
Microexon ID | At_4:14492072-14492082:+ |
Species | Arabidopsis thaliana | Coordinates | 4:14492072..14492082 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAATCCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATACCACCAGTGCCGATTACTACTTCGATTCTTACTCTCACTTTGGAATCCATGAAGAGATGTTGAAGGATGTTGTGAGAACAAAGACTTATCAGAATGTTATT |
Microexon-tag Amino Acid Seq | DDTTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Microexon-tag spanning region | 14491928-14492252 |
Microexon-tag prediction score | 0.9774 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT4G29510.1x |
Reference Transcript ID | AT4G29510.1 |
Gene ID | AT4G29510 |
Gene Name | PRMT11 |
Transcript ID | AT4G29510.1 |
Protein ID | AT4G29510.1 |
Gene ID | AT4G29510 |
Gene Name | PRMT11 |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00081 |
Motif start | 84 |
Motif end | 186 |
Protein seq | >AT4G29510.1 MTKNSNHDENEFISFEPNQNTKIRFEDADEDEVAEGSGVAGEETPQDESMFDAGESADTAEVTDDTTSADYYFDSYSHFG IHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADMAKEIVKANGFSDVITV LKGKIEEIELPTPKVDVIISEWMGYFLLFENMLDSVLYARDKWLVEGGVVLPDKASLHLTAIEDSEYKEDKIEFWNSVYG FDMSCIKKKAMMEPLVDTVDQNQIVTDSRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGF STGPKSRATHWKQTVLYLEDVLTICEGETITGTMSVSPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR* |
CDS seq | >AT4G29510.1 ATGACTAAGAACAGTAACCACGACGAGAATGAGTTCATCAGCTTTGAACCAAATCAGAACACGAAGATACGCTTTGAAGA TGCTGATGAAGACGAAGTTGCTGAAGGGTCTGGTGTTGCCGGCGAGGAAACTCCCCAAGATGAGTCCATGTTCGACGCCG GAGAGAGCGCCGACACCGCTGAAGTAACTGATGATACCACCAGTGCCGATTACTACTTCGATTCTTACTCTCACTTTGGA ATCCATGAAGAGATGTTGAAGGATGTTGTGAGAACAAAGACTTATCAGAATGTTATTTATCAGAACAAGTTTCTTATCAA GGACAAAATTGTTCTTGATGTTGGAGCTGGAACCGGAATTTTGTCTCTGTTCTGTGCCAAGGCAGGAGCTGCTCATGTCT ACGCTGTTGAGTGTTCTCAAATGGCTGACATGGCAAAGGAGATTGTTAAAGCTAATGGATTTTCTGATGTTATTACGGTA TTGAAAGGGAAGATTGAGGAGATAGAGCTTCCCACTCCTAAAGTGGATGTGATTATATCGGAATGGATGGGTTACTTTTT GTTGTTTGAAAATATGTTGGACAGTGTCTTGTATGCTCGTGATAAATGGCTTGTTGAAGGTGGAGTTGTGCTACCAGACA AAGCCTCTCTGCATCTTACAGCCATAGAGGATTCAGAGTACAAAGAAGACAAAATCGAATTTTGGAACAGTGTGTATGGT TTTGACATGTCATGTATTAAGAAAAAAGCTATGATGGAACCACTTGTTGACACAGTCGACCAAAACCAAATCGTCACCGA TAGTAGGCTTCTAAAGACGATGGATATCTCAAAGATGTCCTCTGGTGATGCTTCCTTCACAGCTCCCTTTAAGCTTGTTG CACAACGCAATGACTACATCCACGCCCTTGTAGCCTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTGGGCTTC TCAACAGGACCGAAATCCCGAGCTACACACTGGAAACAAACAGTTCTGTATCTAGAAGATGTGTTAACCATATGTGAGGG TGAGACAATCACTGGAACTATGTCCGTTTCTCCTAACAAGAAGAATCCTCGAGACATTGACATAAAGCTAAGCTATTCTT TGAATGGCCAGCATTGCAAGATCTCAAGGACCCAACACTACAAAATGCGTTAA |
Microexon DNA seq | GAATCCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGATACCACCAGTGCCGATTACTACTTCGATTCTTACTCTCACTTTGGAATCCATGAAGAGATGTTGAAGGATGTTGTGAGAACAAAGACTTATCAGAATGTTATT |
Microexon-tag Amino Acid seq | DDTTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVI |
Transcript ID | AT4G29510.1 |
Gene ID | At.20452 |
Gene Name | PRMT11 |
Pfam domain motif | PRMT5 |
Motif E-value | 0.00081 |
Motif start | 84 |
Motif end | 186 |
Protein seq | >AT4G29510.1 MTKNSNHDENEFISFEPNQNTKIRFEDADEDEVAEGSGVAGEETPQDESMFDAGESADTAEVTDDTTSADYYFDSYSHFG IHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADMAKEIVKANGFSDVITV LKGKIEEIELPTPKVDVIISEWMGYFLLFENMLDSVLYARDKWLVEGGVVLPDKASLHLTAIEDSEYKEDKIEFWNSVYG FDMSCIKKKAMMEPLVDTVDQNQIVTDSRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVSFTMCHKLLGF STGPKSRATHWKQTVLYLEDVLTICEGETITGTMSVSPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR* |
CDS seq | >AT4G29510.1 ATGACTAAGAACAGTAACCACGACGAGAATGAGTTCATCAGCTTTGAACCAAATCAGAACACGAAGATACGCTTTGAAGA TGCTGATGAAGACGAAGTTGCTGAAGGGTCTGGTGTTGCCGGCGAGGAAACTCCCCAAGATGAGTCCATGTTCGACGCCG GAGAGAGCGCCGACACCGCTGAAGTAACTGATGATACCACCAGTGCCGATTACTACTTCGATTCTTACTCTCACTTTGGA ATCCATGAAGAGATGTTGAAGGATGTTGTGAGAACAAAGACTTATCAGAATGTTATTTATCAGAACAAGTTTCTTATCAA GGACAAAATTGTTCTTGATGTTGGAGCTGGAACCGGAATTTTGTCTCTGTTCTGTGCCAAGGCAGGAGCTGCTCATGTCT ACGCTGTTGAGTGTTCTCAAATGGCTGACATGGCAAAGGAGATTGTTAAAGCTAATGGATTTTCTGATGTTATTACGGTA TTGAAAGGGAAGATTGAGGAGATAGAGCTTCCCACTCCTAAAGTGGATGTGATTATATCGGAATGGATGGGTTACTTTTT GTTGTTTGAAAATATGTTGGACAGTGTCTTGTATGCTCGTGATAAATGGCTTGTTGAAGGTGGAGTTGTGCTACCAGACA AAGCCTCTCTGCATCTTACAGCCATAGAGGATTCAGAGTACAAAGAAGACAAAATCGAATTTTGGAACAGTGTGTATGGT TTTGACATGTCATGTATTAAGAAAAAAGCTATGATGGAACCACTTGTTGACACAGTCGACCAAAACCAAATCGTCACCGA TAGTAGGCTTCTAAAGACGATGGATATCTCAAAGATGTCCTCTGGTGATGCTTCCTTCACAGCTCCCTTTAAGCTTGTTG CACAACGCAATGACTACATCCACGCCCTTGTAGCCTACTTTGATGTATCGTTTACCATGTGCCACAAGCTGCTGGGCTTC TCAACAGGACCGAAATCCCGAGCTACACACTGGAAACAAACAGTTCTGTATCTAGAAGATGTGTTAACCATATGTGAGGG TGAGACAATCACTGGAACTATGTCCGTTTCTCCTAACAAGAAGAATCCTCGAGACATTGACATAAAGCTAAGCTATTCTT TGAATGGCCAGCATTGCAAGATCTCAAGGACCCAACACTACAAAATGCGTTAA |