Microexon ID Sb_4:1307847-1307856:+
Species Sorghum   Bicolor
Coordinates 4:1307847..1307856
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCAAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq CTCCAGCCCTTCTGGTCCCGATTCGTCAACATCTTCCCGCTATGGTTCCCACCAAACATGATTACACTAACAGGCTTCATGTTTCTACTGACATCAGCATTCCTTGGC
Microexon-tag Amino Acid Seq LQPFWSRFVNIFPLWFPPNMITLTGFMFLLTSAFLG
Microexon-tag spanning region1306880-1307993
Microexon-tag prediction score0.9696
Overlapped with the annotated transcript (%) 100
New Transcript ID EES04384x
Reference Transcript ID EES04384
Gene ID SORBI_3004G016400
Gene Name NA
Transcript ID EES04384
Protein ID
Gene ID SORBI_3004G016400
Gene Name
Pfam domain motif CDP-OH_P_transf
Motif E-value 8.70E-10
Motif start 47
Motif end 150
Protein seq >EES04384
MGYIGHHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNIFPLWFPPNMITLTGFMFLLTSAFLGFLYSPHLDTAPPRWV
HLAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGKATFWFWFISAVPFYFATWEHF
FTNTLILPIVNGPTEGLMLIYLCHFFTFFTGAKWWAQDFQKSMPLLGWVPFISEIPVYDIVLCLMIAFAVIPTIASNIHN
VYKVVEARKGSMVLALAMLFPFGLLLAGVLVWSYFSPSDIMRNQPHLLIIGTGFAFGFLVGRMILAHLCDEPKGLKTGMC
MSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVALYMHFATSVIHEITNALGIHCFRITTKKA*
CDS seq >EES04384
ATGGGTTACATTGGCCACCACGGCGTCGCCACGCTGCGGCGCTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAA
GTACATCCTCCAGCCCTTCTGGTCCCGATTCGTCAACATCTTCCCGCTATGGTTCCCACCAAACATGATTACACTAACAG
GCTTCATGTTTCTACTGACATCAGCATTCCTTGGCTTTTTATATTCACCACATCTAGATACAGCACCCCCTAGATGGGTT
CACCTTGCTCATGGACTGCTTCTCTTCCTTTATCAGACTTTTGATGCTGTGGATGGAAAACAAGCAAGGCGTACCAACTC
ATCAAGTCCTCTAGGCGAGCTTTTTGACCACGGATGTGATGCGCTTGCCTGTGCTTTTGAGTCCTTGGCTTTTGGAAGCA
CGGCAATGTGTGGAAAGGCTACCTTCTGGTTTTGGTTCATTTCAGCTGTCCCATTTTACTTCGCAACCTGGGAACACTTT
TTTACAAATACACTTATTCTTCCTATAGTCAATGGACCAACTGAAGGCCTTATGCTGATCTACTTGTGCCATTTTTTCAC
CTTTTTCACAGGAGCCAAGTGGTGGGCACAGGATTTTCAGAAGTCAATGCCCCTGCTGGGTTGGGTTCCTTTTATATCTG
AAATCCCGGTGTATGACATTGTGCTATGTCTTATGATTGCTTTTGCTGTAATCCCAACAATTGCATCTAACATTCACAAT
GTATATAAAGTCGTTGAAGCAAGAAAAGGAAGTATGGTGCTGGCACTAGCCATGCTCTTTCCTTTTGGTTTGCTCTTGGC
TGGAGTTCTTGTCTGGTCCTACTTTTCTCCTTCAGATATAATGAGAAATCAACCACATTTGCTAATTATTGGAACTGGTT
TTGCATTTGGATTTCTTGTGGGGAGAATGATTCTGGCTCACTTATGTGATGAACCCAAAGGTCTCAAAACAGGGATGTGC
ATGTCCCTTGCGTATTTTCCATTTGCAATTGCAAATGCGCTGACTGCCCGGCTTGATGATGGAAATCCCCTTGTTGATGA
GCAGCTAGTTCTCCTGATGTACTGCTTATTTACAGTGGCTTTGTACATGCATTTTGCTACGTCTGTTATTCATGAGATCA
CCAATGCGCTTGGGATTCACTGTTTCAGGATCACTACGAAAAAGGCATAG
Sb_4:1307847-1307856:+ does not have available information here.