
Microexon ID | Sm_GL377565:1615485-1615494:- |
Species | Selaginella moellendorffii | Coordinates | GL377565:1615485..1615494 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCGAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGAACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGC |
Microexon-tag Amino Acid Seq | FQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLS |
Microexon-tag spanning region | 1615381-1615616 |
Microexon-tag prediction score | 0.9138 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ38380x |
Reference Transcript ID | EFJ38380 |
Gene ID | SELMODRAFT_270170 |
Gene Name | NA |
Transcript ID | EFJ38380 |
Protein ID | EFJ38380 |
Gene ID | SELMODRAFT_270170 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 7.8e-18 |
Motif start | 53 |
Motif end | 126 |
Protein seq | >EFJ38380 MVELNGGRYIGKHGLEALHRYKYSGVDKSYMAKYVFQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLSYVYSPHMDS PSPKWVHFLHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALSCAFETMAFGASVMSGSHTLWFWAIATVPFYM ATWEHYFTNTLILPEVNGPTEGLMLIYLIHFFTSLVGPVWWQHNFREAIPFLRGLPLLPDMPVNVFIIWLMLPVAVLPTI LSNVINVYKVVHARKGSMLRALAMLVPFFVLLGSIVIWGWLSPTDVLRTQPHLMLLGSGFAFGYLVGRMILSHLCDEPKG LKTGMCLSLVLLPLAIANALSSKVLGGKPLFDEFLLLLVYCAYTMALYMHFAVSVIREITGSLGIHCFRIKQKR* |
CDS seq | >EFJ38380 ATGGTTGAGCTAAACGGAGGTCGATACATCGGCAAGCATGGCCTGGAAGCACTGCACAGATATAAGTACAGCGGCGTGGA CAAATCTTACATGGCCAAGTACGTGTTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGA ACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGCTATGTGTACTCTCCTCACATGGACTCC CCCAGTCCCAAATGGGTGCACTTCCTCCATGGGCTGCTTTTGTTTCTTTACCAGACGTTTGATGCGGTAGACGGTAAACA GGCGAGGCGAACCAATTCTTCCAGTCCTCTTGGAGAATTGTTTGACCATGGCTGCGATGCCCTCTCTTGTGCGTTCGAAA CGATGGCTTTCGGTGCTTCTGTTATGAGTGGATCGCATACTCTCTGGTTCTGGGCCATAGCAACTGTTCCTTTTTACATG GCTACCTGGGAGCACTACTTCACAAATACTTTGATTCTTCCTGAAGTCAATGGCCCCACTGAGGGTCTCATGTTGATCTA TCTGATTCATTTTTTCACATCTCTTGTTGGCCCTGTTTGGTGGCAGCACAACTTTAGAGAAGCCATACCGTTCCTGCGTG GTCTACCGCTACTTCCTGACATGCCGGTGAACGTTTTTATCATATGGTTAATGCTACCAGTTGCTGTTTTGCCAACCATT CTGTCTAACGTGATCAATGTCTACAAAGTTGTTCACGCGCGTAAAGGAAGCATGCTGCGAGCATTGGCCATGCTGGTGCC GTTCTTTGTGCTTCTTGGAAGCATTGTGATATGGGGTTGGCTGTCACCTACTGATGTGCTTCGCACCCAGCCACATCTCA TGCTATTGGGTTCGGGTTTTGCGTTCGGGTACTTGGTGGGAAGGATGATCCTGTCGCATCTCTGTGATGAGCCCAAAGGA CTAAAGACGGGCATGTGCCTGTCGTTAGTTCTCCTGCCACTTGCCATCGCCAATGCGCTCTCATCTAAAGTCCTTGGAGG GAAACCTTTATTCGACGAGTTCCTTTTGCTCCTTGTCTACTGTGCATACACAATGGCACTGTACATGCACTTTGCTGTTA GCGTCATACGCGAGATCACGGGCTCGCTAGGCATCCACTGCTTCAGAATTAAGCAAAAGAGATGA |
Microexon DNA seq | ACCGAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGAACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGC |
Microexon-tag Amino Acid seq | FQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLS |
Transcript ID | Sm.237.1 |
Gene ID | Sm.237 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 0.057 |
Motif start | 53 |
Motif end | 72 |
Protein seq | >Sm.237.1 MVELNGGRYIGKHGLEALHRYKYSGVDKSYMAKYVFQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLSYVSSPRFCL SGGGGM* |
CDS seq | >Sm.237.1 ATGGTTGAGCTAAACGGAGGTCGATACATCGGCAAGCATGGCCTGGAAGCACTGCACAGATATAAGTACAGCGGCGTGGA CAAATCTTACATGGCCAAGTACGTGTTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGA ACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGCTATGTAAGTTCTCCACGTTTTTGTTTG AGTGGTGGTGGGGGTATGTAG |