Microexon ID Ta_6A:39504771-39504780:-
Species Triticum   Aestivum
Coordinates 6A:39504771..39504780
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCCAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq CTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCCAACATGATCACGCTGACAGGTTTCATGTTTCTGCTGACATCGGCATTGCTTGGC
Microexon-tag Amino Acid Seq LQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSALLG
Microexon-tag spanning region39504639-39505656
Microexon-tag prediction score0.9659
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS6A02G072500.1x
Reference Transcript ID TraesCS6A02G072500.1
Gene ID TraesCS6A02G072500
Gene Name NA
Transcript ID TraesCS6A02G072500.1
Protein ID
Gene ID TraesCS6A02G072500
Gene Name
Pfam domain motif CDP-OH_P_transf
Motif E-value 7.20E-10
Motif start 47
Motif end 151
Protein seq >TraesCS6A02G072500.1
MGYVGSHGVATLRKYKYSGVDHSIVAKYILQPFWSRFVNVFPLWFPPNMITLTGFMFLLTSALLGFLYSPHLDTAPPRWV
HLAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGNATFWFWVISAVPFYFATWEHY
FTNTLVLPIVNGPTEGLMLIYVCHIVTFFTGAEWWAQDFRKSVPLLNWVPLVPEISLYGIVLFLMIAFAVIPTIGSNTHN
VYKVVEARKGSMVLALAMLFPFVVLMAGTLVWSYLSPSDIMRNQPHLLIIGTGFAFGYLVGRMILAHLCDEPKGLKTGMC
MALAYFPFAIANALTARLDDGNPLFDEQLVLLIYCLFTVALYMHFATSVIHEITNALGIHCFRITRKKA*
CDS seq >TraesCS6A02G072500.1
ATGGGGTACGTCGGGAGCCACGGCGTGGCGACGCTGCGCAAGTACAAGTACAGCGGCGTCGACCACTCCATCGTCGCCAA
GTACATCCTCCAGCCCTTCTGGTCGCGATTCGTCAACGTCTTCCCGCTCTGGTTCCCACCCAACATGATCACGCTGACAG
GTTTCATGTTTCTGCTGACATCGGCATTGCTTGGCTTTTTGTATTCACCTCATCTTGATACAGCGCCCCCTAGATGGGTT
CATCTTGCGCACGGAATCCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTC
ATCAAGTCCTTTAGGCGAACTTTTTGATCACGGATGTGACGCGCTTGCATGTGCTTTTGAGTCCCTGGCTTTTGGGAGCA
CAGCTATGTGTGGAAATGCTACCTTCTGGTTTTGGGTCATTTCAGCTGTCCCCTTCTACTTCGCAACCTGGGAACACTAT
TTTACAAATACACTTGTTCTTCCTATAGTCAATGGGCCGACTGAAGGCCTTATGCTGATCTATGTGTGCCATATCGTCAC
CTTTTTCACAGGAGCTGAATGGTGGGCACAGGATTTCCGAAAATCAGTGCCCCTCCTTAATTGGGTGCCTCTTGTTCCTG
AAATCTCGCTCTATGGCATTGTGCTGTTTCTAATGATTGCTTTTGCTGTAATTCCGACAATTGGATCTAACACTCACAAT
GTTTACAAAGTCGTCGAAGCAAGAAAAGGAAGTATGGTGCTGGCACTAGCAATGCTCTTCCCTTTCGTTGTACTCATGGC
TGGAACTCTCGTGTGGTCCTATCTATCTCCTTCAGATATAATGAGAAATCAACCACATCTGCTAATTATTGGAACTGGTT
TTGCGTTTGGCTATCTTGTGGGAAGAATGATTCTGGCTCACTTATGTGATGAACCCAAAGGTCTGAAGACAGGAATGTGC
ATGGCCCTGGCATATTTCCCGTTTGCAATTGCAAATGCGCTGACTGCCCGACTTGATGATGGAAACCCCCTTTTTGATGA
GCAGCTCGTTCTCCTGATATACTGCTTATTTACAGTGGCGCTGTACATGCATTTTGCTACGTCTGTTATCCATGAAATCA
CCAACGCACTTGGGATTCATTGCTTCAGAATCACAAGGAAAAAGGCGTAA
Ta_6A:39504771-39504780:- does not have available information here.