Microexon ID At_2:8500838-8500848:-
Species Arabidopsis thaliana
Coordinates 2:8500838..8500848
Microexon Cluster ID MEP26
Size 11
Phase 1
Pfam Domain Motif PRMT5
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,11,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq RRYGAYAARACCAGYGCYGAYTAYTACTTCGAYTCCTACTCYCAYTTYGGTATTCATGAAGAAATGYTGAARGATRYWGTGAGRACWAARACWTAYCAAAATGTTATY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATT
Microexon-tag Amino Acid Seq DDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVI
Microexon-tag spanning region8500688-8500997
Microexon-tag prediction score0.9662
Overlapped with the annotated transcript (%) 100
New Transcript ID AT2G19670.1x
Reference Transcript ID AT2G19670.1
Gene ID AT2G19670
Gene Name PRMT12
Transcript ID AT2G19670.1
Protein ID AT2G19670.1
Gene ID AT2G19670
Gene Name PRMT12
Pfam domain motif PRMT5
Motif E-value 0.0016
Motif start 61
Motif end 162
Protein seq >AT2G19670.1
MTSTENNNNGSDETQTTKLHFEDADESMHDGDDNNADVADDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVIYKNKF
LIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADTAKEIVKSNGFSDVITVLKGKIEEIELPVPKVDVIISEWMG
YFLLYENMLDTVLYARNKWLVDGGIVLPDKASLYVTAIEDAHYKDDKVEFWDDVYGFDMSCIKRRAITEPLVDTVDGNQI
VTDSKLLKTMDISKMAAGDASFTAPFKLVAQRNDHIHALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTI
CEGETITGSMTIAQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR*
CDS seq >AT2G19670.1
ATGACTAGTACGGAGAACAACAACAACGGCTCTGATGAAACTCAGACGACGAAGTTACACTTCGAGGATGCTGATGAATC
AATGCACGATGGAGATGACAACAATGCCGATGTTGCTGATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTC
ATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATTTACAAGAACAAGTTT
CTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTCTCTCTTCTGTGCTAAAGCAGGAGCAGC
TCACGTTTACGCAGTTGAGTGTTCTCAAATGGCTGACACAGCAAAGGAGATTGTTAAGTCGAATGGATTCTCAGATGTTA
TAACGGTTTTGAAAGGGAAGATTGAGGAGATCGAACTTCCAGTTCCTAAAGTGGATGTGATTATCTCTGAATGGATGGGT
TACTTTCTGTTGTATGAAAATATGCTTGACACCGTCTTGTATGCTCGCAATAAATGGCTTGTTGATGGTGGAATTGTTCT
ACCAGATAAAGCTTCTCTTTATGTTACTGCCATTGAGGATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGACG
TGTATGGGTTTGACATGTCGTGCATCAAGAGAAGAGCAATTACAGAACCGCTTGTTGACACCGTTGATGGTAACCAAATC
GTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTGCTGGAGATGCTTCCTTCACAGCTCCGTTTAA
GCTCGTCGCACAACGAAATGACCATATCCATGCCCTTGTAGCCTACTTCGATGTGTCATTCACTATGTGTCACAAGAAGA
TGGGTTTCTCAACAGGACCGAAATCGCGGGCTACGCATTGGAAACAAACTGTGCTGTACCTGGAAGATGTGTTAACCATA
TGCGAGGGTGAAACAATCACAGGAAGCATGACCATTGCACAAAACAAAAAGAATCCCAGAGACGTCGACATAAAGCTCAG
CTATTCTTTGAACGGCCAACATTGCAATATCTCAAGGACCCACTTCTATAAGATGCGCTAA
Microexon DNA seq GTATTCATGAA
Microexon Amino Acid seq GIHE
Microexon-tag DNA Seq GATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTCATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATT
Microexon-tag Amino Acid seq DDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVI
Transcript ID AT2G19670.1
Gene ID At.8667
Gene Name PRMT12
Pfam domain motif PRMT5
Motif E-value 0.0016
Motif start 61
Motif end 162
Protein seq >AT2G19670.1
MTSTENNNNGSDETQTTKLHFEDADESMHDGDDNNADVADDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVIYKNKF
LIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADTAKEIVKSNGFSDVITVLKGKIEEIELPVPKVDVIISEWMG
YFLLYENMLDTVLYARNKWLVDGGIVLPDKASLYVTAIEDAHYKDDKVEFWDDVYGFDMSCIKRRAITEPLVDTVDGNQI
VTDSKLLKTMDISKMAAGDASFTAPFKLVAQRNDHIHALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTI
CEGETITGSMTIAQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR*
CDS seq >AT2G19670.1
ATGACTAGTACGGAGAACAACAACAACGGCTCTGATGAAACTCAGACGACGAAGTTACACTTCGAGGATGCTGATGAATC
AATGCACGATGGAGATGACAACAATGCCGATGTTGCTGATGACATTACCAGCGCCGATTACTACTTCGATTCTTACTCTC
ATTTCGGTATTCATGAAGAAATGTTAAAGGATGTAGTGAGGACAAAGAGTTATCAAGATGTTATTTACAAGAACAAGTTT
CTTATCAAGGACAAAATTGTTCTTGATGTTGGAGCTGGAACTGGAATCTTGTCTCTCTTCTGTGCTAAAGCAGGAGCAGC
TCACGTTTACGCAGTTGAGTGTTCTCAAATGGCTGACACAGCAAAGGAGATTGTTAAGTCGAATGGATTCTCAGATGTTA
TAACGGTTTTGAAAGGGAAGATTGAGGAGATCGAACTTCCAGTTCCTAAAGTGGATGTGATTATCTCTGAATGGATGGGT
TACTTTCTGTTGTATGAAAATATGCTTGACACCGTCTTGTATGCTCGCAATAAATGGCTTGTTGATGGTGGAATTGTTCT
ACCAGATAAAGCTTCTCTTTATGTTACTGCCATTGAGGATGCTCATTATAAAGACGACAAAGTAGAGTTTTGGGACGACG
TGTATGGGTTTGACATGTCGTGCATCAAGAGAAGAGCAATTACAGAACCGCTTGTTGACACCGTTGATGGTAACCAAATC
GTGACTGATAGCAAGCTGCTGAAGACAATGGATATCTCTAAGATGGCTGCTGGAGATGCTTCCTTCACAGCTCCGTTTAA
GCTCGTCGCACAACGAAATGACCATATCCATGCCCTTGTAGCCTACTTCGATGTGTCATTCACTATGTGTCACAAGAAGA
TGGGTTTCTCAACAGGACCGAAATCGCGGGCTACGCATTGGAAACAAACTGTGCTGTACCTGGAAGATGTGTTAACCATA
TGCGAGGGTGAAACAATCACAGGAAGCATGACCATTGCACAAAACAAAAAGAATCCCAGAGACGTCGACATAAAGCTCAG
CTATTCTTTGAACGGCCAACATTGCAATATCTCAAGGACCCACTTCTATAAGATGCGCTAA