Microexon ID Sm_GL377565:1615485-1615494:-
Species Selaginella moellendorffii
Coordinates GL377565:1615485..1615494
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCGAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq TTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGAACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGC
Microexon-tag Amino Acid Seq FQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLS
Microexon-tag spanning region1615381-1615616
Microexon-tag prediction score0.9138
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ38380x
Reference Transcript ID EFJ38380
Gene ID SELMODRAFT_270170
Gene Name NA
Transcript ID EFJ38380
Protein ID EFJ38380
Gene ID SELMODRAFT_270170
Gene Name NA
Pfam domain motif CDP-OH_P_transf
Motif E-value 7.8e-18
Motif start 53
Motif end 126
Protein seq >EFJ38380
MVELNGGRYIGKHGLEALHRYKYSGVDKSYMAKYVFQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLSYVYSPHMDS
PSPKWVHFLHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALSCAFETMAFGASVMSGSHTLWFWAIATVPFYM
ATWEHYFTNTLILPEVNGPTEGLMLIYLIHFFTSLVGPVWWQHNFREAIPFLRGLPLLPDMPVNVFIIWLMLPVAVLPTI
LSNVINVYKVVHARKGSMLRALAMLVPFFVLLGSIVIWGWLSPTDVLRTQPHLMLLGSGFAFGYLVGRMILSHLCDEPKG
LKTGMCLSLVLLPLAIANALSSKVLGGKPLFDEFLLLLVYCAYTMALYMHFAVSVIREITGSLGIHCFRIKQKR*
CDS seq >EFJ38380
ATGGTTGAGCTAAACGGAGGTCGATACATCGGCAAGCATGGCCTGGAAGCACTGCACAGATATAAGTACAGCGGCGTGGA
CAAATCTTACATGGCCAAGTACGTGTTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGA
ACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGCTATGTGTACTCTCCTCACATGGACTCC
CCCAGTCCCAAATGGGTGCACTTCCTCCATGGGCTGCTTTTGTTTCTTTACCAGACGTTTGATGCGGTAGACGGTAAACA
GGCGAGGCGAACCAATTCTTCCAGTCCTCTTGGAGAATTGTTTGACCATGGCTGCGATGCCCTCTCTTGTGCGTTCGAAA
CGATGGCTTTCGGTGCTTCTGTTATGAGTGGATCGCATACTCTCTGGTTCTGGGCCATAGCAACTGTTCCTTTTTACATG
GCTACCTGGGAGCACTACTTCACAAATACTTTGATTCTTCCTGAAGTCAATGGCCCCACTGAGGGTCTCATGTTGATCTA
TCTGATTCATTTTTTCACATCTCTTGTTGGCCCTGTTTGGTGGCAGCACAACTTTAGAGAAGCCATACCGTTCCTGCGTG
GTCTACCGCTACTTCCTGACATGCCGGTGAACGTTTTTATCATATGGTTAATGCTACCAGTTGCTGTTTTGCCAACCATT
CTGTCTAACGTGATCAATGTCTACAAAGTTGTTCACGCGCGTAAAGGAAGCATGCTGCGAGCATTGGCCATGCTGGTGCC
GTTCTTTGTGCTTCTTGGAAGCATTGTGATATGGGGTTGGCTGTCACCTACTGATGTGCTTCGCACCCAGCCACATCTCA
TGCTATTGGGTTCGGGTTTTGCGTTCGGGTACTTGGTGGGAAGGATGATCCTGTCGCATCTCTGTGATGAGCCCAAAGGA
CTAAAGACGGGCATGTGCCTGTCGTTAGTTCTCCTGCCACTTGCCATCGCCAATGCGCTCTCATCTAAAGTCCTTGGAGG
GAAACCTTTATTCGACGAGTTCCTTTTGCTCCTTGTCTACTGTGCATACACAATGGCACTGTACATGCACTTTGCTGTTA
GCGTCATACGCGAGATCACGGGCTCGCTAGGCATCCACTGCTTCAGAATTAAGCAAAAGAGATGA
Microexon DNA seq ACCGAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq TTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGAACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGC
Microexon-tag Amino Acid seq FQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLS
Transcript ID Sm.237.1
Gene ID Sm.237
Gene Name NA
Pfam domain motif CDP-OH_P_transf
Motif E-value 0.057
Motif start 53
Motif end 72
Protein seq >Sm.237.1
MVELNGGRYIGKHGLEALHRYKYSGVDKSYMAKYVFQPFWSRFVNLFPLWMPPNMITLSGFLLVVASAFLSYVSSPRFCL
SGGGGM*
CDS seq >Sm.237.1
ATGGTTGAGCTAAACGGAGGTCGATACATCGGCAAGCATGGCCTGGAAGCACTGCACAGATATAAGTACAGCGGCGTGGA
CAAATCTTACATGGCCAAGTACGTGTTCCAGCCCTTCTGGTCGCGATTTGTCAACTTGTTCCCACTCTGGATGCCACCGA
ACATGATTACCTTGTCTGGATTTCTTCTCGTGGTGGCATCGGCGTTCCTGAGCTATGTAAGTTCTCCACGTTTTTGTTTG
AGTGGTGGTGGGGGTATGTAG