Microexon ID Ta_6D:35630473-35630482:-
Species Triticum   Aestivum
Coordinates 6D:35630473..35630482
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCAAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq CTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCAAACATGATCACGCTGACAGGTTTCATGTTTCTGCTGACATCGGCATTCCTTGGC
Microexon-tag Amino Acid Seq LQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSAFLG
Microexon-tag spanning region35630344-35631369
Microexon-tag prediction score0.9651
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS6D02G070500.1x
Reference Transcript ID TraesCS6D02G070500.1
Gene ID TraesCS6D02G070500
Gene Name TaAAPT2
Transcript ID TraesCS6D02G070500.1
Protein ID
Gene ID TraesCS6D02G070500
Gene Name
Pfam domain motif CDP-OH_P_transf
Motif E-value 3.20E-09
Motif start 47
Motif end 156
Protein seq >TraesCS6D02G070500.1
MGYVGSHGVATLRKYKYSGVDHSIVAKYILQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSAFLGFLYSPHLDTAPPRWV
HLAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACTFESLAFGSTAMCGNATFWFWVISAVPFYFATWEHY
FTNTLVLPIVNGPTEGLMLIYVCHIFTFFTGAEWWAQDFRKSVPLLNWVPLVPEISLYGIVLFLMIAFAVIPTIGSNTHN
VYKVVEARKGSMVLALAMLFPFGLLMAGTLVWSYLSPSDIMRNQPHLLIIGTGFAFGYLVGRMILAHLCDEPKGLKTGMC
MALAYFPFAIANALTARLDDGNPLFDEQLVLLIYCLFTVALYMHFATSVVHEITNALGIHCFRITRKKA*
CDS seq >TraesCS6D02G070500.1
ATGGGGTACGTCGGGAGCCACGGCGTGGCGACGCTGCGCAAGTACAAGTACAGCGGCGTCGACCACTCCATCGTCGCCAA
GTACATCCTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCAAACATGATCACGCTGACAG
GTTTCATGTTTCTGCTGACATCGGCATTCCTTGGCTTTTTGTATTCACCTCATCTCGATACAGCGCCCCCTAGATGGGTT
CATCTTGCACATGGAATCCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGGCGTACGAACTC
ATCAAGTCCTTTAGGCGAACTTTTTGATCACGGATGCGACGCGCTTGCATGTACTTTTGAGTCCCTGGCTTTTGGGAGCA
CTGCTATGTGTGGAAATGCTACCTTCTGGTTTTGGGTCATTTCGGCTGTCCCCTTCTACTTCGCAACCTGGGAACACTAT
TTTACAAACACACTTGTTCTTCCTATAGTCAATGGGCCAACTGAAGGCCTTATGCTGATCTATGTGTGCCATATCTTCAC
CTTTTTCACAGGAGCTGAATGGTGGGCGCAGGATTTCCGGAAATCAGTGCCCCTCCTTAATTGGGTGCCTCTTGTTCCTG
AAATCTCGCTGTATGGCATTGTGCTGTTTCTAATGATTGCTTTTGCTGTAATTCCGACAATTGGATCTAACACTCACAAT
GTTTACAAAGTCGTCGAAGCAAGAAAAGGAAGCATGGTGCTGGCCCTAGCAATGCTCTTCCCTTTCGGTTTACTCATGGC
TGGAACTCTCGTGTGGTCCTATCTATCTCCTTCAGATATAATGAGAAATCAACCACATCTGCTAATCATTGGAACTGGTT
TTGCGTTTGGCTATCTTGTGGGAAGAATGATTCTGGCTCACTTATGTGATGAACCCAAAGGTCTGAAGACAGGAATGTGC
ATGGCCCTGGCATATTTTCCGTTTGCGATTGCAAATGCGTTGACTGCCCGACTTGATGATGGAAACCCCCTTTTTGATGA
GCAGCTCGTTCTCCTGATATACTGCTTATTTACAGTGGCGTTGTACATGCATTTTGCTACGTCTGTTGTCCATGAAATCA
CCAACGCACTTGGGATTCATTGCTTCAGAATCACAAGGAAAAAGGCGTAA
Ta_6D:35630473-35630482:- does not have available information here.