
Microexon ID | Ta_6A:39504771-39504780:- |
Species | Triticum Aestivum | Coordinates | 6A:39504771..39504780 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCCAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCCAACATGATCACGCTGACAGGTTTCATGTTTCTGCTGACATCGGCATTGCTTGGC |
Microexon-tag Amino Acid Seq | LQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSALLG |
Microexon-tag spanning region | 39504639-39505656 |
Microexon-tag prediction score | 0.9659 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS6A02G072500.1x |
Reference Transcript ID | TraesCS6A02G072500.1 |
Gene ID | TraesCS6A02G072500 |
Gene Name | NA |
Transcript ID | TraesCS6A02G072500.1 |
Protein ID | |
Gene ID | TraesCS6A02G072500 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 7.20E-10 |
Motif start | 47 |
Motif end | 151 |
Protein seq | >TraesCS6A02G072500.1 MGYVGSHGVATLRKYKYSGVDHSIVAKYILQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSALLGFLYSPHLDTAPPRWV HLAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGNATFWFWVISAVPFYFATWEHY FTNTLVLPIVNGPTEGLMLIYVCHIVTFFTGAEWWAQDFRKSVPLLNWVPLVPEISLYGIVLFLMIAFAVIPTIGSNTHN VYKVVEARKGSMVLALAMLFPFVVLMAGTLVWSYLSPSDIMRNQPHLLIIGTGFAFGYLVGRMILAHLCDEPKGLKTGMC MALAYFPFAIANALTARLDDGNPLFDEQLVLLIYCLFTVALYMHFATSVIHEITNALGIHCFRITRKKA* |
CDS seq | >TraesCS6A02G072500.1 ATGGGGTACGTCGGGAGCCACGGCGTGGCGACGCTGCGCAAGTACAAGTACAGCGGCGTCGACCACTCCATCGTCGCCAA GTACATCCTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCCAACATGATCACGCTGACAG GTTTCATGTTTCTGCTGACATCGGCATTGCTTGGCTTTTTGTATTCACCTCATCTTGATACAGCGCCCCCTAGATGGGTT CATCTTGCGCACGGAATCCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTC ATCAAGTCCTTTAGGCGAACTTTTTGATCACGGATGTGACGCGCTTGCATGTGCTTTTGAGTCCCTGGCTTTTGGGAGCA CAGCTATGTGTGGAAATGCTACCTTCTGGTTTTGGGTCATTTCAGCTGTCCCCTTCTACTTCGCAACCTGGGAACACTAT TTTACAAATACACTTGTTCTTCCTATAGTCAATGGGCCGACTGAAGGCCTTATGCTGATCTATGTGTGCCATATCGTCAC CTTTTTCACAGGAGCTGAATGGTGGGCACAGGATTTCCGAAAATCAGTGCCCCTCCTTAATTGGGTGCCTCTTGTTCCTG AAATCTCGCTCTATGGCATTGTGCTGTTTCTAATGATTGCTTTTGCTGTAATTCCGACAATTGGATCTAACACTCACAAT GTTTACAAAGTCGTCGAAGCAAGAAAAGGAAGTATGGTGCTGGCACTAGCAATGCTCTTCCCTTTCGTTGTACTCATGGC TGGAACTCTCGTGTGGTCCTATCTATCTCCTTCAGATATAATGAGAAATCAACCACATCTGCTAATTATTGGAACTGGTT TTGCGTTTGGCTATCTTGTGGGAAGAATGATTCTGGCTCACTTATGTGATGAACCCAAAGGTCTGAAGACAGGAATGTGC ATGGCCCTGGCATATTTCCCGTTTGCAATTGCAAATGCGCTGACTGCCCGACTTGATGATGGAAACCCCCTTTTTGATGA GCAGCTCGTTCTCCTGATATACTGCTTATTTACAGTGGCGCTGTACATGCATTTTGCTACGTCTGTTATCCATGAAATCA CCAACGCACTTGGGATTCATTGCTTCAGAATCACAAGGAAAAAGGCGTAA |
Ta_6A:39504771-39504780:- does not have available information here.