
Microexon ID | Pp_14:16798817-16798826:- |
Species | Physcomitrium patens | Coordinates | 14:16798817..16798826 |
Microexon Cluster ID | MEP25 |
Size | 10 |
Phase | 2 |
Pfam Domain Motif | CDP-OH_P_transf |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,10,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YTSCARCCYTTYTGGASYCGHTKYGTYAMYYTCTTCCCYCTTTGGATGCCRCCAAAYATGATWACACTTAYRGGATTYATGTTYYTRSTBAYATCTGCAYTGCTTGGC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCCCAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAGCCATTCTGGCGCTTTGCCGTGAATTTCTTCCCCATGTGGATGCCTCCCAACATGATTACTTTGATGGGCTTTGGGATGATCCTTACTTCAGCGATGTTGAGC |
Microexon-tag Amino Acid Seq | FQPFWRFAVNFFPMWMPPNMITLMGFGMILTSAMLS |
Microexon-tag spanning region | 16798382-16799182 |
Microexon-tag prediction score | 0.883 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c14_26200V3.1x |
Reference Transcript ID | Pp3c14_26200V3.1 |
Gene ID | Pp3c14_26200 |
Gene Name | NA |
Transcript ID | Pp3c14_26200V3.1 |
Protein ID | Pp3c14_26200V3.1 |
Gene ID | Pp3c14_26200 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 1.4e-16 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Pp3c14_26200V3.1 MGYVSKHGVEALQRYKYSGIDRSYMAKWVFQPFWRFAVNFFPMWMPPNMITLMGFGMILTSAMLSYVYSPHLDAPLPRWV HFAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCSFENMAFASSVMAGKLSFWFWVIATIPFYGATWESF FTDTLILPEINGPTEGLMIIYCAHIFTGIVGPTWWTQSIKNAVPFLGMIPFIPDVSVTVVVIFLMMSVAVAPTVGYNFVN VYKVVRGRGTSFRTALAMLLPFWTLLGAVLFWGWTSPSDILRFQPHLVMMGAGFAFAYLVGRLILAHLCDEPKGLKTGMC TALLYLPFAIGNALSANYFNGEPLVDETWVLVGFCAFTASLYGHFVVSVIHEITEALGIHCFRIGKVKDGKGT* |
CDS seq | >Pp3c14_26200V3.1 ATGGGCTACGTCAGTAAGCATGGCGTCGAGGCGCTGCAGCGCTACAAGTACAGCGGGATCGATCGCTCTTACATGGCCAA ATGGGTTTTCCAGCCATTCTGGCGCTTTGCCGTGAATTTCTTCCCCATGTGGATGCCTCCCAACATGATTACTTTGATGG GCTTTGGGATGATCCTTACTTCAGCGATGTTGAGCTATGTTTATTCACCGCACTTGGATGCTCCACTTCCTCGGTGGGTG CACTTTGCACATGGCATCCTTCTCTTTCTTTACCAGACCTTTGATGCTGTTGATGGGAAACAAGCTAGGCGGACAAATTC GTCGAGTCCTCTTGGAGAACTTTTTGATCACGGTTGTGATGCCCTCACTTGCTCGTTTGAAAATATGGCTTTTGCATCCT CTGTGATGGCTGGCAAACTATCGTTCTGGTTCTGGGTGATTGCAACGATTCCTTTCTATGGTGCCACTTGGGAAAGTTTC TTCACAGATACGCTTATCCTTCCTGAAATCAATGGTCCAACTGAAGGGCTGATGATTATCTACTGCGCCCACATTTTTAC AGGAATCGTCGGCCCAACATGGTGGACACAAAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGCCCCTACTGTGGGCTACAATTTTGTGAAC GTCTACAAAGTTGTGAGGGGAAGAGGTACCAGTTTTAGAACGGCGTTGGCAATGCTCTTGCCATTTTGGACTCTTCTAGG AGCAGTTCTGTTCTGGGGGTGGACATCACCTTCTGATATCTTAAGGTTTCAACCACATTTGGTCATGATGGGAGCTGGAT TCGCCTTCGCTTACCTAGTGGGCCGACTAATTCTTGCACATCTATGTGATGAACCCAAAGGTTTGAAGACAGGAATGTGC ACGGCACTTTTGTACCTGCCTTTTGCGATTGGCAATGCACTGTCAGCAAATTATTTCAATGGTGAACCTCTTGTGGATGA GACTTGGGTCTTGGTTGGCTTCTGTGCTTTCACAGCTTCACTTTACGGCCACTTTGTTGTAAGTGTTATTCATGAGATTA CAGAGGCACTTGGCATCCATTGCTTCAGGATTGGTAAAGTCAAAGACGGGAAAGGAACCTAA |
Microexon DNA seq | TCCCAACATG |
Microexon Amino Acid seq | PPNM |
Microexon-tag DNA Seq | TTCCAGCCATTCTGGCGCTTTGCCGTGAATTTCTTCCCCATGTGGATGCCTCCCAACATGATTACTTTGATGGGCTTTGGGATGATCCTTACTTCAGCGATGTTGAGC |
Microexon-tag Amino Acid seq | FQPFWRFAVNFFPMWMPPNMITLMGFGMILTSAMLS |
Transcript ID | Pp3c14_26200V3.1 |
Gene ID | Pp.6335 |
Gene Name | NA |
Pfam domain motif | CDP-OH_P_transf |
Motif E-value | 1.4e-16 |
Motif start | 47 |
Motif end | 120 |
Protein seq | >Pp3c14_26200V3.1 MGYVSKHGVEALQRYKYSGIDRSYMAKWVFQPFWRFAVNFFPMWMPPNMITLMGFGMILTSAMLSYVYSPHLDAPLPRWV HFAHGILLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALTCSFENMAFASSVMAGKLSFWFWVIATIPFYGATWESF FTDTLILPEINGPTEGLMIIYCAHIFTGIVGPTWWTQSIKNAVPFLGMIPFIPDVSVTVVVIFLMMSVAVAPTVGYNFVN VYKVVRGRGTSFRTALAMLLPFWTLLGAVLFWGWTSPSDILRFQPHLVMMGAGFAFAYLVGRLILAHLCDEPKGLKTGMC TALLYLPFAIGNALSANYFNGEPLVDETWVLVGFCAFTASLYGHFVVSVIHEITEALGIHCFRIGKVKDGKGT* |
CDS seq | >Pp3c14_26200V3.1 ATGGGCTACGTCAGTAAGCATGGCGTCGAGGCGCTGCAGCGCTACAAGTACAGCGGGATCGATCGCTCTTACATGGCCAA ATGGGTTTTCCAGCCATTCTGGCGCTTTGCCGTGAATTTCTTCCCCATGTGGATGCCTCCCAACATGATTACTTTGATGG GCTTTGGGATGATCCTTACTTCAGCGATGTTGAGCTATGTTTATTCACCGCACTTGGATGCTCCACTTCCTCGGTGGGTG CACTTTGCACATGGCATCCTTCTCTTTCTTTACCAGACCTTTGATGCTGTTGATGGGAAACAAGCTAGGCGGACAAATTC GTCGAGTCCTCTTGGAGAACTTTTTGATCACGGTTGTGATGCCCTCACTTGCTCGTTTGAAAATATGGCTTTTGCATCCT CTGTGATGGCTGGCAAACTATCGTTCTGGTTCTGGGTGATTGCAACGATTCCTTTCTATGGTGCCACTTGGGAAAGTTTC TTCACAGATACGCTTATCCTTCCTGAAATCAATGGTCCAACTGAAGGGCTGATGATTATCTACTGCGCCCACATTTTTAC AGGAATCGTCGGCCCAACATGGTGGACACAAAGTATTAAGAATGCCGTTCCATTTCTGGGGATGATTCCATTCATTCCAG ATGTATCTGTGACTGTAGTAGTCATCTTTTTGATGATGTCGGTGGCAGTTGCCCCTACTGTGGGCTACAATTTTGTGAAC GTCTACAAAGTTGTGAGGGGAAGAGGTACCAGTTTTAGAACGGCGTTGGCAATGCTCTTGCCATTTTGGACTCTTCTAGG AGCAGTTCTGTTCTGGGGGTGGACATCACCTTCTGATATCTTAAGGTTTCAACCACATTTGGTCATGATGGGAGCTGGAT TCGCCTTCGCTTACCTAGTGGGCCGACTAATTCTTGCACATCTATGTGATGAACCCAAAGGTTTGAAGACAGGAATGTGC ACGGCACTTTTGTACCTGCCTTTTGCGATTGGCAATGCACTGTCAGCAAATTATTTCAATGGTGAACCTCTTGTGGATGA GACTTGGGTCTTGGTTGGCTTCTGTGCTTTCACAGCTTCACTTTACGGCCACTTTGTTGTAAGTGTTATTCATGAGATTA CAGAGGCACTTGGCATCCATTGCTTCAGGATTGGTAAAGTCAAAGACGGGAAAGGAACCTAA |