACCTTTTAAGCTTGTAGCTGAACGTGATGACTATATTCATGCTCTTGTTGCATATTTTG
ATGTATCGTTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAGATCACGAGCTACGCATTGGAAACAAACA
GTCCTATACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGGCAATTGTGGGGAGCATGGCTGTTGCTCCAAATAAAAA
AAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCAAGGGTTCAGTACTACA
AGATGCGTTGA