
Microexon ID | At_2:8500838-8500848:- |
Species | Arabidopsis thaliana | Coordinates | 2:8500838..8500848 |
Microexon Cluster ID | MEP26 |
Size | 11 |
Phase | 1 |
Pfam Domain Motif | PRMT5 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,11,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATT |
Microexon-tag Amino Acid Seq | DDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVI |
Microexon-tag spanning region | 8500688-8500997 |
Microexon-tag prediction score | 0.9662 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G19670.1x |
Reference Transcript ID | AT2G19670.1 |
Gene ID | AT2G19670 |
Gene Name | PRMT12 |
Transcript ID | AT2G19670.1 |
Protein ID | AT2G19670.1 |
Gene ID | AT2G19670 |
Gene Name | PRMT12 |
Pfam domain motif | PRMT5 |
Motif E-value | 0.0016 |
Motif start | 61 |
Motif end | 162 |
Protein seq | >AT2G19670.1 MTSTENNNNGSDETQTTKLHFEDADESMHDGDDNNADVADDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVIYKNKF LIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADTAKEIVKSNGFSDVITVLKGKIEEIELPVPKVDVIISEWMG YFLLYENMLDTVLYARNKWLVDGGIVLPDKASLYVTAIEDAHYKDDKVEFWDDVYGFDMSCIKRRAITEPLVDTVDGNQI VTDSKLLKTMDISKMAAGDASFTAPFKLVAQRNDHIHALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTI CEGETITGSMTIAQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR* |
CDS seq | >AT2G19670.1 ATGACTAGTACGGAGAACAACAACAACGGCTCTGATGAAACTCAGACGACGAAGTTACACTTCGAGGATGCTGATGAATC AATGCACGATGGAGATGACAACAATGCCGATGTTGCTGATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTC ATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATTTACAAGAACAAGTTT CTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTCTCTCTTCTGTGCTAAAGCAGGAGCAGC TCACGTTTACGCAGTTGAGTGTTCTCAAATGGCTGACACAGCAAAGGAGATTGTTAAGTCGAATGGATTCTCAGATGTTA TAACGGTTTTGAAAGGGAAGATTGAGGAGATCGAACTTCCAGTTCCTAAAGTGGATGTGATTATCTCTGAATGGATGGGT TACTTTCTGTTGTATGAAAATATGCTTGACACCGTCTTGTATGCTCGCAATAAATGGCTTGTTGATGGTGGAATTGTTCT ACCAGATAAAGCTTCTCTTTATGTTACTGCCATTGAGGATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGACG TGTATGGGTTTGACATGTCGTGCATCAAGAGAAGAGCAATTACAGAACCGCTTGTTGACACCGTTGATGGTAACCAAATC GTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTGCTGGAGATGCTTCCTTCACAGCTCCGTTTAA GCTCGTCGCACAACGAAATGACCATATCCATGCCCTTGTAGCCTACTTCGATGTGTCATTCACTATGTGTCACAAGAAGA TGGGTTTCTCAACAGGACCGAAATCGCGGGCTACGCATTGGAAACAAACTGTGCTGTACCTGGAAGATGTGTTAACCATA TGCGAGGGTGAAACAATCACAGGAAGCATGACCATTGCACAAAACAAAAAGAATCCCAGAGACGTCGACATAAAGCTCAG CTATTCTTTGAACGGCCAACATTGCAATATCTCAAGGACCCACTTCTATAAGATGCGCTAA |
Microexon DNA seq | GTATTCATGAA |
Microexon Amino Acid seq | GIHE |
Microexon-tag DNA Seq | GATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATT |
Microexon-tag Amino Acid seq | DDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVI |
Transcript ID | AT2G19670.1 |
Gene ID | At.8667 |
Gene Name | PRMT12 |
Pfam domain motif | PRMT5 |
Motif E-value | 0.0016 |
Motif start | 61 |
Motif end | 162 |
Protein seq | >AT2G19670.1 MTSTENNNNGSDETQTTKLHFEDADESMHDGDDNNADVADDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVIYKNKF LIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADTAKEIVKSNGFSDVITVLKGKIEEIELPVPKVDVIISEWMG YFLLYENMLDTVLYARNKWLVDGGIVLPDKASLYVTAIEDAHYKDDKVEFWDDVYGFDMSCIKRRAITEPLVDTVDGNQI VTDSKLLKTMDISKMAAGDASFTAPFKLVAQRNDHIHALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTI CEGETITGSMTIAQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR* |
CDS seq | >AT2G19670.1 ATGACTAGTACGGAGAACAACAACAACGGCTCTGATGAAACTCAGACGACGAAGTTACACTTCGAGGATGCTGATGAATC AATGCACGATGGAGATGACAACAATGCCGATGTTGCTGATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTC ATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATTTACAAGAACAAGTTT CTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTCTCTCTTCTGTGCTAAAGCAGGAGCAGC TCACGTTTACGCAGTTGAGTGTTCTCAAATGGCTGACACAGCAAAGGAGATTGTTAAGTCGAATGGATTCTCAGATGTTA TAACGGTTTTGAAAGGGAAGATTGAGGAGATCGAACTTCCAGTTCCTAAAGTGGATGTGATTATCTCTGAATGGATGGGT TACTTTCTGTTGTATGAAAATATGCTTGACACCGTCTTGTATGCTCGCAATAAATGGCTTGTTGATGGTGGAATTGTTCT ACCAGATAAAGCTTCTCTTTATGTTACTGCCATTGAGGATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGACG TGTATGGGTTTGACATGTCGTGCATCAAGAGAAGAGCAATTACAGAACCGCTTGTTGACACCGTTGATGGTAACCAAATC GTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTGCTGGAGATGCTTCCTTCACAGCTCCGTTTAA GCTCGTCGCACAACGAAATGACCATATCCATGCCCTTGTAGCCTACTTCGATGTGTCATTCACTATGTGTCACAAGAAGA TGGGTTTCTCAACAGGACCGAAATCGCGGGCTACGCATTGGAAACAAACTGTGCTGTACCTGGAAGATGTGTTAACCATA TGCGAGGGTGAAACAATCACAGGAAGCATGACCATTGCACAAAACAAAAAGAATCCCAGAGACGTCGACATAAAGCTCAG CTATTCTTTGAACGGCCAACATTGCAATATCTCAAGGACCCACTTCTATAAGATGCGCTAA |