
Microexon ID | Ta_6D:35630473-35630482:- |
Species | Triticum Aestivum | Coordinates | 6D:35630473..35630482 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCAAACATGATCACGCTGACAGGTTTCATGTTTCTGCTGACATCGGCATTCCTTGGC |
Microexon-tag Amino Acid Seq | LQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSAFLG |
Microexon-tag spanning region | 35630344-35631369 |
Microexon-tag prediction score | 0.9651 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS6D02G070500.1x |
Reference Transcript ID | TraesCS6D02G070500.1 |
Gene ID | TraesCS6D02G070500 |
Gene Name | TaAAPT2 |
Transcript ID | TraesCS6D02G070500.1 |
Protein ID | |
Gene ID | TraesCS6D02G070500 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 3.20E-09 |
Motif start | 47 |
Motif end | 156 |
Protein seq | >TraesCS6D02G070500.1 MGYVGSHGVATLRKYKYSGVDHSIVAKYILQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSAFLGFLYSPHLDTAPPRWV HLAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACTFESLAFGSTAMCGNATFWFWVISAVPFYFATWEHY FTNTLVLPIVNGPTEGLMLIYVCHIFTFFTGAEWWAQDFRKSVPLLNWVPLVPEISLYGIVLFLMIAFAVIPTIGSNTHN VYKVVEARKGSMVLALAMLFPFGLLMAGTLVWSYLSPSDIMRNQPHLLIIGTGFAFGYLVGRMILAHLCDEPKGLKTGMC MALAYFPFAIANALTARLDDGNPLFDEQLVLLIYCLFTVALYMHFATSVVHEITNALGIHCFRITRKKA* |
CDS seq | >TraesCS6D02G070500.1 ATGGGGTACGTCGGGAGCCACGGCGTGGCGACGCTGCGCAAGTACAAGTACAGCGGCGTCGACCACTCCATCGTCGCCAA GTACATCCTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCAAACATGATCACGCTGACAG GTTTCATGTTTCTGCTGACATCGGCATTCCTTGGCTTTTTGTATTCACCTCATCTCGATACAGCGCCCCCTAGATGGGTT CATCTTGCACATGGAATCCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGGCGTACGAACTC ATCAAGTCCTTTAGGCGAACTTTTTGATCACGGATGCGACGCGCTTGCATGTACTTTTGAGTCCCTGGCTTTTGGGAGCA CTGCTATGTGTGGAAATGCTACCTTCTGGTTTTGGGTCATTTCGGCTGTCCCCTTCTACTTCGCAACCTGGGAACACTAT TTTACAAACACACTTGTTCTTCCTATAGTCAATGGGCCAACTGAAGGCCTTATGCTGATCTATGTGTGCCATATCTTCAC CTTTTTCACAGGAGCTGAATGGTGGGCGCAGGATTTCCGGAAATCAGTGCCCCTCCTTAATTGGGTGCCTCTTGTTCCTG AAATCTCGCTGTATGGCATTGTGCTGTTTCTAATGATTGCTTTTGCTGTAATTCCGACAATTGGATCTAACACTCACAAT GTTTACAAAGTCGTCGAAGCAAGAAAAGGAAGCATGGTGCTGGCCCTAGCAATGCTCTTCCCTTTCGGTTTACTCATGGC TGGAACTCTCGTGTGGTCCTATCTATCTCCTTCAGATATAATGAGAAATCAACCACATCTGCTAATCATTGGAACTGGTT TTGCGTTTGGCTATCTTGTGGGAAGAATGATTCTGGCTCACTTATGTGATGAACCCAAAGGTCTGAAGACAGGAATGTGC ATGGCCCTGGCATATTTTCCGTTTGCGATTGCAAATGCGTTGACTGCCCGACTTGATGATGGAAACCCCCTTTTTGATGA GCAGCTCGTTCTCCTGATATACTGCTTATTTACAGTGGCGTTGTACATGCATTTTGCTACGTCTGTTGTCCATGAAATCA CCAACGCACTTGGGATTCATTGCTTCAGAATCACAAGGAAAAAGGCGTAA |
Ta_6D:35630473-35630482:- does not have available information here.