| Microexon ID | Bn_scaffoldA03:28552167-28552177:+ |
| Species | Brassica Napus | Coordinates | scaffoldA03:28552167..28552177 |
| Microexon Cluster ID | MEP26 |
| Size | 11 |
| Phase | 1 |
| Pfam Domain Motif | PRMT5 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GGATTCATGAA |
| Microexon Amino Acid seq | GIHE |
| Microexon-tag DNA Seq | GATGATACCACCAGCGCCGATTACTACTTCGACTCCTACTCTCACTTCGGGATTCATGAAGAGATGTTGAAGGATGTAGTGAGAACCAAGACTTACCAGAACGTGATT |
| Microexon-tag Amino Acid Seq | DDTTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
| Microexon-tag spanning region | 28552035-28552303 |
| Microexon-tag prediction score | 0.9831 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA03T0511300ZSx |
| Reference Transcript ID | BnaA03T0511300ZS |
| Gene ID | BnaA03G0511300ZS |
| Gene Name | NA |
| Transcript ID | BnaA03T0511300ZS |
| Protein ID | |
| Gene ID | BnaA03G0511300ZS |
| Gene Name | |
| Pfam domain motif | PRMT5 |
| Motif E-value | 0.00087 |
| Motif start | 84 |
| Motif end | 185 |
| Protein seq | >BnaA03T0511300ZS MTKKNNNNNEEEEEFVSFGHNLNTKIRFEDADEDETAQGSAEAATAQDEPMCDAADITTDAADDTTSADYYFDSYSHFGI HEEMLKDVVRTKTYQNVIYQNKFLIKDKVVLDVGAGTGILSLFCAKAGAKHVYAVECSQMADMAKEIVKANGFSDVITVL KGKIEEIELPTPKVDVIISEWMGYFLLFENMLDSVLYARNKWLVDGGIVLPDKASLFLTAIEDSEYKEDKIEFWNSVYGF DMSCIKKKAMMEPLVDTVDQKQIVTDSRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGFS TGPKSRATHWKQTVMYLEDVLTICEGETITGSMSVSYNKKNPRDVDIKLSYSLDGQHSKISRTQHYKMR* |
| CDS seq | >BnaA03T0511300ZS ATGACGAAGAAGAACAACAACAACAACGAGGAGGAAGAAGAGTTCGTCAGCTTTGGACACAATCTGAACACGAAGATACG CTTCGAAGACGCTGATGAAGACGAAACTGCACAAGGCTCCGCTGAAGCCGCCACCGCCCAAGATGAACCCATGTGCGACG CCGCAGATATCACAACCGACGCCGCCGATGATACCACCAGCGCCGATTACTACTTCGACTCCTACTCTCACTTCGGGATT CATGAAGAGATGTTGAAGGATGTAGTGAGAACCAAGACTTACCAGAACGTGATTTACCAGAACAAGTTTCTCATCAAGGA CAAAGTTGTTCTTGATGTTGGTGCTGGGACAGGGATCTTGTCTCTCTTCTGCGCCAAGGCTGGAGCTAAACATGTCTACG CTGTTGAATGTTCTCAAATGGCTGACATGGCTAAGGAGATTGTCAAGGCCAATGGCTTTTCTGATGTTATAACGGTATTG AAAGGGAAGATTGAGGAGATAGAGCTTCCTACTCCTAAAGTGGATGTGATTATATCTGAGTGGATGGGTTACTTTTTGTT GTTTGAAAACATGTTGGACAGTGTCCTTTACGCTCGCAACAAATGGCTTGTTGATGGTGGGATTGTGTTACCAGACAAAG CCTCTCTCTTTCTTACAGCCATAGAGGATTCAGAGTATAAAGAAGACAAAATTGAATTTTGGAACAGTGTGTATGGTTTT GACATGTCATGCATCAAGAAAAAGGCTATGATGGAGCCGCTTGTTGACACCGTCGACCAAAAACAGATCGTCACTGATAG TAGGCTACTTAAGACGATGGATATCTCAAAGATGTCTTCTGGTGATGCTTCCTTCACTGCTCCCTTCAAACTTGTTGCAC AACGCAATGACTACATCCACGCCCTTGTAGCCTACTTTGACGTGTCGTTTACCATGTGCCACAAGCTTCTAGGCTTCTCA ACAGGACCGAAGTCACGGGCCACGCACTGGAAACAAACAGTCATGTACCTTGAAGATGTGTTAACAATATGTGAAGGTGA GACAATCACTGGAAGCATGTCGGTTTCTTATAACAAGAAGAATCCTAGAGACGTTGACATTAAGCTAAGCTATTCTTTGG ATGGTCAGCATTCAAAGATCTCAAGGACTCAACACTACAAAATGCGTTGA |
Bn_scaffoldA03:28552167-28552177:+ does not have available information here.