Microexon ID Pt_10:14975655-14975664:-
Species Populus   Trichocarpa
Coordinates 10:14975655..14975664
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ACCGAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq TTGCAACCCTTTTGGAGCCGTTGTGTTAACTTCTTCCCTCTTTGGATGCCACCGAACATGATTACGCTTATGGGATTTATGTTCTTAGTGACTTCTGCTTTGCTCGGA
Microexon-tag Amino Acid Seq MQPFWSRCVNFFPLWMPPNMITLMGFMFLVTSALLG
Microexon-tag spanning region14975488-14975836
Microexon-tag prediction score0.9732
Overlapped with the annotated transcript (%) 100
New Transcript ID Potri.010G133800.1.v4.1x
Reference Transcript ID Potri.010G133800.1.v4.1
Gene ID Potri.010G133800.v4.1
Gene Name NA
Transcript ID Potri.010G133800.1.v4.1
Protein ID
Gene ID Potri.010G133800.v4.1
Gene Name
Pfam domain motif CDP-OH_P_transf
Motif E-value 4.30E-10
Motif start 46
Motif end 161
Protein seq >Potri.010G133800.1.v4.1
MGYIGSHGIAALHRYKYSGVDHSYVAKYVLQPFWSRCVNFFPLWMPPNMITLMGFMFLVTSALLGYIYSPRLDTPPPRWV
HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRDSFWFWLISAVPFYGATWEHF
FTNTLILPAVNGPTEGLMLIYVAHLFTALVGAEWWVQHFGMSFPFLSWVPFVSEIQTYRVVLLLMTAFAVIPTVAFNVSN
VYKVVQARKSSMLMALAMLYPFLVLVGGVLVWDYLSPSDLMANYPHLVVLGTGLAFGFLVGRMILSHLCDEPKGLKTNMC
LSLLYLPFAIANALAARLNDGVALVDEFWVLLGYCVFTMLLYLHFTTSVIHEITTALGICCFRITRKKA*
CDS seq >Potri.010G133800.1.v4.1
ATGGGATATATAGGATCACATGGAATAGCAGCACTTCACAGGTACAAATACAGTGGAGTAGATCACTCTTATGTTGCTAA
ATATGTTTTGCAACCCTTTTGGAGCCGTTGTGTTAACTTCTTCCCTCTTTGGATGCCACCGAACATGATTACGCTTATGG
GATTTATGTTCTTAGTGACTTCTGCTTTGCTCGGATATATATATTCACCTCGCTTGGATACGCCTCCACCAAGATGGGTT
CATTTTGCGCATGGATTGCTTCTATTTTTATATCAGACTTTTGATGCTGTTGATGGAAAGCAAGCGCGGCGGACAAACTC
GTCCAGTCCATTGGGGGAGCTTTTTGACCATGGATGTGATGCGCTCGCTTGTGCATTTGAAAGCTTGGCTTTTGGTAGCA
CTGCCATGTGTGGAAGAGATTCTTTCTGGTTCTGGCTTATTTCAGCTGTGCCATTTTATGGTGCAACATGGGAACACTTT
TTCACCAACACTCTCATTCTTCCAGCAGTTAATGGACCCACAGAGGGTCTGATGCTAATATATGTGGCACATTTGTTTAC
AGCCTTAGTTGGTGCTGAGTGGTGGGTTCAACACTTTGGGATGTCTTTCCCATTCTTGAGTTGGGTGCCATTTGTAAGTG
AAATCCAAACTTACAGAGTCGTGCTGTTATTAATGACAGCTTTTGCTGTTATACCCACAGTGGCATTCAACGTGTCCAAT
GTCTACAAGGTTGTTCAAGCAAGAAAGAGCAGCATGTTAATGGCTTTAGCAATGCTTTACCCTTTTCTTGTGCTCGTTGG
TGGGGTCCTAGTGTGGGATTATTTGTCTCCATCTGATCTAATGGCGAATTATCCTCATTTGGTTGTATTGGGAACTGGAC
TTGCATTTGGGTTTCTTGTGGGAAGGATGATTCTGTCTCACCTGTGTGATGAACCAAAGGGATTGAAAACCAACATGTGC
TTGTCTCTGTTATATCTACCATTTGCCATCGCAAATGCACTCGCAGCCAGACTGAATGATGGAGTTGCTTTAGTGGATGA
GTTCTGGGTTCTTCTTGGTTATTGTGTATTCACAATGCTACTCTATTTGCACTTCACCACATCTGTCATCCATGAAATTA
CAACAGCTCTGGGAATATGCTGCTTCAGGATAACTAGGAAGAAAGCATGA
Pt_10:14975655-14975664:- does not have available information here.