
Microexon ID | Sl_5:4684040-4684049:+ |
Species | Solanum Lycopersicum | Coordinates | 5:4684040..4684049 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCGAATATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTGCAACCCTTTTGGAGTCGCTGCGTCAATTTCTTCCCCCTTTGGATGCCACCGAATATGATTACGCTTACAGGATTTTTGTTCTTGGTCACATCTGCGTTGCTCGGA |
Microexon-tag Amino Acid Seq | MQPFWSRCVNFFPLWMPPNMITLTGFLFLVTSALLG |
Microexon-tag spanning region | 4683365-4684189 |
Microexon-tag prediction score | 0.9775 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc05g010440.2.1x |
Reference Transcript ID | Solyc05g010440.2.1 |
Gene ID | Solyc05g010440.2 |
Gene Name | NA |
Transcript ID | Solyc05g010440.2.1 |
Protein ID | |
Gene ID | Solyc05g010440.2 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Solyc05g010440.2.1 MGYIGAHGVQALHRYKYSGVDHSYVAKYVLQPFWSRCVNFFPLWMPPNMITLTGFLFLVTSALLGYIYSPLLDSPPPRWV NFAHGLLLFLYQVCLS* |
CDS seq | >Solyc05g010440.2.1 ATGGGTTACATAGGGGCTCATGGAGTGCAAGCCCTTCATAGGTACAAATACAGTGGGGTGGATCACTCCTATGTTGCGAA GTATGTGTTGCAACCCTTTTGGAGTCGCTGCGTCAATTTCTTCCCCCTTTGGATGCCACCGAATATGATTACGCTTACAG GATTTTTGTTCTTGGTCACATCTGCGTTGCTCGGATATATTTATTCTCCACTGTTGGATTCACCTCCTCCAAGATGGGTT AATTTTGCGCATGGATTGCTTCTCTTTCTGTATCAGGTTTGCCTGTCTTAG |
Sl_5:4684040-4684049:+ does not have available information here.