
Microexon ID | Sb_4:1307847-1307856:+ |
Species | Sorghum Bicolor | Coordinates | 4:1307847..1307856 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGTCCCGATTCGTCAACATCTTCCCGCTATGGTTCCCACCAAACATGATTACACTAACAGGCTTCATGTTTCTACTGACATCAGCATTCCTTGGC |
Microexon-tag Amino Acid Seq | LQPFWSRFVNIFPLWFPPNMITLTGFMFLLTSAFLG |
Microexon-tag spanning region | 1306880-1307993 |
Microexon-tag prediction score | 0.9696 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES04384x |
Reference Transcript ID | EES04384 |
Gene ID | SORBI_3004G016400 |
Gene Name | NA |
Transcript ID | EES04384 |
Protein ID | |
Gene ID | SORBI_3004G016400 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 8.70E-10 |
Motif start | 47 |
Motif end | 150 |
Protein seq | >EES04384 MGYIGHHGVATLRRYKYSGVDHSLVAKYILQPFWSRFVNIFPLWFPPNMITLTGFMFLLTSAFLGFLYSPHLDTAPPRWV HLAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGKATFWFWFISAVPFYFATWEHF FTNTLILPIVNGPTEGLMLIYLCHFFTFFTGAKWWAQDFQKSMPLLGWVPFISEIPVYDIVLCLMIAFAVIPTIASNIHN VYKVVEARKGSMVLALAMLFPFGLLLAGVLVWSYFSPSDIMRNQPHLLIIGTGFAFGFLVGRMILAHLCDEPKGLKTGMC MSLAYFPFAIANALTARLDDGNPLVDEQLVLLMYCLFTVALYMHFATSVIHEITNALGIHCFRITTKKA* |
CDS seq | >EES04384 ATGGGTTACATTGGCCACCACGGCGTCGCCACGCTGCGGCGCTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAA GTACATCCTCCAGCCCTTCTGGTCCCGATTCGTCAACATCTTCCCGCTATGGTTCCCACCAAACATGATTACACTAACAG GCTTCATGTTTCTACTGACATCAGCATTCCTTGGCTTTTTATATTCACCACATCTAGATACAGCACCCCCTAGATGGGTT CACCTTGCTCATGGACTGCTTCTCTTCCTTTATCAGACTTTTGATGCTGTGGATGGAAAACAAGCAAGGCGTACCAACTC ATCAAGTCCTCTAGGCGAGCTTTTTGACCACGGATGTGATGCGCTTGCCTGTGCTTTTGAGTCCTTGGCTTTTGGAAGCA CGGCAATGTGTGGAAAGGCTACCTTCTGGTTTTGGTTCATTTCAGCTGTCCCATTTTACTTCGCAACCTGGGAACACTTT TTTACAAATACACTTATTCTTCCTATAGTCAATGGACCAACTGAAGGCCTTATGCTGATCTACTTGTGCCATTTTTTCAC CTTTTTCACAGGAGCCAAGTGGTGGGCACAGGATTTTCAGAAGTCAATGCCCCTGCTGGGTTGGGTTCCTTTTATATCTG AAATCCCGGTGTATGACATTGTGCTATGTCTTATGATTGCTTTTGCTGTAATCCCAACAATTGCATCTAACATTCACAAT GTATATAAAGTCGTTGAAGCAAGAAAAGGAAGTATGGTGCTGGCACTAGCCATGCTCTTTCCTTTTGGTTTGCTCTTGGC TGGAGTTCTTGTCTGGTCCTACTTTTCTCCTTCAGATATAATGAGAAATCAACCACATTTGCTAATTATTGGAACTGGTT TTGCATTTGGATTTCTTGTGGGGAGAATGATTCTGGCTCACTTATGTGATGAACCCAAAGGTCTCAAAACAGGGATGTGC ATGTCCCTTGCGTATTTTCCATTTGCAATTGCAAATGCGCTGACTGCCCGGCTTGATGATGGAAATCCCCTTGTTGATGA GCAGCTAGTTCTCCTGATGTACTGCTTATTTACAGTGGCTTTGTACATGCATTTTGCTACGTCTGTTATTCATGAGATCA CCAATGCGCTTGGGATTCACTGTTTCAGGATCACTACGAAAAAGGCATAG |
Sb_4:1307847-1307856:+ does not have available information here.