Microexon ID Pp_17:15286386-15286395:-
Species Physcomitrium patens
Coordinates 17:15286386..15286395
Microexon Cluster ID MEP25
Size 10
Phase 2
Pfam Domain Motif CDP-OH_P_transf
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,10,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCCCAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGGGATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGT
Microexon-tag Amino Acid Seq FQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLS
Microexon-tag spanning region15285914-15286777
Microexon-tag prediction score0.886
Overlapped with the annotated transcript (%) 100
New Transcript ID Pp3c17_23500V3.1x
Reference Transcript ID Pp3c17_23500V3.1
Gene ID Pp3c17_23500
Gene Name NA
Transcript ID Pp3c17_23500V3.1
Protein ID Pp3c17_23500V3.1
Gene ID Pp3c17_23500
Gene Name NA
Pfam domain motif CDP-OH_P_transf
Motif E-value 4.8e-17
Motif start 47
Motif end 120
Protein seq >Pp3c17_23500V3.1
MGYVGKHGVEALHRYKYSGIDRSYMAKWVFQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLSYIYSPNLDAPAPRWV
YFAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCSFETMAFASSVMSGKLSFWFWVIATIPFYGATWESY
FTDTLILPEINGPTEGLMLIYCAHIFTGIVGPTWWTQSVKKVVPGLSMISFIPDVSVTVLVIFLMMAVAVTPTVGYNFVN
VHKVVRGRGSSFRNALAMLFPFWTLVGSVIFWGWVSPSDIFRFQPHLLMMGTGFAFAYLVGRLILAHLCDEPKGLKTGMC
TALLYLPFAISNALSATFFEGKPLVDETWVLVGYCAFTVCLYGHFVVSVIHEITEALGIHCFRIGKVKDGKGT*
CDS seq >Pp3c17_23500V3.1
ATGGGTTACGTAGGAAAGCATGGCGTCGAGGCGCTACACCGCTACAAGTACAGCGGGATCGATCGCTCCTACATGGCCAA
ATGGGTCTTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGG
GATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGTTATATTTATTCGCCGAATTTGGACGCACCTGCTCCTCGGTGGGTG
TACTTTGCACATGGCATCCTTCTCTTTCTTTACCAGACTTTTGATGCTGTTGATGGCAAGCAAGCTAGGCGGACAAACTC
TTCGAGCCCTCTCGGAGAGCTTTTTGATCACGGTTGTGATGCCCTCACTTGCTCGTTTGAAACTATGGCATTTGCATCCT
CTGTGATGAGTGGCAAATTATCGTTCTGGTTTTGGGTAATTGCTACTATCCCTTTCTACGGTGCCACTTGGGAAAGTTAC
TTCACAGATACACTCATCCTTCCAGAAATCAACGGTCCAACTGAAGGGCTGATGCTTATTTACTGTGCCCACATCTTTAC
GGGAATTGTTGGTCCAACGTGGTGGACACAGAGTGTTAAGAAGGTTGTTCCAGGTCTGAGTATGATTTCGTTCATTCCAG
ACGTATCTGTAACTGTGTTGGTCATCTTTTTAATGATGGCGGTGGCTGTTACCCCCACTGTGGGTTACAATTTTGTGAAC
GTACACAAAGTGGTGAGGGGAAGAGGTTCCAGCTTTAGGAATGCCTTGGCCATGCTCTTTCCCTTTTGGACACTTGTAGG
ATCAGTTATTTTCTGGGGTTGGGTATCACCTTCCGACATCTTCAGATTTCAACCACATTTGCTCATGATGGGAACTGGAT
TCGCTTTCGCCTACCTAGTGGGTCGGCTAATTCTTGCTCACTTGTGTGATGAACCCAAGGGTTTGAAGACTGGAATGTGC
ACGGCTTTATTGTACCTGCCTTTTGCGATTAGCAATGCTTTATCAGCGACGTTCTTTGAGGGTAAACCTCTCGTGGACGA
GACTTGGGTCTTGGTTGGGTACTGTGCTTTTACAGTTTGTCTCTACGGCCACTTTGTTGTAAGTGTTATTCACGAGATCA
CAGAGGCACTTGGCATCCATTGCTTTAGGATCGGTAAAGTTAAAGACGGGAAAGGAACCTAA
Microexon DNA seq TCCCAACATG
Microexon Amino Acid seq PPNM
Microexon-tag DNA Seq TTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGGGATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGT
Microexon-tag Amino Acid seq FQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLS
Transcript ID Pp3c17_23500V3.1
Gene ID Pp.9164
Gene Name NA
Pfam domain motif CDP-OH_P_transf
Motif E-value 4.8e-17
Motif start 47
Motif end 120
Protein seq >Pp3c17_23500V3.1
MGYVGKHGVEALHRYKYSGIDRSYMAKWVFQPFWRFAVNFFPMWMPPNMITLMGFGMVLTSALLSYIYSPNLDAPAPRWV
YFAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCSFETMAFASSVMSGKLSFWFWVIATIPFYGATWESY
FTDTLILPEINGPTEGLMLIYCAHIFTGIVGPTWWTQSVKKVVPGLSMISFIPDVSVTVLVIFLMMAVAVTPTVGYNFVN
VHKVVRGRGSSFRNALAMLFPFWTLVGSVIFWGWVSPSDIFRFQPHLLMMGTGFAFAYLVGRLILAHLCDEPKGLKTGMC
TALLYLPFAISNALSATFFEGKPLVDETWVLVGYCAFTVCLYGHFVVSVIHEITEALGIHCFRIGKVKDGKGT*
CDS seq >Pp3c17_23500V3.1
ATGGGTTACGTAGGAAAGCATGGCGTCGAGGCGCTACACCGCTACAAGTACAGCGGGATCGATCGCTCCTACATGGCCAA
ATGGGTCTTCCAACCATTCTGGCGTTTCGCCGTCAATTTCTTTCCCATGTGGATGCCTCCCAACATGATTACTTTGATGG
GATTTGGCATGGTCCTCACTTCAGCGTTGCTGAGTTATATTTATTCGCCGAATTTGGACGCACCTGCTCCTCGGTGGGTG
TACTTTGCACATGGCATCCTTCTCTTTCTTTACCAGACTTTTGATGCTGTTGATGGCAAGCAAGCTAGGCGGACAAACTC
TTCGAGCCCTCTCGGAGAGCTTTTTGATCACGGTTGTGATGCCCTCACTTGCTCGTTTGAAACTATGGCATTTGCATCCT
CTGTGATGAGTGGCAAATTATCGTTCTGGTTTTGGGTAATTGCTACTATCCCTTTCTACGGTGCCACTTGGGAAAGTTAC
TTCACAGATACACTCATCCTTCCAGAAATCAACGGTCCAACTGAAGGGCTGATGCTTATTTACTGTGCCCACATCTTTAC
GGGAATTGTTGGTCCAACGTGGTGGACACAGAGTGTTAAGAAGGTTGTTCCAGGTCTGAGTATGATTTCGTTCATTCCAG
ACGTATCTGTAACTGTGTTGGTCATCTTTTTAATGATGGCGGTGGCTGTTACCCCCACTGTGGGTTACAATTTTGTGAAC
GTACACAAAGTGGTGAGGGGAAGAGGTTCCAGCTTTAGGAATGCCTTGGCCATGCTCTTTCCCTTTTGGACACTTGTAGG
ATCAGTTATTTTCTGGGGTTGGGTATCACCTTCCGACATCTTCAGATTTCAACCACATTTGCTCATGATGGGAACTGGAT
TCGCTTTCGCCTACCTAGTGGGTCGGCTAATTCTTGCTCACTTGTGTGATGAACCCAAGGGTTTGAAGACTGGAATGTGC
ACGGCTTTATTGTACCTGCCTTTTGCGATTAGCAATGCTTTATCAGCGACGTTCTTTGAGGGTAAACCTCTCGTGGACGA
GACTTGGGTCTTGGTTGGGTACTGTGCTTTTACAGTTTGTCTCTACGGCCACTTTGTTGTAAGTGTTATTCACGAGATCA
CAGAGGCACTTGGCATCCATTGCTTTAGGATCGGTAAAGTTAAAGACGGGAAAGGAACCTAA