
Microexon ID | Pp_17:15286386-15286395:- |
Species | Physcomitrium patens | Coordinates | 17:15286386..15286395 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCCCAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGGGATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGT |
Microexon-tag Amino Acid Seq | FQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLS |
Microexon-tag spanning region | 15285914-15286777 |
Microexon-tag prediction score | 0.886 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c17_23500V3.1x |
Reference Transcript ID | Pp3c17_23500V3.1 |
Gene ID | Pp3c17_23500 |
Gene Name | NA |
Transcript ID | Pp3c17_23500V3.1 |
Protein ID | Pp3c17_23500V3.1 |
Gene ID | Pp3c17_23500 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 4.8e-17 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Pp3c17_23500V3.1 MGYVGKHGVEALHRYKYSGIDRSYMAKWVFQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLSYIYSPNLDAPAPRWV YFAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCSFETMAFASSVMSGKLSFWFWVIATIPFYGATWESY FTDTLILPEINGPTEGLMLIYCAHIFTGIVGPTWWTQSVKKVVPGLSMISFIPDVSVTVLVIFLMMAVAVTPTVGYNFVN VHKVVRGRGSSFRNALAMLFPFWTLVGSVIFWGWVSPSDIFRFQPHLLMMGTGFAFAYLVGRLILAHLCDEPKGLKTGMC TALLYLPFAISNALSATFFEGKPLVDETWVLVGYCAFTVCLYGHFVVSVIHEITEALGIHCFRIGKVKDGKGT* |
CDS seq | >Pp3c17_23500V3.1 ATGGGTTACGTAGGAAAGCATGGCGTCGAGGCGCTACACCGCTACAAGTACAGCGGGATCGATCGCTCCTACATGGCCAA ATGGGTCTTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGG GATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGTTATATTTATTCGCCGAATTTGGACGCACCTGCTCCTCGGTGGGTG TACTTTGCACATGGCATCCTTCTCTTTCTTTACCAGACTTTTGATGCTGTTGATGGCAAGCAAGCTAGGCGGACAAACTC TTCGAGCCCTCTCGGAGAGCTTTTTGATCACGGTTGTGATGCCCTCACTTGCTCGTTTGAAACTATGGCATTTGCATCCT CTGTGATGAGTGGCAAATTATCGTTCTGGTTTTGGGTAATTGCTACTATCCCTTTCTACGGTGCCACTTGGGAAAGTTAC TTCACAGATACACTCATCCTTCCAGAAATCAACGGTCCAACTGAAGGGCTGATGCTTATTTACTGTGCCCACATCTTTAC GGGAATTGTTGGTCCAACGTGGTGGACACAGAGTGTTAAGAAGGTTGTTCCAGGTCTGAGTATGATTTCGTTCATTCCAG ACGTATCTGTAACTGTGTTGGTCATCTTTTTAATGATGGCGGTGGCTGTTACCCCCACTGTGGGTTACAATTTTGTGAAC GTACACAAAGTGGTGAGGGGAAGAGGTTCCAGCTTTAGGAATGCCTTGGCCATGCTCTTTCCCTTTTGGACACTTGTAGG ATCAGTTATTTTCTGGGGTTGGGTATCACCTTCCGACATCTTCAGATTTCAACCACATTTGCTCATGATGGGAACTGGAT TCGCTTTCGCCTACCTAGTGGGTCGGCTAATTCTTGCTCACTTGTGTGATGAACCCAAGGGTTTGAAGACTGGAATGTGC ACGGCTTTATTGTACCTGCCTTTTGCGATTAGCAATGCTTTATCAGCGACGTTCTTTGAGGGTAAACCTCTCGTGGACGA GACTTGGGTCTTGGTTGGGTACTGTGCTTTTACAGTTTGTCTCTACGGCCACTTTGTTGTAAGTGTTATTCACGAGATCA CAGAGGCACTTGGCATCCATTGCTTTAGGATCGGTAAAGTTAAAGACGGGAAAGGAACCTAA |
Microexon DNA seq | TCCCAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGGGATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGT |
Microexon-tag Amino Acid seq | FQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLS |
Transcript ID | Pp3c17_23500V3.1 |
Gene ID | Pp.9164 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 4.8e-17 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Pp3c17_23500V3.1 MGYVGKHGVEALHRYKYSGIDRSYMAKWVFQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLSYIYSPNLDAPAPRWV YFAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCSFETMAFASSVMSGKLSFWFWVIATIPFYGATWESY FTDTLILPEINGPTEGLMLIYCAHIFTGIVGPTWWTQSVKKVVPGLSMISFIPDVSVTVLVIFLMMAVAVTPTVGYNFVN VHKVVRGRGSSFRNALAMLFPFWTLVGSVIFWGWVSPSDIFRFQPHLLMMGTGFAFAYLVGRLILAHLCDEPKGLKTGMC TALLYLPFAISNALSATFFEGKPLVDETWVLVGYCAFTVCLYGHFVVSVIHEITEALGIHCFRIGKVKDGKGT* |
CDS seq | >Pp3c17_23500V3.1 ATGGGTTACGTAGGAAAGCATGGCGTCGAGGCGCTACACCGCTACAAGTACAGCGGGATCGATCGCTCCTACATGGCCAA ATGGGTCTTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGG GATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGTTATATTTATTCGCCGAATTTGGACGCACCTGCTCCTCGGTGGGTG TACTTTGCACATGGCATCCTTCTCTTTCTTTACCAGACTTTTGATGCTGTTGATGGCAAGCAAGCTAGGCGGACAAACTC TTCGAGCCCTCTCGGAGAGCTTTTTGATCACGGTTGTGATGCCCTCACTTGCTCGTTTGAAACTATGGCATTTGCATCCT CTGTGATGAGTGGCAAATTATCGTTCTGGTTTTGGGTAATTGCTACTATCCCTTTCTACGGTGCCACTTGGGAAAGTTAC TTCACAGATACACTCATCCTTCCAGAAATCAACGGTCCAACTGAAGGGCTGATGCTTATTTACTGTGCCCACATCTTTAC GGGAATTGTTGGTCCAACGTGGTGGACACAGAGTGTTAAGAAGGTTGTTCCAGGTCTGAGTATGATTTCGTTCATTCCAG ACGTATCTGTAACTGTGTTGGTCATCTTTTTAATGATGGCGGTGGCTGTTACCCCCACTGTGGGTTACAATTTTGTGAAC GTACACAAAGTGGTGAGGGGAAGAGGTTCCAGCTTTAGGAATGCCTTGGCCATGCTCTTTCCCTTTTGGACACTTGTAGG ATCAGTTATTTTCTGGGGTTGGGTATCACCTTCCGACATCTTCAGATTTCAACCACATTTGCTCATGATGGGAACTGGAT TCGCTTTCGCCTACCTAGTGGGTCGGCTAATTCTTGCTCACTTGTGTGATGAACCCAAGGGTTTGAAGACTGGAATGTGC ACGGCTTTATTGTACCTGCCTTTTGCGATTAGCAATGCTTTATCAGCGACGTTCTTTGAGGGTAAACCTCTCGTGGACGA GACTTGGGTCTTGGTTGGGTACTGTGCTTTTACAGTTTGTCTCTACGGCCACTTTGTTGTAAGTGTTATTCACGAGATCA CAGAGGCACTTGGCATCCATTGCTTTAGGATCGGTAAAGTTAAAGACGGGAAAGGAACCTAA |