
Microexon ID | Ta_7D:116889439-116889448:- |
Species | Triticum Aestivum | Coordinates | 7D:116889439..116889448 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGAGCCGCTGCGTCACCCTCTTCCCGCTCTGGATGCCTCCAAACATGATCACACTCATGGGATTTATGTTTCTACTTACATCTTCGCTGCTTAGC |
Microexon-tag Amino Acid Seq | LQPFWSRCVTLFPLWMPPNMITLMGFMFLLTSSLLS |
Microexon-tag spanning region | 116889305-116890698 |
Microexon-tag prediction score | 0.973 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS7D02G166300.1x |
Reference Transcript ID | TraesCS7D02G166300.1 |
Gene ID | TraesCS7D02G166300 |
Gene Name | NA |
Transcript ID | TraesCS7D02G166300.1 |
Protein ID | |
Gene ID | TraesCS7D02G166300 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 1.90E-07 |
Motif start | 46 |
Motif end | 150 |
Protein seq | >TraesCS7D02G166300.1 MVYIGAHGVETLKRYRYSGQDHSVVAKYVLQPFWSRCVTLFPLWMPPNMITLMGFMFLLTSSLLSYIYSPHLDTAPPRWV HLAHGILLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGRLTFCYWVVAAVPFYLATWEHY FTNTLILPVINGPTEGLMLIYVSHLFTFFTGAEWWAQDFRKSLPLISLVPLPFVPEIPLYVIVLILMIMFAVIPTVGSNI GNVQKVVDARKGSMELALAMLLPFIALLAGVAVWCYLSPSDIMKNQPHLLVIGTGSAFGYLVGRMILAHLCDEPKGLKTG MCMALVFLPFAIANALTAKINNGTPLADELLVILLYCATSVGLYMHLAISVCHEIKDALGIYCFRIARKEA* |
CDS seq | >TraesCS7D02G166300.1 ATGGTGTACATCGGCGCGCACGGCGTGGAGACGCTGAAGCGCTACAGGTACAGCGGCCAGGACCACTCGGTGGTGGCCAA GTACGTGCTCCAGCCCTTCTGGAGCCGCTGCGTCACCCTCTTCCCGCTCTGGATGCCTCCAAACATGATCACACTCATGG GATTTATGTTTCTACTTACATCTTCGCTGCTTAGCTATATTTATTCACCCCACCTTGACACAGCTCCCCCTCGGTGGGTC CATCTTGCCCATGGAATACTTCTCTTCTTGTACCAGACTTTTGATGCCGTTGATGGTAAACAAGCAAGGCGCACCAGCTC ATCAAGTCCTCTAGGAGAACTTTTTGATCATGGATGTGATGCCCTTGCCTGCGCTTTTGAAGCCTTGGCCCTTGGAAGCA CCTTGATGTGTGGAAGGTTGACATTCTGTTATTGGGTGGTTGCTGCTGTCCCATTTTATCTGGCAACATGGGAACACTAC TTCACAAATACTCTTATTCTTCCTGTAATAAATGGACCAACGGAAGGCCTGATGCTGATCTATGTCTCCCACCTTTTTAC CTTTTTTACTGGTGCTGAATGGTGGGCGCAAGATTTTCGAAAATCCCTCCCTCTTATTAGTTTGGTTCCACTTCCATTTG TTCCAGAAATCCCCTTGTATGTTATCGTGCTGATTCTGATGATCATGTTTGCTGTAATCCCAACAGTTGGATCCAATATT GGTAATGTCCAAAAAGTAGTTGATGCACGGAAAGGGAGCATGGAATTAGCATTAGCGATGCTCCTTCCATTTATTGCGCT GTTAGCTGGAGTTGCTGTCTGGTGTTATCTCTCTCCTTCAGATATCATGAAGAACCAGCCACATCTGCTTGTGATTGGAA CTGGTTCTGCTTTTGGATATTTGGTTGGAAGGATGATACTTGCTCATTTGTGTGACGAGCCCAAAGGTCTAAAAACAGGA ATGTGCATGGCTCTGGTGTTTCTTCCTTTTGCTATCGCAAATGCTCTCACCGCAAAGATTAACAATGGGACTCCTTTGGC TGACGAGCTTTTGGTTATTCTTCTGTATTGTGCAACCTCAGTGGGTCTTTACATGCATCTCGCCATTTCGGTTTGTCATG AAATCAAGGATGCTCTTGGAATATATTGCTTCAGGATAGCCAGAAAAGAGGCTTGA |
Ta_7D:116889439-116889448:- does not have available information here.