| Microexon ID | Bn_scaffoldA01:4277018-4277028:- |
| Species | Brassica Napus | Coordinates | scaffoldA01:4277018..4277028 |
| Microexon Cluster ID | MEP26 |
| Size | 11 |
| Phase | 1 |
| Pfam Domain Motif | PRMT5 |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GAATTCATGAA |
| Microexon Amino Acid seq | GIHE |
| Microexon-tag DNA Seq | GATGATACCACCAGCGCCGATTACTACTTCGATTCCTACTCTCACTTCGGAATTCATGAAGAGATGTTGAAGGATGTAGTGAGAACAAAGACTTATCAGAACGTAATT |
| Microexon-tag Amino Acid Seq | DDTTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
| Microexon-tag spanning region | 4276832-4277177 |
| Microexon-tag prediction score | 0.9825 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA01T0077000ZSx |
| Reference Transcript ID | BnaA01T0077000ZS |
| Gene ID | BnaA01G0077000ZS |
| Gene Name | NA |
| Transcript ID | BnaA01T0077000ZS |
| Protein ID | |
| Gene ID | BnaA01G0077000ZS |
| Gene Name | |
| Pfam domain motif | PRMT5 |
| Motif E-value | 0.001 |
| Motif start | 85 |
| Motif end | 186 |
| Protein seq | >BnaA01T0077000ZS MTKKNNNNNNEEEEFVSFGHNLNTKIRFEDADEDEVAEGSGFEAAQDESMCEAGESTDAAQVTDDTTSADYYFDSYSHFG IHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVGAGTGILSLFCAKAGAKHVYAVECSQMADMAKEIVKANGFSDVITV LKGKIEEIELPTPKVDVIISEWMGYFLLFENMLDSVLYARNKWLVDGGIVLPDKASLFLTAIEDSEYKEDKIEFWNSVYG FDMSCIKKKAMMEPLVDTVDQNQIVTDSKLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGF STGPRSRATHWKQTVMYLEDVLTICEGETITGSMSVSYNKKNPRDVDIKLSYSLNGQHSKVSRTQHYKMR* |
| CDS seq | >BnaA01T0077000ZS ATGACTAAGAAGAATAACAACAACAACAACGAGGAAGAAGAGTTCGTCAGCTTCGGACACAACCTGAACACGAAGATACG CTTCGAAGATGCTGATGAAGACGAAGTTGCAGAAGGCTCCGGTTTTGAAGCCGCTCAAGACGAATCAATGTGCGAAGCCG GAGAGAGCACCGATGCAGCTCAAGTCACTGATGATACCACCAGCGCCGATTACTACTTCGATTCCTACTCTCACTTCGGA ATTCATGAAGAGATGTTGAAGGATGTAGTGAGAACAAAGACTTATCAGAACGTAATTTACCAAAACAAGTTTCTCATCAA GGACAAGATTGTTCTTGATGTTGGAGCTGGGACAGGGATCTTGTCTCTCTTCTGTGCCAAGGCTGGAGCTAAACATGTCT ACGCTGTTGAATGTTCTCAAATGGCTGACATGGCAAAGGAGATTGTTAAAGCCAATGGATTTTCTGATGTTATAACGGTT TTGAAAGGGAAGATTGAAGAGATAGAGCTTCCCACTCCTAAAGTGGATGTGATTATATCTGAATGGATGGGTTACTTTTT GTTGTTTGAAAACATGTTGGACAGTGTCCTATACGCGCGCAACAAATGGCTTGTTGATGGTGGAATTGTGCTACCAGACA AAGCCTCTCTCTTTCTTACAGCAATTGAGGATTCAGAGTACAAAGAAGACAAAATTGAATTTTGGAACAGTGTGTATGGT TTTGACATGTCATGCATCAAGAAAAAAGCTATGATGGAACCGCTTGTCGACACAGTCGACCAAAACCAGATTGTCACCGA TAGTAAGCTACTTAAGACAATGGATATCTCGAAGATGTCTTCTGGTGATGCTTCCTTCACAGCTCCCTTTAAACTTGTTG CGCAACGCAATGACTACATCCACGCTCTTGTAGCCTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTTGGTTTC TCAACAGGACCGAGATCCCGAGCTACGCACTGGAAACAAACAGTCATGTACCTTGAAGATGTGTTAACAATATGTGAGGG TGAGACAATTACTGGAAGCATGTCTGTTTCGTACAACAAGAAGAATCCTAGAGACGTTGACATCAAGCTAAGCTATTCTT TGAATGGCCAGCACTCCAAGGTCTCAAGGACTCAACACTACAAAATGCGCTGA |
Bn_scaffoldA01:4277018-4277028:- does not have available information here.