
Microexon ID | Sb_10:6368508-6368517:- |
Species | Sorghum Bicolor | Coordinates | 10:6368508..6368517 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCAAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | CTCCAGCCCTTCTGGAGCCGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCAAACATGATCACACTTACAGGATTTTCGTTTCTAGTTCTATCAGCGCTGCTTGGC |
Microexon-tag Amino Acid Seq | LQPFWSRCVTLFPLWMPPNMITLTGFSFLVLSALLG |
Microexon-tag spanning region | 6368374-6369758 |
Microexon-tag prediction score | 0.9692 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG19557x |
Reference Transcript ID | KXG19557 |
Gene ID | SORBI_3010G077100 |
Gene Name | NA |
Transcript ID | KXG19557 |
Protein ID | |
Gene ID | SORBI_3010G077100 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 8.80E-07 |
Motif start | 46 |
Motif end | 188 |
Protein seq | >KXG19557 MGFIGAHGVETLKRYRYSGEDRSVVAKYVLQPFWSRCVTLFPLWMPPNMITLTGFSFLVLSALLGYIYSPRLDTAPPRWV HLAHGLLLFLYQTFDAVDGKQARRTSSSSPLGELFDHGCDALACAFEALALGSTLMCGGWTFWFWVVAAVPFYLATWEHF FTNTLILPTINGPTEGLMLIYVSHLFTFLTGAEWWAQDFRKSLPFLGWIPLPFLSEIKIPLYVLVLILMIVCAVIPTVRS NVSNVQEVVETRKGSMALALAMILPFITLLAGVAIWSYLSPSSIMRNQPHLLVIGTGFNFGYLVGRMILAHLCDEPKGLK SGMFMSLVFLCFPIANALIAKINNGTPLVDELVLLLLYCAYTVGLYLHLAVSVVHEIKDALGIYCFRITRKEA* |
CDS seq | >KXG19557 ATGGGGTTTATCGGCGCGCACGGCGTCGAGACGCTGAAGCGGTACAGGTACAGCGGGGAGGACCGCTCGGTGGTGGCCAA GTACGTGCTCCAGCCCTTCTGGAGCCGATGCGTCACCCTCTTCCCGCTCTGGATGCCACCAAACATGATCACACTTACAG GATTTTCGTTTCTAGTTCTATCAGCGCTGCTTGGCTATATATATTCGCCTCGCCTTGACACTGCTCCCCCTAGGTGGGTT CATCTTGCCCATGGATTACTCCTCTTCTTGTACCAGACTTTTGATGCTGTTGATGGTAAACAAGCGAGGCGTACTAGCTC ATCAAGCCCTCTTGGAGAACTTTTTGATCATGGATGTGATGCACTTGCCTGTGCTTTTGAAGCTTTGGCTCTTGGAAGCA CCTTGATGTGTGGAGGATGGACATTCTGGTTCTGGGTGGTTGCTGCTGTCCCGTTCTATCTTGCAACCTGGGAACACTTC TTTACAAATACACTCATTCTTCCTACAATAAATGGACCAACGGAGGGCCTGATGCTGATCTATGTATCCCATTTGTTTAC ATTTCTTACTGGCGCTGAATGGTGGGCACAGGATTTTCGGAAATCACTACCCTTTTTGGGTTGGATTCCACTTCCATTTC TTTCCGAAATCAAAATCCCCTTGTATGTTCTTGTGCTGATTCTTATGATTGTATGTGCTGTTATACCTACTGTTAGATCC AATGTCAGCAATGTCCAAGAGGTAGTTGAGACGCGAAAAGGAAGCATGGCATTAGCATTAGCCATGATCCTTCCTTTTAT TACACTGTTAGCTGGAGTTGCTATCTGGTCTTATCTTTCTCCTTCAAGTATAATGAGGAACCAACCACATTTGCTCGTAA TTGGAACTGGCTTTAATTTTGGATATTTGGTGGGAAGAATGATACTTGCTCATTTGTGTGACGAGCCCAAAGGTCTAAAA TCTGGGATGTTCATGTCTCTGGTGTTTCTTTGTTTTCCGATTGCAAATGCTCTCATTGCAAAGATCAACAATGGGACTCC TTTGGTTGATGAGCTTGTGCTGCTGCTTCTTTATTGTGCATATACAGTGGGTCTTTACCTACACCTTGCCGTCTCGGTTG TGCATGAAATCAAGGATGCTCTTGGAATCTATTGCTTCAGGATAACTAGGAAGGAGGCTTGA |
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