
Microexon ID | Sm_GL377625:10525-10534:+ |
Species | Selaginella moellendorffii | Coordinates | GL377625:10525..10534 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCGAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGAACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCTTGAGC |
Microexon-tag Amino Acid Seq | FQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLS |
Microexon-tag spanning region | 10403-10638 |
Microexon-tag prediction score | 0.9096 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ14843x |
Reference Transcript ID | EFJ14843 |
Gene ID | SELMODRAFT_156149 |
Gene Name | NA |
Transcript ID | EFJ14843 |
Protein ID | EFJ14843 |
Gene ID | SELMODRAFT_156149 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 7.8e-18 |
Motif start | 53 |
Motif end | 126 |
Protein seq | >EFJ14843 MVELNGGRYIGKHGLEALHRYKYSGVDKSYMAKYVFQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLSYVYSPHMDS PSPKWVHFLHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALSCAFETMAFGASVMSGSHTLWFWAIATVPFYM ATWEHYFTNTLILPEVNGPTEGLMLIYLIHFFTSLVGPVWWQHNFREAIPFLRGLPLLPDMPVNVFIIWLMLPVAVLPTI LSNVVNVYKVVHARKGSMLRALAMLVPFFVLLGSIVIWGWLSPTDVLRTQPHLMLLGSGFAFGYLVGRMILSHLCDEPKG LKTGMCLSLVLLPLAIANALSSKVLGGKPLFDEFLLLLVYCAYTMALYMHFAVSVIHEITGSLGIHCFRIKQKR* |
CDS seq | >EFJ14843 ATGGTTGAGCTAAACGGAGGTCGATACATCGGCAAGCATGGCCTGGAAGCACTGCACAGATATAAGTACAGCGGCGTGGA CAAATCTTACATGGCCAAGTACGTGTTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGA ACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCTTGAGCTATGTGTACTCTCCTCACATGGACTCT CCCAGTCCCAAATGGGTGCACTTCCTCCATGGGCTGCTTTTGTTTCTTTACCAGACGTTTGATGCGGTAGACGGTAAACA GGCGAGGCGAACCAATTCTTCCAGTCCTCTTGGAGAATTGTTTGACCATGGCTGCGATGCCCTCTCTTGTGCGTTCGAAA CGATGGCTTTCGGTGCTTCTGTTATGAGTGGATCGCATACTCTCTGGTTCTGGGCCATAGCAACTGTTCCTTTTTACATG GCTACCTGGGAGCACTACTTCACAAATACTTTGATTCTTCCTGAAGTCAATGGCCCCACTGAGGGTCTCATGTTGATCTA TCTGATTCATTTTTTCACATCTCTTGTTGGCCCTGTTTGGTGGCAGCACAACTTTAGAGAAGCCATACCGTTCCTGCGAG GTCTACCGCTACTTCCTGACATGCCGGTGAACGTTTTTATCATATGGTTAATGCTACCAGTTGCTGTTTTGCCAACCATT CTGTCTAACGTGGTCAATGTCTACAAAGTTGTTCACGCGCGTAAAGGAAGCATGCTGCGAGCTTTGGCCATGCTGGTGCC GTTCTTTGTGCTTCTTGGAAGCATTGTGATATGGGGCTGGCTGTCACCTACTGATGTGCTTCGCACCCAGCCACATCTCA TGCTATTGGGTTCGGGTTTTGCGTTCGGGTACTTGGTGGGAAGGATGATCCTGTCGCATCTCTGTGATGAGCCCAAAGGA CTAAAGACGGGCATGTGCCTGTCGTTAGTTCTCCTGCCACTTGCCATCGCCAATGCGCTCTCATCTAAAGTCCTTGGAGG GAAACCTTTATTCGACGAGTTCCTTTTGCTCCTTGTCTACTGTGCATACACAATGGCACTGTACATGCACTTTGCTGTTA GCGTCATACACGAGATCACGGGCTCGCTAGGCATCCACTGCTTCAGAATTAAGCAAAAGAGATGA |
Microexon DNA seq | ACCGAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGAACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCTTGAGC |
Microexon-tag Amino Acid seq | FQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLS |
Transcript ID | Sm.22527.1 |
Gene ID | Sm.22527 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 7.9e-18 |
Motif start | 53 |
Motif end | 126 |
Protein seq | >Sm.22527.1 MVELNGGRYIGKHGLEALHRYKYSGVDKSYMAKYVFQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLSYVYSPHMDS PSPKWVHFLHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALSCAFETMAFGASVMSGSHTLWFWAIATVPFYM ATWEHYFTNTLILPEVNGPTEGLMLIYLIHFFTSLVGPVWWQHNFREAIPFLRGLPLLPDMPVNVFIIWLMLPVAVLPTI LSNVVNVYKVVHARKGSMLRALAMLVPFFVLLGSIVIWGWLSPTDVLRTQPHLMLLGSGFAFGYLVGRMILSHLCDEPKG LKTGMCLSLVLLPLAIANALSSKVLGGKPLFDEFLLLLVYCAYTMALYMHFAVSVIHEITGSLGIHCFSITYVTHRTM* |
CDS seq | >Sm.22527.1 ATGGTTGAGCTAAACGGAGGTCGATACATCGGCAAGCATGGCCTGGAAGCACTGCACAGATATAAGTACAGCGGCGTGGA CAAATCTTACATGGCCAAGTACGTGTTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGA ACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCTTGAGCTATGTGTACTCTCCTCACATGGACTCT CCCAGTCCCAAATGGGTGCACTTCCTCCATGGGCTGCTTTTGTTTCTTTACCAGACGTTTGATGCGGTAGACGGTAAACA GGCGAGGCGAACCAATTCTTCCAGTCCTCTTGGAGAATTGTTTGACCATGGCTGCGATGCCCTCTCTTGTGCGTTCGAAA CGATGGCTTTCGGTGCTTCTGTTATGAGTGGATCGCATACTCTCTGGTTCTGGGCCATAGCAACTGTTCCTTTTTACATG GCTACCTGGGAGCACTACTTCACAAATACTTTGATTCTTCCTGAAGTCAATGGCCCCACTGAGGGTCTCATGTTGATCTA TCTGATTCATTTTTTCACATCTCTTGTTGGCCCTGTTTGGTGGCAGCACAACTTTAGAGAAGCCATACCGTTCCTGCGAG GTCTACCGCTACTTCCTGACATGCCGGTGAACGTTTTTATCATATGGTTAATGCTACCAGTTGCTGTTTTGCCAACCATT CTGTCTAACGTGGTCAATGTCTACAAAGTTGTTCACGCGCGTAAAGGAAGCATGCTGCGAGCTTTGGCCATGCTGGTGCC GTTCTTTGTGCTTCTTGGAAGCATTGTGATATGGGGCTGGCTGTCACCTACTGATGTGCTTCGCACCCAGCCACATCTCA TGCTATTGGGTTCGGGTTTTGCGTTCGGGTACTTGGTGGGAAGGATGATCCTGTCGCATCTCTGTGATGAGCCCAAAGGA CTAAAGACGGGCATGTGCCTGTCGTTAGTTCTCCTGCCACTTGCCATCGCCAATGCGCTCTCATCTAAAGTCCTTGGAGG GAAACCTTTATTCGACGAGTTCCTTTTGCTCCTTGTCTACTGTGCATACACAATGGCACTGTACATGCACTTTGCTGTTA GCGTCATACACGAGATCACGGGCTCGCTAGGCATCCACTGCTTCAGTATCACCTACGTGACACACCGAACCATGTGA |