Microexon ID Pt_8:6965731-6965740:-
Species Populus   Trichocarpa
Coordinates 8:6965731..6965740
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCCGAATATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq TTGCAACCGTTTTGGGCTCGCTTTGTTAACCTCTTCCCTCTTTGGATGCCGCCGAATATGATTACGCTTATGGGATTTATGTTCTTAGTGACTTCGGCATTTCTCGGT
Microexon-tag Amino Acid Seq MQPFWARFVNLFPLWMPPNMITLMGFMFLVTSAFLG
Microexon-tag spanning region6965569-6965922
Microexon-tag prediction score0.9643
Overlapped with the annotated transcript (%) 100
New Transcript ID Potri.008G109833.1.v4.1x
Reference Transcript ID Potri.008G109833.1.v4.1
Gene ID Potri.008G109833.v4.1
Gene Name NA
Transcript ID Potri.008G109833.1.v4.1
Protein ID
Gene ID Potri.008G109833.v4.1
Gene Name
Pfam domain motif CDP-OH_P_transf
Motif E-value 1.80E-10
Motif start 46
Motif end 188
Protein seq >Potri.008G109833.1.v4.1
MGYIGSHGIAALHKYKYSGVDHSCVAKYVLQPFWARFVNLFPLWMPPNMITLMGFMFLVTSAFLGYIYSPRLDTPPPRWV
HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESMAFGSTAMCGRDTFWFWLISAVPFYCATWENF
FTNTLILPAINGPTEGLMLIYMAHFLTAVVGAGWWAQQFAMSFPFLSWLPFVSEIPTYRVVQFLMTAFAVIPTVGFNVSN
VYKVVQARKGSMLLALAMLYPFVVLVGGVLLWDYLSPSDLMSNYPHLVILGTGLAFGFLVGRMILSHLCDEPKGLKTNMC
MSLLYLPFAIANALAARLNDGVALVDEFWVLLGYCVFTMGLYLHLATSVIHEITTALGICCFRITRKKA*
CDS seq >Potri.008G109833.1.v4.1
ATGGGATATATAGGGTCACATGGAATAGCAGCACTGCACAAATACAAATACAGTGGAGTAGATCACTCTTGTGTTGCTAA
ATATGTTTTGCAACCGTTTTGGGCTCGCTTTGTTAACCTCTTCCCTCTTTGGATGCCGCCGAATATGATTACGCTTATGG
GATTTATGTTCTTAGTGACTTCGGCATTTCTCGGTTATATTTATTCACCTCGCTTGGATACGCCTCCGCCGAGATGGGTT
CATTTTGCGCACGGATTGCTTCTATTTTTATATCAGACTTTTGATGCTGTTGATGGAAAACAAGCTCGGCGGACAAACTC
GTCCAGTCCACTGGGGGAGCTTTTTGACCATGGATGTGATGCGCTTGCTTGTGCGTTCGAAAGCATGGCTTTTGGTAGCA
CTGCCATGTGTGGAAGAGATACTTTCTGGTTTTGGCTTATTTCAGCAGTTCCATTTTATTGTGCAACATGGGAAAACTTT
TTCACCAATACTCTTATTCTTCCAGCAATTAATGGACCTACAGAGGGTCTGATGCTAATATACATGGCTCATTTTCTTAC
AGCTGTAGTCGGTGCCGGGTGGTGGGCTCAACAGTTTGCGATGTCTTTCCCATTCTTGAGTTGGTTGCCATTTGTAAGTG
AAATCCCTACTTACAGAGTTGTGCAGTTTTTAATGACAGCTTTTGCTGTTATACCTACAGTGGGATTCAATGTGTCTAAT
GTCTACAAGGTTGTTCAAGCAAGAAAAGGCAGCATGTTGCTGGCTTTAGCAATGCTTTACCCTTTTGTTGTGCTCGTTGG
CGGAGTCCTATTGTGGGATTATCTGTCTCCATCTGATCTAATGTCAAACTATCCTCATTTGGTCATATTGGGAACTGGAC
TTGCATTTGGGTTTCTTGTGGGAAGGATGATTTTGTCTCACTTGTGTGATGAACCGAAGGGATTGAAAACCAACATGTGT
ATGTCTCTGTTATATCTACCATTTGCCATCGCAAATGCACTCGCAGCCAGACTGAATGATGGAGTTGCTTTAGTTGATGA
GTTCTGGGTTCTTCTTGGTTACTGTGTATTCACAATGGGACTCTATTTGCACTTAGCCACATCTGTCATCCATGAAATTA
CAACAGCTCTGGGAATATGCTGCTTCAGGATAACTAGGAAGAAGGCATGA
Pt_8:6965731-6965740:- does not have available information here.