
Microexon ID | Pt_10:14975655-14975664:- |
Species | Populus Trichocarpa | Coordinates | 10:14975655..14975664 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCGAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTGCAACCCTTTTGGAGCCGTTGTGTTAACTTCTTCCCTCTTTGGATGCCACCGAACATGATTACGCTTATGGGATTTATGTTCTTAGTGACTTCTGCTTTGCTCGGA |
Microexon-tag Amino Acid Seq | MQPFWSRCVNFFPLWMPPNMITLMGFMFLVTSALLG |
Microexon-tag spanning region | 14975488-14975836 |
Microexon-tag prediction score | 0.9732 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.010G133800.1.v4.1x |
Reference Transcript ID | Potri.010G133800.1.v4.1 |
Gene ID | Potri.010G133800.v4.1 |
Gene Name | NA |
Transcript ID | Potri.010G133800.1.v4.1 |
Protein ID | |
Gene ID | Potri.010G133800.v4.1 |
Gene Name | |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 4.30E-10 |
Motif start | 46 |
Motif end | 161 |
Protein seq | >Potri.010G133800.1.v4.1 MGYIGSHGIAALHRYKYSGVDHSYVAKYVLQPFWSRCVNFFPLWMPPNMITLMGFMFLVTSALLGYIYSPRLDTPPPRWV HFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFESLAFGSTAMCGRDSFWFWLISAVPFYGATWEHF FTNTLILPAVNGPTEGLMLIYVAHLFTALVGAEWWVQHFGMSFPFLSWVPFVSEIQTYRVVLLLMTAFAVIPTVAFNVSN VYKVVQARKSSMLMALAMLYPFLVLVGGVLVWDYLSPSDLMANYPHLVVLGTGLAFGFLVGRMILSHLCDEPKGLKTNMC LSLLYLPFAIANALAARLNDGVALVDEFWVLLGYCVFTMLLYLHFTTSVIHEITTALGICCFRITRKKA* |
CDS seq | >Potri.010G133800.1.v4.1 ATGGGATATATAGGATCACATGGAATAGCAGCACTTCACAGGTACAAATACAGTGGAGTAGATCACTCTTATGTTGCTAA ATATGTTTTGCAACCCTTTTGGAGCCGTTGTGTTAACTTCTTCCCTCTTTGGATGCCACCGAACATGATTACGCTTATGG GATTTATGTTCTTAGTGACTTCTGCTTTGCTCGGATATATATATTCACCTCGCTTGGATACGCCTCCACCAAGATGGGTT CATTTTGCGCATGGATTGCTTCTATTTTTATATCAGACTTTTGATGCTGTTGATGGAAAGCAAGCGCGGCGGACAAACTC GTCCAGTCCATTGGGGGAGCTTTTTGACCATGGATGTGATGCGCTCGCTTGTGCATTTGAAAGCTTGGCTTTTGGTAGCA CTGCCATGTGTGGAAGAGATTCTTTCTGGTTCTGGCTTATTTCAGCTGTGCCATTTTATGGTGCAACATGGGAACACTTT TTCACCAACACTCTCATTCTTCCAGCAGTTAATGGACCCACAGAGGGTCTGATGCTAATATATGTGGCACATTTGTTTAC AGCCTTAGTTGGTGCTGAGTGGTGGGTTCAACACTTTGGGATGTCTTTCCCATTCTTGAGTTGGGTGCCATTTGTAAGTG AAATCCAAACTTACAGAGTCGTGCTGTTATTAATGACAGCTTTTGCTGTTATACCCACAGTGGCATTCAACGTGTCCAAT GTCTACAAGGTTGTTCAAGCAAGAAAGAGCAGCATGTTAATGGCTTTAGCAATGCTTTACCCTTTTCTTGTGCTCGTTGG TGGGGTCCTAGTGTGGGATTATTTGTCTCCATCTGATCTAATGGCGAATTATCCTCATTTGGTTGTATTGGGAACTGGAC TTGCATTTGGGTTTCTTGTGGGAAGGATGATTCTGTCTCACCTGTGTGATGAACCAAAGGGATTGAAAACCAACATGTGC TTGTCTCTGTTATATCTACCATTTGCCATCGCAAATGCACTCGCAGCCAGACTGAATGATGGAGTTGCTTTAGTGGATGA GTTCTGGGTTCTTCTTGGTTATTGTGTATTCACAATGCTACTCTATTTGCACTTCACCACATCTGTCATCCATGAAATTA CAACAGCTCTGGGAATATGCTGCTTCAGGATAACTAGGAAGAAAGCATGA |
Pt_10:14975655-14975664:- does not have available information here.